Wall clock time and date at job start Sat Mar 6 2021 20:21:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35982 * 117.00045 * 2 1 4 4 C 1.38675 * 120.00040 * 179.97438 * 3 2 1 5 5 C 1.38156 * 119.99932 * 179.97438 * 4 3 2 6 6 C 1.50693 * 120.00043 * 179.97438 * 5 4 3 7 7 O 1.42900 * 109.47188 * 105.02032 * 6 5 4 8 8 Si 1.86301 * 109.47214 * 345.02159 * 6 5 4 9 9 C 1.38674 * 119.99894 * 359.97438 * 5 4 3 10 10 O 1.35987 * 120.00183 * 180.02562 * 9 5 4 11 11 C 1.42895 * 117.00235 * 180.02562 * 10 9 5 12 12 C 1.50697 * 109.47250 * 180.02562 * 11 10 9 13 13 O 1.21288 * 120.00017 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00270 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00270 * 180.02562 * 14 12 11 16 16 H 1.09002 * 109.47129 * 34.99540 * 15 14 12 17 17 C 1.52997 * 109.47473 * 154.99797 * 15 14 12 18 18 C 1.53000 * 109.47060 * 180.02562 * 17 15 14 19 19 C 1.53002 * 109.47233 * 299.99657 * 18 17 15 20 20 H 1.09002 * 109.47075 * 300.00932 * 19 18 17 21 21 C 1.52997 * 109.47415 * 180.02562 * 19 18 17 22 22 F 1.39898 * 109.47062 * 60.00257 * 21 19 18 23 23 F 1.39900 * 109.47435 * 180.02562 * 21 19 18 24 24 F 1.39905 * 109.46849 * 300.00430 * 21 19 18 25 25 C 1.52997 * 109.46817 * 60.00194 * 19 18 17 26 26 C 1.52999 * 109.46944 * 275.00142 * 15 14 12 27 27 C 1.38727 * 120.00036 * 0.27739 * 9 5 4 28 28 C 1.38101 * 119.99807 * 359.44875 * 27 9 5 29 29 H 1.08999 * 109.46968 * 60.00337 * 1 2 3 30 30 H 1.09003 * 109.46758 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47430 * 299.99984 * 1 2 3 32 32 H 1.07994 * 120.00279 * 359.97438 * 4 3 2 33 33 H 1.08999 * 109.47671 * 225.02095 * 6 5 4 34 34 H 0.96708 * 113.99522 * 60.00254 * 7 6 5 35 35 H 1.48504 * 110.00033 * 178.67877 * 8 6 5 36 36 H 1.48497 * 109.99963 * 300.00182 * 8 6 5 37 37 H 1.08995 * 109.47481 * 60.00115 * 11 10 9 38 38 H 1.09005 * 109.46791 * 300.00031 * 11 10 9 39 39 H 0.97000 * 120.00239 * 359.97438 * 14 12 11 40 40 H 1.09002 * 109.47153 * 59.99757 * 17 15 14 41 41 H 1.09001 * 109.46832 * 299.99948 * 17 15 14 42 42 H 1.08992 * 109.47399 * 59.99823 * 18 17 15 43 43 H 1.09004 * 109.46724 * 180.02562 * 18 17 15 44 44 H 1.09002 * 109.47153 * 60.00231 * 25 19 18 45 45 H 1.09001 * 109.47289 * 180.02562 * 25 19 18 46 46 H 1.09000 * 109.47486 * 59.99569 * 26 15 14 47 47 H 1.09002 * 109.46716 * 299.99651 * 26 15 14 48 48 H 1.07999 * 119.99538 * 179.70764 * 27 9 5 49 49 H 1.08000 * 120.00047 * 180.27742 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2842 0.0005 5 6 4.0584 2.5152 0.0000 6 6 5.5633 2.5941 0.0012 7 8 6.0218 2.9666 -1.3000 8 14 6.2719 0.9325 0.4571 9 6 3.3031 3.6782 -0.0016 10 8 3.9204 4.8898 -0.0027 11 6 3.0805 6.0459 -0.0037 12 6 3.9346 7.2874 -0.0054 13 8 5.1437 7.1917 -0.0052 14 7 3.3550 8.5042 -0.0061 15 6 4.1853 9.7111 -0.0084 16 1 5.0842 9.5327 -0.5985 17 6 3.3968 10.8716 -0.6184 18 6 4.2643 12.1319 -0.6213 19 6 4.6589 12.4827 0.8147 20 1 3.7603 12.6614 1.4052 21 6 5.5259 13.7434 0.8120 22 9 4.8043 14.8043 0.2543 23 9 5.8872 14.0638 2.1250 24 9 6.6793 13.5144 0.0540 25 6 5.4475 11.3222 1.4248 26 6 4.5795 10.0616 1.4278 27 6 1.9178 3.6055 0.0031 28 6 1.2908 2.3750 -0.0020 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 4.0195 0.3785 0.0014 33 1 5.8876 3.3391 0.7277 34 1 5.6913 3.8234 -1.6030 35 1 7.7557 0.9886 0.4308 36 1 5.8026 0.5337 1.8083 37 1 2.4512 6.0386 0.8862 38 1 2.4513 6.0369 -0.8938 39 1 2.3880 8.5808 -0.0059 40 1 2.4979 11.0501 -0.0283 41 1 3.1160 10.6219 -1.6416 42 1 5.1628 11.9532 -1.2117 43 1 3.7022 12.9588 -1.0555 44 1 6.3461 11.1435 0.8344 45 1 5.7283 11.5719 2.4480 46 1 5.1414 9.2348 1.8625 47 1 3.6807 10.2400 2.0180 48 1 1.3296 4.5113 0.0066 49 1 0.2123 2.3185 -0.0029 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:21:23 Heat of formation + Delta-G solvation = -274.930420 kcal Electronic energy + Delta-G solvation = -36597.564090 eV Core-core repulsion = 31076.648233 eV Total energy + Delta-G solvation = -5520.915857 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.153 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -51.09681 -48.57991 -48.55397 -41.88975 -41.22056 -40.14261 -39.28543 -37.99873 -36.85515 -35.69180 -32.82849 -32.21823 -32.17165 -30.92536 -29.35877 -28.10972 -26.51418 -26.39468 -24.23870 -23.91102 -22.92948 -22.41119 -21.74840 -21.32852 -19.56950 -19.35912 -19.25036 -18.83937 -18.74543 -18.53075 -17.91111 -17.59659 -17.39787 -17.33411 -16.71980 -16.20859 -16.01033 -15.80206 -15.65697 -15.58513 -15.36468 -15.34735 -15.17871 -15.04480 -14.95849 -14.74866 -14.72270 -14.62946 -14.44135 -14.17172 -14.07292 -13.84307 -13.72032 -13.64765 -13.54783 -13.44674 -13.10412 -12.76439 -12.64966 -12.49906 -12.28077 -12.20865 -11.87981 -11.87526 -11.65795 -11.54457 -11.17302 -11.03256 -10.93776 -10.32262 -10.09228 -8.84371 -4.75461 0.05439 0.32647 1.29213 1.36377 1.52395 1.71711 1.77818 2.13423 2.23546 2.41884 2.54041 2.73972 2.85126 2.93570 3.28963 3.39965 3.47350 3.52197 3.62039 3.69257 3.70031 3.76933 3.82307 3.89048 3.94104 3.98014 4.04053 4.06392 4.09522 4.10264 4.11956 4.15835 4.31765 4.33000 4.41590 4.43764 4.51914 4.62503 4.66276 4.67799 4.77166 4.82900 4.94440 5.00388 5.00740 5.08458 5.16470 5.21685 5.38298 6.02746 6.21201 6.36241 6.72693 6.96269 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.104 3.896 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.099 3.901 10 O -0.290 6.290 11 C 0.041 3.959 12 C 0.517 3.483 13 O -0.509 6.509 14 N -0.725 5.725 15 C 0.144 3.856 16 H 0.095 0.905 17 C -0.122 4.122 18 C -0.116 4.116 19 C -0.134 4.134 20 H 0.117 0.883 21 C 0.453 3.547 22 F -0.183 7.183 23 F -0.183 7.183 24 F -0.181 7.181 25 C -0.117 4.117 26 C -0.126 4.126 27 C -0.165 4.165 28 C -0.165 4.165 29 H 0.056 0.944 30 H 0.103 0.897 31 H 0.055 0.945 32 H 0.147 0.853 33 H 0.078 0.922 34 H 0.368 0.632 35 H -0.254 1.254 36 H -0.251 1.251 37 H 0.093 0.907 38 H 0.095 0.905 39 H 0.402 0.598 40 H 0.075 0.925 41 H 0.081 0.919 42 H 0.082 0.918 43 H 0.085 0.915 44 H 0.081 0.919 45 H 0.082 0.918 46 H 0.078 0.922 47 H 0.070 0.930 48 H 0.133 0.867 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.379 -0.142 -0.529 9.395 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.059 3.941 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.180 4.180 7 O -0.338 6.338 8 Si 0.641 3.359 9 C 0.054 3.946 10 O -0.203 6.203 11 C -0.038 4.038 12 C 0.301 3.699 13 O -0.382 6.382 14 N -0.378 5.378 15 C 0.040 3.960 16 H 0.113 0.887 17 C -0.160 4.160 18 C -0.154 4.154 19 C -0.153 4.153 20 H 0.135 0.865 21 C 0.399 3.601 22 F -0.165 7.165 23 F -0.164 7.164 24 F -0.162 7.162 25 C -0.155 4.155 26 C -0.164 4.164 27 C -0.184 4.184 28 C -0.184 4.184 29 H 0.075 0.925 30 H 0.122 0.878 31 H 0.074 0.926 32 H 0.164 0.836 33 H 0.096 0.904 34 H 0.216 0.784 35 H -0.179 1.179 36 H -0.175 1.175 37 H 0.111 0.889 38 H 0.112 0.888 39 H 0.237 0.763 40 H 0.094 0.906 41 H 0.100 0.900 42 H 0.101 0.899 43 H 0.104 0.896 44 H 0.100 0.900 45 H 0.101 0.899 46 H 0.097 0.903 47 H 0.089 0.911 48 H 0.151 0.849 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -7.363 -1.358 0.069 7.488 hybrid contribution -1.439 2.397 0.429 2.828 sum -8.802 1.038 0.498 8.877 Atomic orbital electron populations 1.23104 0.78053 1.04416 1.01316 1.86117 1.21551 1.26169 1.88865 1.18814 0.91912 0.84583 0.98832 1.20062 0.91644 0.96784 1.03597 1.19482 0.96618 0.90030 1.03795 1.25366 0.91469 1.12365 0.88828 1.86712 1.73743 1.41926 1.31464 0.93016 0.79792 0.80261 0.82797 1.18654 0.90820 0.84564 1.00549 1.86111 1.33870 1.11071 1.89291 1.22449 0.93178 0.84152 1.04017 1.20035 0.88863 0.84182 0.76795 1.90802 1.14076 1.86488 1.46849 1.45858 1.10506 1.05002 1.76449 1.21086 0.94897 0.83075 0.96985 0.88676 1.21748 0.98590 0.93286 1.02334 1.21565 1.01622 0.98582 0.93664 1.22567 0.99562 0.91764 1.01434 0.86530 1.20592 0.79744 0.86244 0.73522 1.93193 1.77595 1.60183 1.85498 1.93196 1.92509 1.93889 1.36824 1.93191 1.52168 1.94541 1.76350 1.21594 0.98782 0.92770 1.02393 1.21892 1.00332 0.97540 0.96678 1.21013 0.92813 0.98685 1.05874 1.21082 1.00333 0.91510 1.05470 0.92537 0.87848 0.92620 0.83628 0.90419 0.78395 1.17887 1.17523 0.88891 0.88756 0.76332 0.90622 0.90030 0.89904 0.89633 0.89985 0.89903 0.90297 0.91082 0.84930 0.84696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.33 10.50 -19.68 -0.21 -0.54 16 3 C 0.10 0.13 6.69 -39.24 -0.26 -0.13 16 4 C -0.10 -0.17 8.59 -39.45 -0.34 -0.51 16 5 C -0.10 -0.22 5.28 -104.49 -0.55 -0.77 16 6 C -0.07 -0.20 2.33 36.00 0.08 -0.12 16 7 O -0.53 -1.96 12.65 -35.23 -0.45 -2.41 16 8 Si 0.74 1.23 30.17 -169.99 -5.13 -3.90 16 9 C 0.10 0.14 6.62 -39.24 -0.26 -0.12 16 10 O -0.29 -0.45 8.56 -39.61 -0.34 -0.79 16 11 C 0.04 -0.09 5.22 36.00 0.19 0.10 16 12 C 0.52 -0.13 7.87 -10.99 -0.09 -0.22 16 13 O -0.51 -2.36 16.16 -14.36 -0.23 -2.59 16 14 N -0.72 2.51 5.08 -53.81 -0.27 2.23 16 15 C 0.14 -0.39 2.45 -67.93 -0.17 -0.56 16 16 H 0.10 -0.04 7.58 -51.93 -0.39 -0.44 16 17 C -0.12 0.56 5.39 -26.73 -0.14 0.42 16 18 C -0.12 0.40 4.96 -26.73 -0.13 0.27 16 19 C -0.13 0.36 2.16 -90.62 -0.20 0.16 16 20 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 21 C 0.45 0.02 2.69 37.16 0.10 0.12 16 22 F -0.18 -0.18 16.80 2.25 0.04 -0.15 16 23 F -0.18 -0.25 16.80 2.25 0.04 -0.22 16 24 F -0.18 -0.25 16.28 2.25 0.04 -0.21 16 25 C -0.12 0.25 4.96 -26.70 -0.13 0.12 16 26 C -0.13 0.30 5.50 -26.70 -0.15 0.16 16 27 C -0.17 0.10 9.03 -39.45 -0.36 -0.25 16 28 C -0.17 0.06 9.03 -39.45 -0.36 -0.30 16 29 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 30 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 31 H 0.06 -0.19 7.66 -51.93 -0.40 -0.58 16 32 H 0.15 0.01 5.13 -52.49 -0.27 -0.26 16 33 H 0.08 0.28 7.82 -51.93 -0.41 -0.13 16 34 H 0.37 0.83 8.59 45.56 0.39 1.23 16 35 H -0.25 -1.12 7.11 56.52 0.40 -0.72 16 36 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 37 H 0.09 -0.42 7.65 -51.93 -0.40 -0.81 16 38 H 0.09 -0.44 7.67 -51.93 -0.40 -0.84 16 39 H 0.40 -2.66 8.60 -40.82 -0.35 -3.01 16 40 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 41 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 42 H 0.08 -0.22 7.80 -51.93 -0.41 -0.63 16 43 H 0.09 -0.31 7.80 -51.93 -0.41 -0.72 16 44 H 0.08 -0.10 7.80 -51.93 -0.41 -0.51 16 45 H 0.08 -0.16 7.80 -51.93 -0.41 -0.57 16 46 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 47 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 48 H 0.13 -0.48 6.29 -52.49 -0.33 -0.81 16 49 H 0.14 -0.36 6.29 -52.49 -0.33 -0.69 16 LS Contribution 406.80 15.07 6.13 6.13 Total: 0.00 -9.24 406.80 -8.78 -18.03 By element: Atomic # 1 Polarization: -8.25 SS G_CDS: -6.63 Total: -14.89 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -1.77 Total: -0.70 kcal Atomic # 7 Polarization: 2.51 SS G_CDS: -0.27 Total: 2.23 kcal Atomic # 8 Polarization: -5.10 SS G_CDS: -1.22 Total: -6.33 kcal Atomic # 9 Polarization: -0.69 SS G_CDS: 0.11 Total: -0.57 kcal Atomic # 14 Polarization: 1.23 SS G_CDS: -5.13 Total: -3.90 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -9.24 -8.78 -18.03 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -256.904 kcal (2) G-P(sol) polarization free energy of solvation -9.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -266.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.784 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.027 kcal (6) G-S(sol) free energy of system = (1) + (5) -274.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds