Wall clock time and date at job start Sat Mar 6 2021 20:21:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35982 * 117.00045 * 2 1 4 4 C 1.38675 * 120.00040 * 179.97438 * 3 2 1 5 5 C 1.38156 * 119.99932 * 179.97438 * 4 3 2 6 6 C 1.50693 * 120.00043 * 179.97438 * 5 4 3 7 7 O 1.42900 * 109.47188 * 105.02032 * 6 5 4 8 8 Si 1.86301 * 109.47214 * 345.02159 * 6 5 4 9 9 C 1.38674 * 119.99894 * 359.97438 * 5 4 3 10 10 O 1.35987 * 120.00183 * 180.02562 * 9 5 4 11 11 C 1.42895 * 117.00235 * 180.02562 * 10 9 5 12 12 C 1.50697 * 109.47250 * 180.02562 * 11 10 9 13 13 O 1.21288 * 120.00017 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00270 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00270 * 180.02562 * 14 12 11 16 16 H 1.09002 * 109.47129 * 34.99540 * 15 14 12 17 17 C 1.52997 * 109.47473 * 154.99797 * 15 14 12 18 18 C 1.53000 * 109.47060 * 180.02562 * 17 15 14 19 19 C 1.53002 * 109.47233 * 299.99657 * 18 17 15 20 20 H 1.09002 * 109.47075 * 300.00932 * 19 18 17 21 21 C 1.52997 * 109.47415 * 180.02562 * 19 18 17 22 22 F 1.39898 * 109.47062 * 60.00257 * 21 19 18 23 23 F 1.39900 * 109.47435 * 180.02562 * 21 19 18 24 24 F 1.39905 * 109.46849 * 300.00430 * 21 19 18 25 25 C 1.52997 * 109.46817 * 60.00194 * 19 18 17 26 26 C 1.52999 * 109.46944 * 275.00142 * 15 14 12 27 27 C 1.38727 * 120.00036 * 0.27739 * 9 5 4 28 28 C 1.38101 * 119.99807 * 359.44875 * 27 9 5 29 29 H 1.08999 * 109.46968 * 60.00337 * 1 2 3 30 30 H 1.09003 * 109.46758 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47430 * 299.99984 * 1 2 3 32 32 H 1.07994 * 120.00279 * 359.97438 * 4 3 2 33 33 H 1.08999 * 109.47671 * 225.02095 * 6 5 4 34 34 H 0.96708 * 113.99522 * 60.00254 * 7 6 5 35 35 H 1.48504 * 110.00033 * 178.67877 * 8 6 5 36 36 H 1.48497 * 109.99963 * 300.00182 * 8 6 5 37 37 H 1.08995 * 109.47481 * 60.00115 * 11 10 9 38 38 H 1.09005 * 109.46791 * 300.00031 * 11 10 9 39 39 H 0.97000 * 120.00239 * 359.97438 * 14 12 11 40 40 H 1.09002 * 109.47153 * 59.99757 * 17 15 14 41 41 H 1.09001 * 109.46832 * 299.99948 * 17 15 14 42 42 H 1.08992 * 109.47399 * 59.99823 * 18 17 15 43 43 H 1.09004 * 109.46724 * 180.02562 * 18 17 15 44 44 H 1.09002 * 109.47153 * 60.00231 * 25 19 18 45 45 H 1.09001 * 109.47289 * 180.02562 * 25 19 18 46 46 H 1.09000 * 109.47486 * 59.99569 * 26 15 14 47 47 H 1.09002 * 109.46716 * 299.99651 * 26 15 14 48 48 H 1.07999 * 119.99538 * 179.70764 * 27 9 5 49 49 H 1.08000 * 120.00047 * 180.27742 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2842 0.0005 5 6 4.0584 2.5152 0.0000 6 6 5.5633 2.5941 0.0012 7 8 6.0218 2.9666 -1.3000 8 14 6.2719 0.9325 0.4571 9 6 3.3031 3.6782 -0.0016 10 8 3.9204 4.8898 -0.0027 11 6 3.0805 6.0459 -0.0037 12 6 3.9346 7.2874 -0.0054 13 8 5.1437 7.1917 -0.0052 14 7 3.3550 8.5042 -0.0061 15 6 4.1853 9.7111 -0.0084 16 1 5.0842 9.5327 -0.5985 17 6 3.3968 10.8716 -0.6184 18 6 4.2643 12.1319 -0.6213 19 6 4.6589 12.4827 0.8147 20 1 3.7603 12.6614 1.4052 21 6 5.5259 13.7434 0.8120 22 9 4.8043 14.8043 0.2543 23 9 5.8872 14.0638 2.1250 24 9 6.6793 13.5144 0.0540 25 6 5.4475 11.3222 1.4248 26 6 4.5795 10.0616 1.4278 27 6 1.9178 3.6055 0.0031 28 6 1.2908 2.3750 -0.0020 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 4.0195 0.3785 0.0014 33 1 5.8876 3.3391 0.7277 34 1 5.6913 3.8234 -1.6030 35 1 7.7557 0.9886 0.4308 36 1 5.8026 0.5337 1.8083 37 1 2.4512 6.0386 0.8862 38 1 2.4513 6.0369 -0.8938 39 1 2.3880 8.5808 -0.0059 40 1 2.4979 11.0501 -0.0283 41 1 3.1160 10.6219 -1.6416 42 1 5.1628 11.9532 -1.2117 43 1 3.7022 12.9588 -1.0555 44 1 6.3461 11.1435 0.8344 45 1 5.7283 11.5719 2.4480 46 1 5.1414 9.2348 1.8625 47 1 3.6807 10.2400 2.0180 48 1 1.3296 4.5113 0.0066 49 1 0.2123 2.3185 -0.0029 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:21:22 Heat of formation + Delta-G solvation = -274.048661 kcal Electronic energy + Delta-G solvation = -36597.525854 eV Core-core repulsion = 31076.648233 eV Total energy + Delta-G solvation = -5520.877621 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.153 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -51.14877 -48.64079 -48.62678 -41.84558 -41.13607 -40.05213 -39.20875 -38.09318 -36.93351 -35.61164 -32.83295 -32.07958 -31.96423 -30.84680 -29.22595 -27.95394 -26.59841 -26.31930 -24.05551 -23.83423 -22.81755 -22.40750 -21.63772 -21.17131 -19.53998 -19.38304 -19.29171 -18.80584 -18.66797 -18.46919 -18.04315 -17.49530 -17.36536 -17.22081 -16.60814 -16.17822 -15.97777 -15.70978 -15.62710 -15.59554 -15.44769 -15.34367 -15.13687 -14.99161 -14.97042 -14.79713 -14.79121 -14.56114 -14.47390 -14.17978 -14.09970 -13.74985 -13.58152 -13.53188 -13.42396 -13.30853 -13.03357 -12.55898 -12.47655 -12.31102 -12.25258 -12.11023 -12.02970 -11.65715 -11.47594 -11.43866 -11.31040 -11.23113 -10.96129 -10.19133 -10.09584 -8.81933 -4.94295 0.06646 0.33582 1.32841 1.43204 1.44571 1.57288 1.76010 1.90767 2.35288 2.53962 2.56311 2.79887 2.92852 3.01019 3.47063 3.53774 3.58337 3.62729 3.74276 3.85294 3.87105 3.94732 4.03808 4.06303 4.09425 4.10721 4.13744 4.19975 4.21016 4.24577 4.27963 4.35945 4.45393 4.45979 4.54833 4.68992 4.70776 4.80266 4.84923 4.94497 4.97378 5.02224 5.03432 5.12461 5.16847 5.20481 5.21062 5.39806 5.43305 6.13579 6.42054 6.47626 6.51394 7.13258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.090 3.910 4 C -0.119 4.119 5 C -0.119 4.119 6 C -0.081 4.081 7 O -0.545 6.545 8 Si 0.810 3.190 9 C 0.090 3.910 10 O -0.317 6.317 11 C 0.037 3.963 12 C 0.513 3.487 13 O -0.570 6.570 14 N -0.704 5.704 15 C 0.143 3.857 16 H 0.065 0.935 17 C -0.110 4.110 18 C -0.117 4.117 19 C -0.123 4.123 20 H 0.140 0.860 21 C 0.447 3.553 22 F -0.188 7.188 23 F -0.193 7.193 24 F -0.193 7.193 25 C -0.116 4.116 26 C -0.119 4.119 27 C -0.159 4.159 28 C -0.161 4.161 29 H 0.068 0.932 30 H 0.114 0.886 31 H 0.066 0.934 32 H 0.151 0.849 33 H 0.061 0.939 34 H 0.372 0.628 35 H -0.295 1.295 36 H -0.264 1.264 37 H 0.123 0.877 38 H 0.127 0.873 39 H 0.422 0.578 40 H 0.101 0.899 41 H 0.090 0.910 42 H 0.069 0.931 43 H 0.094 0.906 44 H 0.065 0.935 45 H 0.080 0.920 46 H 0.052 0.948 47 H 0.092 0.908 48 H 0.169 0.831 49 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.086 0.329 -0.591 13.103 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.045 3.955 4 C -0.137 4.137 5 C -0.120 4.120 6 C -0.188 4.188 7 O -0.351 6.351 8 Si 0.711 3.289 9 C 0.045 3.955 10 O -0.231 6.231 11 C -0.041 4.041 12 C 0.299 3.701 13 O -0.448 6.448 14 N -0.358 5.358 15 C 0.038 3.962 16 H 0.083 0.917 17 C -0.148 4.148 18 C -0.155 4.155 19 C -0.143 4.143 20 H 0.158 0.842 21 C 0.393 3.607 22 F -0.170 7.170 23 F -0.174 7.174 24 F -0.175 7.175 25 C -0.154 4.154 26 C -0.157 4.157 27 C -0.177 4.177 28 C -0.180 4.180 29 H 0.086 0.914 30 H 0.132 0.868 31 H 0.085 0.915 32 H 0.169 0.831 33 H 0.079 0.921 34 H 0.220 0.780 35 H -0.223 1.223 36 H -0.190 1.190 37 H 0.140 0.860 38 H 0.144 0.856 39 H 0.261 0.739 40 H 0.119 0.881 41 H 0.108 0.892 42 H 0.088 0.912 43 H 0.113 0.887 44 H 0.083 0.917 45 H 0.099 0.901 46 H 0.071 0.929 47 H 0.110 0.890 48 H 0.186 0.814 49 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -11.147 -0.856 -0.002 11.180 hybrid contribution -0.289 2.325 0.460 2.387 sum -11.436 1.468 0.458 11.539 Atomic orbital electron populations 1.23356 0.76370 1.05613 1.02375 1.86088 1.23405 1.26343 1.88934 1.18982 0.91923 0.85384 0.99204 1.20180 0.92459 0.96778 1.04295 1.19444 0.95960 0.91052 1.05568 1.25494 0.92900 1.12414 0.87997 1.86664 1.74188 1.42253 1.32020 0.92228 0.76226 0.79114 0.81313 1.18792 0.91737 0.84237 1.00733 1.86086 1.35600 1.11954 1.89437 1.22736 0.92658 0.81880 1.06824 1.20531 0.88324 0.85547 0.75709 1.90784 1.16734 1.87357 1.49908 1.45693 1.11488 1.03880 1.74770 1.21033 0.94565 0.84099 0.96473 0.91675 1.21694 0.98648 0.91348 1.03118 1.21593 1.01513 0.99535 0.92848 1.22596 0.99495 0.89783 1.02383 0.84201 1.21068 0.79713 0.87089 0.72857 1.93176 1.77577 1.60680 1.85550 1.93173 1.92662 1.94068 1.37502 1.93166 1.53055 1.94608 1.76638 1.21546 0.98494 0.93347 1.02025 1.21811 1.00650 0.96261 0.97022 1.21375 0.92011 1.00034 1.04291 1.21425 1.01605 0.90923 1.04023 0.91384 0.86773 0.91527 0.83146 0.92091 0.77993 1.22252 1.18970 0.85968 0.85590 0.73943 0.88059 0.89177 0.91248 0.88744 0.91668 0.90128 0.92943 0.88950 0.81411 0.82088 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.56 10.50 -93.34 -0.98 -1.54 16 3 C 0.09 0.19 6.69 22.49 0.15 0.34 16 4 C -0.12 -0.48 8.59 22.35 0.19 -0.29 16 5 C -0.12 -0.66 5.28 -19.78 -0.10 -0.77 16 6 C -0.08 -0.64 2.33 71.23 0.17 -0.47 16 7 O -0.55 -5.30 12.65 -148.98 -1.89 -7.19 16 8 Si 0.81 4.30 30.17 68.60 2.07 6.37 16 9 C 0.09 0.23 6.62 22.49 0.15 0.38 16 10 O -0.32 -1.10 8.56 -74.36 -0.64 -1.74 16 11 C 0.04 -0.22 5.22 71.23 0.37 0.16 16 12 C 0.51 -0.18 7.87 87.66 0.69 0.51 16 13 O -0.57 -6.63 16.16 15.98 0.26 -6.37 16 14 N -0.70 5.63 5.08 -442.53 -2.25 3.38 16 15 C 0.14 -0.78 2.45 44.99 0.11 -0.67 16 16 H 0.06 0.07 7.58 -2.39 -0.02 0.06 16 17 C -0.11 1.21 5.39 30.59 0.16 1.38 16 18 C -0.12 0.88 4.96 30.60 0.15 1.03 16 19 C -0.12 0.70 2.16 -10.79 -0.02 0.68 16 20 H 0.14 -1.42 8.14 -2.39 -0.02 -1.44 16 21 C 0.45 0.26 2.69 71.98 0.19 0.45 16 22 F -0.19 -0.38 16.80 44.97 0.76 0.38 16 23 F -0.19 -0.66 16.80 44.97 0.76 0.10 16 24 F -0.19 -0.80 16.28 44.97 0.73 -0.07 16 25 C -0.12 0.40 4.96 30.61 0.15 0.55 16 26 C -0.12 0.54 5.50 30.61 0.17 0.71 16 27 C -0.16 0.54 9.03 22.35 0.20 0.74 16 28 C -0.16 0.43 9.03 22.35 0.20 0.63 16 29 H 0.07 -0.59 7.66 -2.39 -0.02 -0.61 16 30 H 0.11 -1.01 8.14 -2.39 -0.02 -1.03 16 31 H 0.07 -0.57 7.66 -2.39 -0.02 -0.59 16 32 H 0.15 0.21 5.13 -2.91 -0.01 0.20 16 33 H 0.06 0.64 7.82 -2.39 -0.02 0.62 16 34 H 0.37 2.66 8.59 -74.05 -0.64 2.02 16 35 H -0.29 -3.46 7.11 99.48 0.71 -2.76 16 36 H -0.26 -1.90 7.11 99.48 0.71 -1.19 16 37 H 0.12 -1.45 7.65 -2.39 -0.02 -1.47 16 38 H 0.13 -1.56 7.67 -2.38 -0.02 -1.58 16 39 H 0.42 -6.79 8.60 -92.71 -0.80 -7.59 16 40 H 0.10 -1.55 8.14 -2.39 -0.02 -1.57 16 41 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 42 H 0.07 -0.32 7.80 -2.39 -0.02 -0.33 16 43 H 0.09 -0.83 7.80 -2.39 -0.02 -0.84 16 44 H 0.06 -0.01 7.80 -2.39 -0.02 -0.02 16 45 H 0.08 -0.24 7.80 -2.39 -0.02 -0.26 16 46 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 47 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 48 H 0.17 -1.90 6.29 -2.91 -0.02 -1.92 16 49 H 0.16 -1.37 6.29 -2.91 -0.02 -1.39 16 Total: 0.00 -26.39 406.80 2.50 -23.89 By element: Atomic # 1 Polarization: -23.20 SS G_CDS: -0.37 Total: -23.57 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: 4.05 Total: 6.37 kcal Atomic # 7 Polarization: 5.63 SS G_CDS: -2.25 Total: 3.38 kcal Atomic # 8 Polarization: -13.60 SS G_CDS: -3.24 Total: -16.84 kcal Atomic # 9 Polarization: -1.84 SS G_CDS: 2.24 Total: 0.41 kcal Atomic # 14 Polarization: 4.30 SS G_CDS: 2.07 Total: 6.37 kcal Total: -26.39 2.50 -23.89 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -250.154 kcal (2) G-P(sol) polarization free energy of solvation -26.393 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -276.547 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.498 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.895 kcal (6) G-S(sol) free energy of system = (1) + (5) -274.049 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds