Wall clock time and date at job start Sat Mar 6 2021 20:21:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35898 * 116.99463 * 2 1 4 4 C 1.38612 * 120.02450 * 180.02562 * 3 2 1 5 5 C 1.38655 * 119.89107 * 179.97438 * 4 3 2 6 6 O 1.35899 * 120.02714 * 180.31573 * 5 4 3 7 7 C 1.42902 * 117.00044 * 359.73094 * 6 5 4 8 8 C 1.50699 * 109.46812 * 179.97438 * 7 6 5 9 9 O 1.21283 * 120.00592 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99837 * 179.97438 * 8 7 6 11 11 C 1.46496 * 120.00467 * 180.02562 * 10 8 7 12 12 H 1.09003 * 109.46885 * 35.00082 * 11 10 8 13 13 C 1.52998 * 109.47537 * 154.99991 * 11 10 8 14 14 C 1.52996 * 109.47307 * 180.02562 * 13 11 10 15 15 C 1.53001 * 109.47373 * 300.00466 * 14 13 11 16 16 H 1.09003 * 109.46775 * 299.99832 * 15 14 13 17 17 C 1.52996 * 109.47373 * 179.97438 * 15 14 13 18 18 F 1.39905 * 109.47281 * 59.99464 * 17 15 14 19 19 F 1.39899 * 109.47364 * 179.97438 * 17 15 14 20 20 F 1.39899 * 109.47187 * 299.99998 * 17 15 14 21 21 C 1.52998 * 109.47284 * 59.99519 * 15 14 13 22 22 C 1.52996 * 109.47307 * 300.00521 * 21 15 14 23 23 C 1.38755 * 119.94565 * 0.04875 * 5 4 3 24 24 C 1.50699 * 119.97041 * 179.97438 * 23 5 4 25 25 O 1.42907 * 109.47038 * 284.99535 * 24 23 5 26 26 Si 1.86299 * 109.46957 * 164.99888 * 24 23 5 27 27 C 1.38195 * 120.05111 * 359.97438 * 23 5 4 28 28 C 1.38152 * 120.11104 * 359.97436 * 27 23 5 29 29 H 1.08996 * 109.47230 * 59.99875 * 1 2 3 30 30 H 1.09001 * 109.46437 * 180.02562 * 1 2 3 31 31 H 1.09005 * 109.46690 * 299.99584 * 1 2 3 32 32 H 1.07999 * 120.05518 * 0.02562 * 4 3 2 33 33 H 1.08996 * 109.46914 * 299.99692 * 7 6 5 34 34 H 1.08996 * 109.47014 * 60.00044 * 7 6 5 35 35 H 0.97010 * 120.00048 * 0.02562 * 10 8 7 36 36 H 1.09000 * 109.47241 * 300.00054 * 13 11 10 37 37 H 1.09003 * 109.46959 * 60.00136 * 13 11 10 38 38 H 1.09003 * 109.47032 * 60.00141 * 14 13 11 39 39 H 1.08997 * 109.47255 * 179.97438 * 14 13 11 40 40 H 1.09003 * 109.46959 * 60.00425 * 21 15 14 41 41 H 1.09000 * 109.47241 * 180.02562 * 21 15 14 42 42 H 1.09003 * 109.47032 * 299.99859 * 22 21 15 43 43 H 1.08997 * 109.47255 * 180.02562 * 22 21 15 44 44 H 1.08993 * 109.47936 * 44.99788 * 24 23 5 45 45 H 0.96697 * 113.99918 * 300.00196 * 25 24 23 46 46 H 1.48505 * 109.99943 * 58.67597 * 26 24 23 47 47 H 1.48497 * 110.00326 * 179.97438 * 26 24 23 48 48 H 1.07999 * 119.93794 * 180.02562 * 27 23 5 49 49 H 1.07999 * 119.96849 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0005 5 6 4.0566 2.5211 -0.0011 6 8 5.4135 2.5962 -0.0081 7 6 6.1316 1.3607 -0.0087 8 6 7.6124 1.6405 -0.0174 9 8 8.0133 2.7851 -0.0222 10 7 8.4912 0.6186 -0.0190 11 6 9.9307 0.8904 -0.0269 12 1 10.1344 1.7867 0.5590 13 6 10.6775 -0.2978 0.5823 14 6 12.1808 -0.0136 0.5746 15 6 12.6519 0.2010 -0.8652 16 1 12.4486 -0.6952 -1.4514 17 6 14.1551 0.4858 -0.8729 18 9 14.8385 -0.6003 -0.3156 19 9 14.5860 0.6815 -2.1894 20 9 14.4157 1.6362 -0.1206 21 6 11.9051 1.3893 -1.4744 22 6 10.4018 1.1051 -1.4667 23 6 3.2969 3.6823 0.0000 24 6 3.9773 5.0270 0.0000 25 8 4.5044 5.2941 1.3011 26 14 2.7434 6.3471 -0.4532 27 6 1.9171 3.6065 0.0010 28 6 1.2905 2.3752 0.0004 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3632 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8901 32 1 4.0196 0.3793 -0.0014 33 1 5.8744 0.7906 0.8840 34 1 5.8655 0.7862 -0.8959 35 1 8.1705 -0.2969 -0.0148 36 1 10.3423 -0.4504 1.6082 37 1 10.4738 -1.1941 -0.0036 38 1 12.3842 0.8826 1.1608 39 1 12.7129 -0.8599 1.0090 40 1 12.1085 2.2854 -0.8882 41 1 12.2404 1.5419 -2.5003 42 1 10.1984 0.2089 -2.0529 43 1 9.8698 1.9514 -1.9011 44 1 4.7891 5.0235 -0.7272 45 1 3.8363 5.3123 2.0000 46 1 1.6153 6.3410 0.5125 47 1 3.4017 7.6782 -0.4562 48 1 1.3276 4.5115 0.0013 49 1 0.2120 2.3187 0.0008 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:21:26 Heat of formation + Delta-G solvation = -270.175777 kcal Electronic energy + Delta-G solvation = -36659.988850 eV Core-core repulsion = 31139.279169 eV Total energy + Delta-G solvation = -5520.709680 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.153 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -51.13782 -48.62729 -48.61675 -41.85298 -41.13465 -40.04882 -39.23199 -38.31555 -37.00850 -35.60760 -32.36064 -32.09381 -31.95899 -31.19051 -29.24111 -28.34462 -26.32342 -26.13138 -24.04234 -23.81326 -22.80569 -22.48828 -21.63622 -21.16561 -19.96300 -19.37634 -19.27964 -18.68648 -18.55993 -18.12747 -17.85362 -17.52012 -17.33640 -16.94834 -16.66837 -16.49702 -16.09501 -15.98695 -15.69097 -15.59649 -15.48975 -15.18295 -15.11981 -15.04797 -14.96195 -14.78561 -14.78056 -14.73179 -14.50944 -14.48665 -13.77635 -13.75345 -13.57562 -13.45473 -13.33360 -13.29966 -13.13197 -12.54040 -12.45268 -12.30483 -12.24059 -12.11265 -12.01472 -11.65963 -11.64830 -11.62831 -11.46060 -10.98328 -10.51676 -10.18880 -9.69992 -9.10332 -4.93157 0.20157 0.30916 1.31672 1.43146 1.43527 1.55510 1.76918 1.96321 2.25086 2.55265 2.57464 2.80722 2.93887 3.02287 3.49328 3.50940 3.59354 3.63783 3.72508 3.80439 3.87851 3.95086 4.02800 4.06382 4.06882 4.10079 4.17374 4.20856 4.25417 4.34962 4.37162 4.40781 4.42910 4.46841 4.55711 4.66212 4.69938 4.79536 4.85683 4.95498 5.02303 5.03342 5.04162 5.17798 5.20998 5.23689 5.28027 5.41128 5.47778 6.13716 6.36200 6.45968 6.57064 7.13046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.329 6.329 3 C 0.165 3.835 4 C -0.251 4.251 5 C 0.177 3.823 6 O -0.304 6.304 7 C 0.034 3.966 8 C 0.514 3.486 9 O -0.567 6.567 10 N -0.705 5.705 11 C 0.142 3.858 12 H 0.063 0.937 13 C -0.111 4.111 14 C -0.116 4.116 15 C -0.124 4.124 16 H 0.141 0.859 17 C 0.447 3.553 18 F -0.189 7.189 19 F -0.192 7.192 20 F -0.193 7.193 21 C -0.116 4.116 22 C -0.119 4.119 23 C -0.196 4.196 24 C -0.077 4.077 25 O -0.550 6.550 26 Si 0.780 3.220 27 C -0.041 4.041 28 C -0.238 4.238 29 H 0.070 0.930 30 H 0.116 0.884 31 H 0.066 0.934 32 H 0.155 0.845 33 H 0.119 0.881 34 H 0.125 0.875 35 H 0.422 0.578 36 H 0.088 0.912 37 H 0.102 0.898 38 H 0.068 0.932 39 H 0.094 0.906 40 H 0.064 0.936 41 H 0.082 0.918 42 H 0.093 0.907 43 H 0.053 0.947 44 H 0.097 0.903 45 H 0.381 0.619 46 H -0.262 1.262 47 H -0.309 1.309 48 H 0.155 0.845 49 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.912 -8.618 -1.670 11.817 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.270 4.270 5 C 0.131 3.869 6 O -0.216 6.216 7 C -0.044 4.044 8 C 0.300 3.700 9 O -0.445 6.445 10 N -0.359 5.359 11 C 0.038 3.962 12 H 0.082 0.918 13 C -0.149 4.149 14 C -0.155 4.155 15 C -0.143 4.143 16 H 0.159 0.841 17 C 0.393 3.607 18 F -0.170 7.170 19 F -0.173 7.173 20 F -0.175 7.175 21 C -0.154 4.154 22 C -0.157 4.157 23 C -0.197 4.197 24 C -0.185 4.185 25 O -0.357 6.357 26 Si 0.684 3.316 27 C -0.059 4.059 28 C -0.257 4.257 29 H 0.089 0.911 30 H 0.135 0.865 31 H 0.085 0.915 32 H 0.172 0.828 33 H 0.137 0.863 34 H 0.143 0.857 35 H 0.260 0.740 36 H 0.106 0.894 37 H 0.120 0.880 38 H 0.087 0.913 39 H 0.113 0.887 40 H 0.083 0.917 41 H 0.101 0.899 42 H 0.111 0.889 43 H 0.072 0.928 44 H 0.115 0.885 45 H 0.230 0.770 46 H -0.188 1.188 47 H -0.237 1.237 48 H 0.172 0.828 49 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -7.233 -7.107 -1.747 10.290 hybrid contribution 0.579 -0.263 1.218 1.374 sum -6.654 -7.370 -0.529 9.943 Atomic orbital electron populations 1.23403 0.76022 1.05705 1.02668 1.86056 1.23730 1.26553 1.87924 1.18871 0.91682 0.84953 0.92662 1.20556 0.93377 0.97427 1.15680 1.18578 0.81742 0.93146 0.93431 1.86224 1.15494 1.31759 1.88098 1.22757 0.88538 0.86451 1.06640 1.20464 0.88503 0.85276 0.75792 1.90788 1.80690 1.23288 1.49739 1.45697 1.05731 1.09600 1.74837 1.21049 0.78941 0.99573 0.96660 0.91829 1.21696 0.92702 0.97429 1.03027 1.21585 0.96962 1.03989 0.92916 1.22596 0.85712 1.03706 1.02256 0.84115 1.21049 0.93065 0.73680 0.72876 1.93177 1.82984 1.55271 1.85568 1.93173 1.91960 1.95046 1.37152 1.93164 1.95533 1.51855 1.76918 1.21537 0.95270 0.96446 1.02116 1.21799 0.94081 1.03058 0.96784 1.19599 0.93506 0.93958 1.12633 1.25145 1.06237 0.99771 0.87324 1.86652 1.38558 1.93082 1.17442 0.94125 0.75477 0.73376 0.88590 1.20941 0.92029 0.98808 0.94125 1.21393 1.01604 0.91259 1.11401 0.91115 0.86536 0.91524 0.82793 0.86311 0.85744 0.73999 0.89376 0.87989 0.91310 0.88712 0.91706 0.89926 0.88863 0.92807 0.88465 0.77027 1.18840 1.23746 0.82770 0.82569 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 0.00 10.50 -92.40 -0.97 -0.96 16 3 C 0.16 0.16 6.68 22.49 0.15 0.31 16 4 C -0.25 -0.34 8.97 22.46 0.20 -0.13 16 5 C 0.18 0.87 6.66 22.49 0.15 1.02 16 6 O -0.30 -2.33 8.99 -73.38 -0.66 -2.99 16 7 C 0.03 -0.05 5.22 71.24 0.37 0.32 16 8 C 0.51 1.66 7.87 87.66 0.69 2.35 16 9 O -0.57 -8.67 16.16 16.00 0.26 -8.41 16 10 N -0.70 3.60 5.08 -442.54 -2.25 1.35 16 11 C 0.14 -0.48 2.45 44.99 0.11 -0.37 16 12 H 0.06 0.22 7.58 -2.39 -0.02 0.20 16 13 C -0.11 1.01 5.39 30.59 0.16 1.18 16 14 C -0.12 0.72 4.96 30.59 0.15 0.87 16 15 C -0.12 0.58 2.17 -10.80 -0.02 0.56 16 16 H 0.14 -1.30 8.14 -2.39 -0.02 -1.32 16 17 C 0.45 0.58 2.69 71.98 0.19 0.78 16 18 F -0.19 -0.51 16.80 44.97 0.76 0.25 16 19 F -0.19 -0.75 16.80 44.97 0.76 0.00 16 20 F -0.19 -0.95 16.28 44.97 0.73 -0.22 16 21 C -0.12 0.28 4.96 30.59 0.15 0.44 16 22 C -0.12 0.37 5.50 30.59 0.17 0.54 16 23 C -0.20 -0.78 5.27 -19.75 -0.10 -0.88 16 24 C -0.08 -0.46 2.38 71.24 0.17 -0.29 16 25 O -0.55 -5.45 12.88 -148.98 -1.92 -7.37 16 26 Si 0.78 0.50 30.24 68.60 2.07 2.58 16 27 C -0.04 0.02 8.65 22.24 0.19 0.21 16 28 C -0.24 0.34 9.03 22.38 0.20 0.55 16 29 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 30 H 0.12 -1.16 8.14 -2.39 -0.02 -1.18 16 31 H 0.07 -0.57 7.66 -2.38 -0.02 -0.59 16 32 H 0.15 -0.51 6.30 -2.91 -0.02 -0.53 16 33 H 0.12 -0.80 7.67 -2.39 -0.02 -0.82 16 34 H 0.12 -0.97 7.65 -2.39 -0.02 -0.98 16 35 H 0.42 -5.52 8.60 -92.70 -0.80 -6.31 16 36 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 37 H 0.10 -1.39 8.14 -2.39 -0.02 -1.41 16 38 H 0.07 -0.22 7.80 -2.39 -0.02 -0.24 16 39 H 0.09 -0.72 7.80 -2.39 -0.02 -0.73 16 40 H 0.06 0.06 7.80 -2.39 -0.02 0.04 16 41 H 0.08 -0.20 7.80 -2.39 -0.02 -0.22 16 42 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 43 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 44 H 0.10 0.88 7.82 -2.39 -0.02 0.86 16 45 H 0.38 0.92 8.70 -74.06 -0.64 0.27 16 46 H -0.26 -0.23 6.68 99.48 0.66 0.44 16 47 H -0.31 -2.84 7.11 99.48 0.71 -2.14 16 48 H 0.16 -0.70 4.85 -2.91 -0.01 -0.72 16 49 H 0.16 -1.02 6.29 -2.91 -0.02 -1.04 16 Total: 0.00 -28.27 407.02 2.41 -25.85 By element: Atomic # 1 Polarization: -18.11 SS G_CDS: -0.42 Total: -18.54 kcal Atomic # 6 Polarization: 4.40 SS G_CDS: 4.05 Total: 8.46 kcal Atomic # 7 Polarization: 3.60 SS G_CDS: -2.25 Total: 1.35 kcal Atomic # 8 Polarization: -16.44 SS G_CDS: -3.29 Total: -19.73 kcal Atomic # 9 Polarization: -2.21 SS G_CDS: 2.24 Total: 0.03 kcal Atomic # 14 Polarization: 0.50 SS G_CDS: 2.07 Total: 2.58 kcal Total: -28.27 2.41 -25.85 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -244.321 kcal (2) G-P(sol) polarization free energy of solvation -28.265 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -272.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.411 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -270.176 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds