Wall clock time and date at job start Sat Mar 6 2021 20:22:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86303 * 109.46993 * 2 1 4 4 C 1.50706 * 109.47307 * 119.99921 * 2 1 3 5 5 C 1.34232 * 126.49687 * 255.02829 * 4 2 1 6 6 N 1.36839 * 109.93459 * 179.97438 * 5 4 2 7 7 C 1.46502 * 125.05913 * 180.02562 * 6 5 4 8 8 C 1.50692 * 109.47347 * 264.97268 * 7 6 5 9 9 O 1.21283 * 120.00045 * 0.02562 * 8 7 6 10 10 N 1.34771 * 120.00256 * 179.97438 * 8 7 6 11 11 C 1.46499 * 120.00201 * 180.02562 * 10 8 7 12 12 H 1.09001 * 109.47557 * 325.00401 * 11 10 8 13 13 C 1.53002 * 109.46996 * 85.00537 * 11 10 8 14 14 C 1.53005 * 109.46998 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.47039 * 299.99926 * 14 13 11 16 16 H 1.09004 * 109.46758 * 299.99593 * 15 14 13 17 17 C 1.53005 * 109.46998 * 180.02562 * 15 14 13 18 18 F 1.39899 * 109.46735 * 299.99824 * 17 15 14 19 19 F 1.39898 * 109.47090 * 59.99493 * 17 15 14 20 20 F 1.39895 * 109.46870 * 179.97438 * 17 15 14 21 21 C 1.52993 * 109.47241 * 59.99997 * 15 14 13 22 22 C 1.52996 * 109.47402 * 300.00250 * 21 15 14 23 23 C 1.37685 * 109.87604 * 359.76444 * 6 5 4 24 24 C 1.39083 * 133.51416 * 179.56457 * 23 6 5 25 25 C 1.37787 * 119.77868 * 180.38979 * 24 23 6 26 26 C 1.38793 * 120.66946 * 0.25323 * 25 24 23 27 27 C 1.36663 * 120.52656 * 0.02562 * 26 25 24 28 28 C 1.39595 * 119.75974 * 359.97438 * 27 26 25 29 29 H 0.96695 * 114.00578 * 300.00164 * 1 2 3 30 30 H 1.09002 * 109.47450 * 240.00008 * 2 1 3 31 31 H 1.48500 * 109.99950 * 178.68130 * 3 2 1 32 32 H 1.48505 * 109.99825 * 299.99532 * 3 2 1 33 33 H 1.08001 * 125.03580 * 359.93736 * 5 4 2 34 34 H 1.08998 * 109.47276 * 24.98060 * 7 6 5 35 35 H 1.09003 * 109.46694 * 144.97715 * 7 6 5 36 36 H 0.96998 * 120.00054 * 0.02562 * 10 8 7 37 37 H 1.08994 * 109.47282 * 299.99649 * 13 11 10 38 38 H 1.09000 * 109.47204 * 60.00346 * 13 11 10 39 39 H 1.08998 * 109.46801 * 179.97438 * 14 13 11 40 40 H 1.09000 * 109.46894 * 60.00115 * 14 13 11 41 41 H 1.09004 * 109.47071 * 179.97438 * 21 15 14 42 42 H 1.09001 * 109.46893 * 60.00384 * 21 15 14 43 43 H 1.09013 * 109.46788 * 299.99850 * 22 21 15 44 44 H 1.09002 * 109.47539 * 180.02562 * 22 21 15 45 45 H 1.08002 * 120.11260 * 0.67091 * 24 23 6 46 46 H 1.08001 * 119.67092 * 180.23237 * 25 24 23 47 47 H 1.08001 * 119.73600 * 179.97438 * 26 25 24 48 48 H 1.07992 * 120.12221 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4603 -0.1375 2.3231 6 7 2.8020 -1.0989 3.2350 7 6 3.4058 -0.8401 4.5445 8 6 4.9041 -0.9625 4.4399 9 8 5.4172 -1.2383 3.3761 10 7 5.6740 -0.7645 5.5282 11 6 7.1306 -0.8830 5.4264 12 1 7.3824 -1.6679 4.7132 13 6 7.7184 0.4468 4.9497 14 6 9.2396 0.3229 4.8428 15 6 9.8202 -0.0291 6.2139 16 1 9.5689 0.7558 6.9272 17 6 11.3416 -0.1524 6.1071 18 9 11.6646 -1.1595 5.1913 19 9 11.8785 1.0637 5.6714 20 9 11.8725 -0.4737 7.3608 21 6 9.2325 -1.3588 6.6905 22 6 7.7113 -1.2350 6.7974 23 6 2.4885 -2.3452 2.7409 24 6 2.6283 -3.6360 3.2396 25 6 2.2149 -4.7106 2.4827 26 6 1.6641 -4.5193 1.2232 27 6 1.5227 -3.2600 0.7113 28 6 1.9349 -2.1570 1.4611 29 1 -0.3934 0.4417 0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 3.5345 1.7703 0.0321 32 1 1.5614 2.4679 -1.2086 33 1 2.5966 0.9249 2.4618 34 1 3.1454 0.1663 4.8721 35 1 3.0315 -1.5656 5.2668 36 1 5.2637 -0.5436 6.3789 37 1 7.3051 0.6974 3.9728 38 1 7.4667 1.2317 5.6629 39 1 9.6582 1.2701 4.5028 40 1 9.4909 -0.4619 4.1294 41 1 9.6466 -1.6098 7.6671 42 1 9.4840 -2.1437 5.9771 43 1 7.4599 -0.4501 7.5109 44 1 7.2926 -2.1822 7.1374 45 1 3.0553 -3.7953 4.2188 46 1 2.3208 -5.7119 2.8732 47 1 1.3455 -5.3724 0.6426 48 1 1.0937 -3.1188 -0.2696 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:22:06 Heat of formation + Delta-G solvation = -162.331268 kcal Electronic energy + Delta-G solvation = -35649.706341 eV Core-core repulsion = 30449.159341 eV Total energy + Delta-G solvation = -5200.546999 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.150 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -51.11124 -48.59194 -48.57069 -42.51298 -41.16135 -39.45228 -38.00479 -37.53412 -35.70437 -34.09658 -32.21754 -32.07779 -31.11783 -30.13526 -28.91436 -26.61939 -25.55591 -24.24245 -23.72002 -23.16147 -22.45465 -21.75470 -21.37628 -20.58635 -19.38533 -19.26497 -18.77831 -18.58895 -18.46084 -17.79439 -17.41405 -16.97031 -16.46609 -16.34286 -16.06079 -15.86346 -15.73615 -15.44600 -15.36421 -15.26077 -15.16095 -14.97567 -14.77108 -14.76595 -14.73586 -14.64814 -14.60106 -14.40710 -14.04798 -13.91252 -13.72835 -13.64215 -13.54634 -13.32354 -12.73092 -12.60359 -12.52250 -12.47013 -12.23491 -12.12886 -12.02498 -11.88955 -11.69265 -11.67444 -11.12171 -10.43889 -10.32660 -10.23632 -9.04242 -8.54651 -5.04092 0.25955 0.77158 1.33621 1.35516 1.40684 1.64474 1.69485 1.76498 2.04784 2.05736 2.71668 2.83620 2.92147 3.09476 3.31760 3.41915 3.44090 3.49494 3.63162 3.68782 3.73287 3.78170 3.81083 3.84084 3.87292 3.96375 4.02617 4.05241 4.10280 4.29739 4.31303 4.35107 4.42349 4.56701 4.64673 4.66330 4.69757 4.75558 4.77861 4.80939 4.88480 4.92460 4.96917 4.99193 5.21114 5.23813 5.62797 5.78887 5.84340 5.88210 6.10326 6.28171 6.34461 6.74687 6.94760 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.068 3.932 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.491 3.509 9 O -0.511 6.511 10 N -0.726 5.726 11 C 0.142 3.858 12 H 0.093 0.907 13 C -0.124 4.124 14 C -0.117 4.117 15 C -0.133 4.133 16 H 0.117 0.883 17 C 0.453 3.547 18 F -0.181 7.181 19 F -0.183 7.183 20 F -0.183 7.183 21 C -0.116 4.116 22 C -0.121 4.121 23 C 0.109 3.891 24 C -0.128 4.128 25 C -0.097 4.097 26 C -0.145 4.145 27 C -0.066 4.066 28 C -0.087 4.087 29 H 0.376 0.624 30 H 0.111 0.889 31 H -0.256 1.256 32 H -0.255 1.255 33 H 0.171 0.829 34 H 0.124 0.876 35 H 0.118 0.882 36 H 0.402 0.598 37 H 0.077 0.923 38 H 0.071 0.929 39 H 0.082 0.918 40 H 0.080 0.920 41 H 0.085 0.915 42 H 0.081 0.919 43 H 0.075 0.925 44 H 0.080 0.920 45 H 0.114 0.886 46 H 0.125 0.875 47 H 0.123 0.877 48 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.935 2.725 8.024 8.968 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.583 3.417 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.150 5.150 7 C -0.035 4.035 8 C 0.275 3.725 9 O -0.385 6.385 10 N -0.379 5.379 11 C 0.038 3.962 12 H 0.111 0.889 13 C -0.163 4.163 14 C -0.156 4.156 15 C -0.153 4.153 16 H 0.135 0.865 17 C 0.399 3.601 18 F -0.163 7.163 19 F -0.164 7.164 20 F -0.165 7.165 21 C -0.154 4.154 22 C -0.159 4.159 23 C 0.004 3.996 24 C -0.148 4.148 25 C -0.116 4.116 26 C -0.165 4.165 27 C -0.084 4.084 28 C -0.091 4.091 29 H 0.223 0.777 30 H 0.128 0.872 31 H -0.181 1.181 32 H -0.179 1.179 33 H 0.188 0.812 34 H 0.142 0.858 35 H 0.136 0.864 36 H 0.237 0.763 37 H 0.096 0.904 38 H 0.089 0.911 39 H 0.101 0.899 40 H 0.099 0.901 41 H 0.104 0.896 42 H 0.100 0.900 43 H 0.094 0.906 44 H 0.099 0.901 45 H 0.132 0.868 46 H 0.143 0.857 47 H 0.141 0.859 48 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -1.815 2.889 6.530 7.367 hybrid contribution 0.451 -0.475 0.415 0.776 sum -1.363 2.414 6.945 7.478 Atomic orbital electron populations 1.86501 1.17506 1.81758 1.48910 1.24328 0.84631 1.08742 0.96306 0.95437 0.80960 0.77537 0.87721 1.20635 1.10041 0.92378 0.97415 1.21499 1.00971 0.93823 0.89313 1.43187 1.52552 1.04686 1.14533 1.21588 0.90684 1.05912 0.85270 1.21051 0.89563 0.77396 0.84505 1.90827 1.74566 1.45396 1.27691 1.46000 1.07069 1.72635 1.12153 1.21064 0.78662 0.98424 0.98050 0.88931 1.21864 0.94117 0.97415 1.02895 1.21582 0.95914 1.03767 0.94292 1.22561 0.87835 1.02595 1.02280 0.86503 1.20594 0.92221 0.73687 0.73614 1.93190 1.94267 1.61397 1.67412 1.93196 1.88448 1.45025 1.89746 1.93192 1.88683 1.92723 1.41856 1.21562 0.95388 0.95184 1.03316 1.21744 0.94732 1.03202 0.96246 1.18158 1.01235 0.85853 0.94336 1.19947 1.04996 0.89241 1.00649 1.20827 0.98333 0.97949 0.94487 1.20675 1.02432 0.96939 0.96408 1.20312 0.97964 0.90967 0.99194 1.18948 1.03445 0.92821 0.93862 0.77722 0.87185 1.18063 1.17910 0.81222 0.85830 0.86417 0.76337 0.90448 0.91062 0.89922 0.90095 0.89640 0.89994 0.90613 0.90106 0.86763 0.85730 0.85931 0.85978 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.76 12.88 -35.23 -0.45 -1.22 16 2 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.28 30.75 -169.99 -5.23 -5.50 16 4 C -0.20 -0.42 5.58 -102.71 -0.57 -0.99 16 5 C 0.07 0.01 9.89 -16.73 -0.17 -0.15 16 6 N -0.47 -0.26 2.27 -115.71 -0.26 -0.53 16 7 C 0.09 -0.31 6.48 -5.20 -0.03 -0.35 16 8 C 0.49 -0.50 7.86 -10.99 -0.09 -0.59 16 9 O -0.51 -2.23 16.09 5.56 0.09 -2.14 16 10 N -0.73 2.91 5.08 -53.81 -0.27 2.64 16 11 C 0.14 -0.41 2.45 -67.93 -0.17 -0.58 16 12 H 0.09 -0.02 7.58 -51.93 -0.39 -0.42 16 13 C -0.12 0.33 5.49 -26.73 -0.15 0.18 16 14 C -0.12 0.26 4.96 -26.73 -0.13 0.13 16 15 C -0.13 0.36 2.16 -90.62 -0.20 0.17 16 16 H 0.12 -0.49 8.14 -51.93 -0.42 -0.91 16 17 C 0.45 0.01 2.69 37.16 0.10 0.11 16 18 F -0.18 -0.25 16.28 2.25 0.04 -0.22 16 19 F -0.18 -0.24 16.80 2.25 0.04 -0.20 16 20 F -0.18 -0.18 16.80 2.25 0.04 -0.14 16 21 C -0.12 0.40 4.96 -26.74 -0.13 0.27 16 22 C -0.12 0.57 5.39 -26.73 -0.14 0.43 16 23 C 0.11 0.33 6.81 -83.99 -0.57 -0.24 16 24 C -0.13 -0.29 10.00 -39.43 -0.39 -0.68 16 25 C -0.10 -0.20 10.01 -39.54 -0.40 -0.60 16 26 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 27 C -0.07 -0.24 10.05 -39.64 -0.40 -0.64 16 28 C -0.09 -0.35 6.35 -105.14 -0.67 -1.02 16 29 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 30 H 0.11 0.26 7.96 -51.93 -0.41 -0.15 16 31 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 32 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 33 H 0.17 -0.58 6.35 -52.49 -0.33 -0.92 16 34 H 0.12 -0.86 8.12 -51.93 -0.42 -1.28 16 35 H 0.12 -0.64 8.14 -51.93 -0.42 -1.07 16 36 H 0.40 -2.91 8.60 -40.82 -0.35 -3.26 16 37 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 38 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.08 -0.17 7.80 -51.93 -0.41 -0.58 16 40 H 0.08 -0.09 7.80 -51.93 -0.41 -0.50 16 41 H 0.08 -0.31 7.80 -51.93 -0.41 -0.72 16 42 H 0.08 -0.21 7.80 -51.93 -0.41 -0.62 16 43 H 0.08 -0.45 8.14 -51.92 -0.42 -0.87 16 44 H 0.08 -0.39 8.14 -51.93 -0.42 -0.82 16 45 H 0.11 0.03 8.06 -52.49 -0.42 -0.40 16 46 H 0.12 -0.01 8.06 -52.49 -0.42 -0.44 16 47 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 48 H 0.12 0.35 8.06 -52.49 -0.42 -0.07 16 LS Contribution 404.93 15.07 6.10 6.10 Total: 0.00 -11.30 404.93 -10.87 -22.17 By element: Atomic # 1 Polarization: -9.15 SS G_CDS: -6.56 Total: -15.71 kcal Atomic # 6 Polarization: -0.86 SS G_CDS: -4.39 Total: -5.26 kcal Atomic # 7 Polarization: 2.65 SS G_CDS: -0.54 Total: 2.12 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.36 Total: -3.35 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.11 Total: -0.56 kcal Atomic # 14 Polarization: -0.28 SS G_CDS: -5.23 Total: -5.50 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -11.30 -10.87 -22.17 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.163 kcal (2) G-P(sol) polarization free energy of solvation -11.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.462 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.869 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.168 kcal (6) G-S(sol) free energy of system = (1) + (5) -162.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds