Wall clock time and date at job start Sat Mar 6 2021 20:22:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86303 * 109.46993 * 2 1 4 4 C 1.50706 * 109.47307 * 119.99921 * 2 1 3 5 5 C 1.34232 * 126.49687 * 255.02829 * 4 2 1 6 6 N 1.36839 * 109.93459 * 179.97438 * 5 4 2 7 7 C 1.46502 * 125.05913 * 180.02562 * 6 5 4 8 8 C 1.50692 * 109.47347 * 264.97268 * 7 6 5 9 9 O 1.21283 * 120.00045 * 0.02562 * 8 7 6 10 10 N 1.34771 * 120.00256 * 179.97438 * 8 7 6 11 11 C 1.46499 * 120.00201 * 180.02562 * 10 8 7 12 12 H 1.09001 * 109.47557 * 325.00401 * 11 10 8 13 13 C 1.53002 * 109.46996 * 85.00537 * 11 10 8 14 14 C 1.53005 * 109.46998 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.47039 * 299.99926 * 14 13 11 16 16 H 1.09004 * 109.46758 * 299.99593 * 15 14 13 17 17 C 1.53005 * 109.46998 * 180.02562 * 15 14 13 18 18 F 1.39899 * 109.46735 * 299.99824 * 17 15 14 19 19 F 1.39898 * 109.47090 * 59.99493 * 17 15 14 20 20 F 1.39895 * 109.46870 * 179.97438 * 17 15 14 21 21 C 1.52993 * 109.47241 * 59.99997 * 15 14 13 22 22 C 1.52996 * 109.47402 * 300.00250 * 21 15 14 23 23 C 1.37685 * 109.87604 * 359.76444 * 6 5 4 24 24 C 1.39083 * 133.51416 * 179.56457 * 23 6 5 25 25 C 1.37787 * 119.77868 * 180.38979 * 24 23 6 26 26 C 1.38793 * 120.66946 * 0.25323 * 25 24 23 27 27 C 1.36663 * 120.52656 * 0.02562 * 26 25 24 28 28 C 1.39595 * 119.75974 * 359.97438 * 27 26 25 29 29 H 0.96695 * 114.00578 * 300.00164 * 1 2 3 30 30 H 1.09002 * 109.47450 * 240.00008 * 2 1 3 31 31 H 1.48500 * 109.99950 * 178.68130 * 3 2 1 32 32 H 1.48505 * 109.99825 * 299.99532 * 3 2 1 33 33 H 1.08001 * 125.03580 * 359.93736 * 5 4 2 34 34 H 1.08998 * 109.47276 * 24.98060 * 7 6 5 35 35 H 1.09003 * 109.46694 * 144.97715 * 7 6 5 36 36 H 0.96998 * 120.00054 * 0.02562 * 10 8 7 37 37 H 1.08994 * 109.47282 * 299.99649 * 13 11 10 38 38 H 1.09000 * 109.47204 * 60.00346 * 13 11 10 39 39 H 1.08998 * 109.46801 * 179.97438 * 14 13 11 40 40 H 1.09000 * 109.46894 * 60.00115 * 14 13 11 41 41 H 1.09004 * 109.47071 * 179.97438 * 21 15 14 42 42 H 1.09001 * 109.46893 * 60.00384 * 21 15 14 43 43 H 1.09013 * 109.46788 * 299.99850 * 22 21 15 44 44 H 1.09002 * 109.47539 * 180.02562 * 22 21 15 45 45 H 1.08002 * 120.11260 * 0.67091 * 24 23 6 46 46 H 1.08001 * 119.67092 * 180.23237 * 25 24 23 47 47 H 1.08001 * 119.73600 * 179.97438 * 26 25 24 48 48 H 1.07992 * 120.12221 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4603 -0.1375 2.3231 6 7 2.8020 -1.0989 3.2350 7 6 3.4058 -0.8401 4.5445 8 6 4.9041 -0.9625 4.4399 9 8 5.4172 -1.2383 3.3761 10 7 5.6740 -0.7645 5.5282 11 6 7.1306 -0.8830 5.4264 12 1 7.3824 -1.6679 4.7132 13 6 7.7184 0.4468 4.9497 14 6 9.2396 0.3229 4.8428 15 6 9.8202 -0.0291 6.2139 16 1 9.5689 0.7558 6.9272 17 6 11.3416 -0.1524 6.1071 18 9 11.6646 -1.1595 5.1913 19 9 11.8785 1.0637 5.6714 20 9 11.8725 -0.4737 7.3608 21 6 9.2325 -1.3588 6.6905 22 6 7.7113 -1.2350 6.7974 23 6 2.4885 -2.3452 2.7409 24 6 2.6283 -3.6360 3.2396 25 6 2.2149 -4.7106 2.4827 26 6 1.6641 -4.5193 1.2232 27 6 1.5227 -3.2600 0.7113 28 6 1.9349 -2.1570 1.4611 29 1 -0.3934 0.4417 0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 3.5345 1.7703 0.0321 32 1 1.5614 2.4679 -1.2086 33 1 2.5966 0.9249 2.4618 34 1 3.1454 0.1663 4.8721 35 1 3.0315 -1.5656 5.2668 36 1 5.2637 -0.5436 6.3789 37 1 7.3051 0.6974 3.9728 38 1 7.4667 1.2317 5.6629 39 1 9.6582 1.2701 4.5028 40 1 9.4909 -0.4619 4.1294 41 1 9.6466 -1.6098 7.6671 42 1 9.4840 -2.1437 5.9771 43 1 7.4599 -0.4501 7.5109 44 1 7.2926 -2.1822 7.1374 45 1 3.0553 -3.7953 4.2188 46 1 2.3208 -5.7119 2.8732 47 1 1.3455 -5.3724 0.6426 48 1 1.0937 -3.1188 -0.2696 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:22:05 Heat of formation + Delta-G solvation = -161.622337 kcal Electronic energy + Delta-G solvation = -35649.675599 eV Core-core repulsion = 30449.159341 eV Total energy + Delta-G solvation = -5200.516258 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.150 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -51.15559 -48.64480 -48.63726 -42.52570 -41.03077 -39.31534 -38.09120 -37.58740 -35.57569 -34.07706 -32.00529 -31.95947 -31.11391 -30.22953 -28.85313 -26.56886 -25.55103 -24.01426 -23.78500 -23.10015 -22.47368 -21.60173 -21.21426 -20.62675 -19.39747 -19.29759 -18.69130 -18.57045 -18.33700 -17.78724 -17.35737 -16.90547 -16.43403 -16.36157 -16.03700 -15.86864 -15.68243 -15.45399 -15.38742 -15.17764 -15.08199 -14.99064 -14.85262 -14.80377 -14.79763 -14.69679 -14.55870 -14.39639 -14.07004 -13.80293 -13.62818 -13.55927 -13.33671 -13.11404 -12.71463 -12.58923 -12.50721 -12.26512 -12.24681 -12.13280 -12.09876 -11.82237 -11.64977 -11.46541 -11.08835 -10.54516 -10.30883 -10.14453 -9.15645 -8.62069 -5.05963 0.14123 0.62758 1.34195 1.43711 1.49575 1.64483 1.74077 1.76806 2.00053 2.21895 2.78318 2.92493 2.94328 3.00674 3.54979 3.60381 3.62037 3.67896 3.71215 3.76432 3.87883 3.88878 4.04110 4.06867 4.08950 4.19268 4.20234 4.22101 4.25111 4.30269 4.36361 4.48239 4.55796 4.56063 4.69764 4.71542 4.78605 4.85168 4.88413 4.94479 5.02847 5.03774 5.12986 5.17595 5.22566 5.44982 5.49932 5.65382 5.72909 5.75232 6.20563 6.24914 6.52325 6.89518 7.19271 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.042 4.042 3 Si 0.803 3.197 4 C -0.227 4.227 5 C 0.081 3.919 6 N -0.466 5.466 7 C 0.087 3.913 8 C 0.490 3.510 9 O -0.574 6.574 10 N -0.706 5.706 11 C 0.143 3.857 12 H 0.058 0.942 13 C -0.116 4.116 14 C -0.117 4.117 15 C -0.123 4.123 16 H 0.142 0.858 17 C 0.446 3.554 18 F -0.194 7.194 19 F -0.192 7.192 20 F -0.188 7.188 21 C -0.117 4.117 22 C -0.110 4.110 23 C 0.091 3.909 24 C -0.132 4.132 25 C -0.110 4.110 26 C -0.155 4.155 27 C -0.092 4.092 28 C -0.118 4.118 29 H 0.394 0.606 30 H 0.086 0.914 31 H -0.294 1.294 32 H -0.299 1.299 33 H 0.209 0.791 34 H 0.170 0.830 35 H 0.144 0.856 36 H 0.423 0.577 37 H 0.052 0.948 38 H 0.095 0.905 39 H 0.080 0.920 40 H 0.061 0.939 41 H 0.093 0.907 42 H 0.066 0.934 43 H 0.102 0.898 44 H 0.087 0.913 45 H 0.135 0.865 46 H 0.145 0.855 47 H 0.134 0.866 48 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.594 4.166 11.333 12.598 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.151 4.151 3 Si 0.709 3.291 4 C -0.234 4.234 5 C -0.044 4.044 6 N -0.148 5.148 7 C -0.037 4.037 8 C 0.276 3.724 9 O -0.453 6.453 10 N -0.359 5.359 11 C 0.038 3.962 12 H 0.077 0.923 13 C -0.155 4.155 14 C -0.155 4.155 15 C -0.142 4.142 16 H 0.160 0.840 17 C 0.392 3.608 18 F -0.176 7.176 19 F -0.174 7.174 20 F -0.170 7.170 21 C -0.155 4.155 22 C -0.148 4.148 23 C -0.014 4.014 24 C -0.152 4.152 25 C -0.129 4.129 26 C -0.173 4.173 27 C -0.111 4.111 28 C -0.123 4.123 29 H 0.243 0.757 30 H 0.104 0.896 31 H -0.222 1.222 32 H -0.227 1.227 33 H 0.225 0.775 34 H 0.187 0.813 35 H 0.162 0.838 36 H 0.261 0.739 37 H 0.071 0.929 38 H 0.113 0.887 39 H 0.099 0.901 40 H 0.079 0.921 41 H 0.112 0.888 42 H 0.084 0.916 43 H 0.121 0.879 44 H 0.106 0.894 45 H 0.153 0.847 46 H 0.163 0.837 47 H 0.152 0.848 48 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -2.502 4.315 9.931 11.113 hybrid contribution 0.731 -0.952 -0.636 1.358 sum -1.771 3.363 9.295 10.042 Atomic orbital electron populations 1.86450 1.17751 1.82393 1.50220 1.24581 0.84720 1.10433 0.95378 0.94155 0.76599 0.73429 0.84933 1.20781 1.12094 0.91865 0.98672 1.22068 0.98643 0.95365 0.88335 1.43447 1.51823 1.03725 1.15802 1.22033 0.88464 1.09384 0.83794 1.21512 0.90713 0.76210 0.84002 1.90820 1.75789 1.48508 1.30150 1.45820 1.06465 1.71146 1.12452 1.20964 0.79419 0.97282 0.98524 0.92338 1.21779 0.93316 0.98171 1.02216 1.21541 0.96547 1.02986 0.94401 1.22595 0.85421 1.03833 1.02319 0.84046 1.21095 0.93676 0.72985 0.73044 1.93163 1.94508 1.61971 1.67928 1.93172 1.88804 1.45536 1.89858 1.93176 1.88973 1.92743 1.42102 1.21586 0.96496 0.94255 1.03189 1.21690 0.93311 1.04519 0.95291 1.18378 1.01538 0.87150 0.94356 1.20253 1.04447 0.89066 1.01474 1.21127 0.98323 0.99100 0.94325 1.20907 1.02442 0.96945 0.97054 1.20441 0.99358 0.91900 0.99396 1.19380 1.04086 0.93932 0.94854 0.75674 0.89616 1.22206 1.22679 0.77454 0.81304 0.83809 0.73888 0.92904 0.88683 0.90108 0.92052 0.88843 0.91561 0.87927 0.89413 0.84740 0.83723 0.84775 0.86719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.28 12.88 -148.98 -1.92 -4.20 16 2 C -0.04 -0.17 3.06 71.24 0.22 0.04 16 3 Si 0.80 -0.56 30.75 68.60 2.11 1.55 16 4 C -0.23 -1.22 5.58 -18.63 -0.10 -1.32 16 5 C 0.08 -0.03 9.89 83.00 0.82 0.79 16 6 N -0.47 -0.08 2.27 -520.01 -1.18 -1.26 16 7 C 0.09 -0.84 6.48 85.63 0.55 -0.28 16 8 C 0.49 -1.57 7.86 87.66 0.69 -0.88 16 9 O -0.57 -5.55 16.09 -3.04 -0.05 -5.60 16 10 N -0.71 7.08 5.08 -442.55 -2.25 4.84 16 11 C 0.14 -0.93 2.45 44.99 0.11 -0.82 16 12 H 0.06 0.06 7.58 -2.39 -0.02 0.04 16 13 C -0.12 0.68 5.49 30.60 0.17 0.85 16 14 C -0.12 0.47 4.96 30.60 0.15 0.62 16 15 C -0.12 0.75 2.16 -10.79 -0.02 0.73 16 16 H 0.14 -1.53 8.14 -2.39 -0.02 -1.55 16 17 C 0.45 0.17 2.69 71.98 0.19 0.36 16 18 F -0.19 -0.82 16.28 44.97 0.73 -0.09 16 19 F -0.19 -0.59 16.80 44.97 0.76 0.16 16 20 F -0.19 -0.34 16.80 44.97 0.76 0.41 16 21 C -0.12 0.90 4.96 30.59 0.15 1.06 16 22 C -0.11 1.27 5.39 30.59 0.16 1.44 16 23 C 0.09 0.61 6.81 39.03 0.27 0.88 16 24 C -0.13 -0.64 10.00 22.37 0.22 -0.42 16 25 C -0.11 -0.56 10.01 22.30 0.22 -0.33 16 26 C -0.15 -1.13 9.97 22.03 0.22 -0.91 16 27 C -0.09 -0.96 10.05 22.23 0.22 -0.74 16 28 C -0.12 -1.19 6.35 -20.20 -0.13 -1.32 16 29 H 0.39 -2.08 8.70 -74.06 -0.64 -2.72 16 30 H 0.09 0.69 7.96 -2.39 -0.02 0.67 16 31 H -0.29 -1.68 7.11 99.48 0.71 -0.98 16 32 H -0.30 -1.96 7.11 99.48 0.71 -1.25 16 33 H 0.21 -1.97 6.35 -2.91 -0.02 -1.99 16 34 H 0.17 -3.15 8.12 -2.39 -0.02 -3.17 16 35 H 0.14 -2.08 8.14 -2.39 -0.02 -2.10 16 36 H 0.42 -7.67 8.60 -92.71 -0.80 -8.47 16 37 H 0.05 -0.01 8.14 -2.39 -0.02 -0.03 16 38 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 39 H 0.08 -0.29 7.80 -2.39 -0.02 -0.31 16 40 H 0.06 0.00 7.80 -2.39 -0.02 -0.02 16 41 H 0.09 -0.82 7.80 -2.38 -0.02 -0.84 16 42 H 0.07 -0.29 7.80 -2.39 -0.02 -0.30 16 43 H 0.10 -1.65 8.14 -2.38 -0.02 -1.67 16 44 H 0.09 -1.06 8.14 -2.39 -0.02 -1.08 16 45 H 0.13 -0.06 8.06 -2.91 -0.02 -0.08 16 46 H 0.15 -0.01 8.06 -2.91 -0.02 -0.04 16 47 H 0.13 0.45 8.06 -2.91 -0.02 0.43 16 48 H 0.11 1.13 8.06 -2.91 -0.02 1.11 16 Total: 0.00 -32.49 404.93 2.70 -29.79 By element: Atomic # 1 Polarization: -24.97 SS G_CDS: -0.39 Total: -25.35 kcal Atomic # 6 Polarization: -4.39 SS G_CDS: 4.12 Total: -0.27 kcal Atomic # 7 Polarization: 7.01 SS G_CDS: -3.43 Total: 3.58 kcal Atomic # 8 Polarization: -7.83 SS G_CDS: -1.97 Total: -9.80 kcal Atomic # 9 Polarization: -1.75 SS G_CDS: 2.24 Total: 0.49 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: 2.11 Total: 1.55 kcal Total: -32.49 2.70 -29.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.829 kcal (2) G-P(sol) polarization free energy of solvation -32.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.793 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.622 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds