Wall clock time and date at job start Sat Mar 6 2021 20:37:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.32691 * 124.68270 * 64.72493 * 4 2 1 6 6 C 1.44510 * 113.09402 * 179.87519 * 5 4 2 7 7 C 1.47051 * 123.48994 * 180.14853 * 6 5 4 8 8 O 1.21653 * 119.99722 * 180.25100 * 7 6 5 9 9 N 1.34771 * 119.99959 * 0.25757 * 7 6 5 10 10 C 1.46500 * 119.99818 * 180.02562 * 9 7 6 11 11 C 1.53001 * 109.47198 * 179.97438 * 10 9 7 12 12 H 1.08997 * 112.84792 * 43.79985 * 11 10 9 13 13 C 1.53779 * 113.61649 * 174.99867 * 11 10 9 14 14 C 1.53784 * 87.08189 * 139.97924 * 13 11 10 15 15 H 1.09000 * 113.60957 * 89.19849 * 14 13 11 16 16 O 1.42896 * 113.61428 * 220.01627 * 14 13 11 17 17 C 1.53777 * 87.08016 * 334.56819 * 14 13 11 18 18 C 1.36224 * 113.01656 * 0.40274 * 6 5 4 19 19 Cl 1.73604 * 124.60546 * 179.78579 * 18 6 5 20 20 S 1.70444 * 110.78856 * 359.78223 * 18 6 5 21 21 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 22 22 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 23 23 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 24 24 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 25 25 H 1.07989 * 123.45413 * 0.02562 * 5 4 2 26 26 H 0.96998 * 119.99816 * 359.97438 * 9 7 6 27 27 H 1.08997 * 109.47031 * 299.99334 * 10 9 7 28 28 H 1.09004 * 109.47300 * 59.99490 * 10 9 7 29 29 H 1.08997 * 113.61486 * 254.52914 * 13 11 10 30 30 H 1.09003 * 113.61287 * 25.34699 * 13 11 10 31 31 H 0.96701 * 113.99855 * 179.97438 * 16 14 13 32 32 H 1.09002 * 113.61847 * 270.88093 * 17 14 13 33 33 H 1.08999 * 113.61471 * 139.98090 * 17 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.7436 -1.9985 1.4883 6 6 2.3346 -2.4184 2.7383 7 6 2.2668 -3.7971 3.2453 8 8 2.7836 -4.0799 4.3096 9 7 1.6321 -4.7473 2.5307 10 6 1.5641 -6.1207 3.0360 11 6 0.7941 -6.9924 2.0419 12 1 1.0820 -6.8089 1.0068 13 6 0.7697 -8.4829 2.4196 14 6 -0.6965 -8.4955 1.9559 15 1 -0.8176 -8.7245 0.8971 16 8 -1.5551 -9.2724 2.7934 17 6 -0.7267 -6.9905 2.2699 18 6 2.9564 -1.4035 3.4010 19 17 3.7597 -1.5713 4.9308 20 16 2.8385 0.0533 2.5242 21 1 -0.3934 0.4418 0.7650 22 1 1.7924 -0.5139 -0.8899 23 1 3.5346 1.7702 0.0322 24 1 1.5616 2.4678 -1.2086 25 1 1.2065 -2.6651 0.8301 26 1 1.2198 -4.5217 1.6822 27 1 2.5735 -6.5134 3.1582 28 1 1.0521 -6.1289 3.9984 29 1 1.4268 -9.0995 1.8065 30 1 0.8930 -8.6648 3.4872 31 1 -2.4786 -9.2838 2.5071 32 1 -1.0139 -6.7643 3.2968 33 1 -1.2775 -6.4022 1.5360 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12309068_13431040.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:37:58 Heat of formation + Delta-G solvation = -62.320392 kcal Electronic energy + Delta-G solvation = -19963.426772 eV Core-core repulsion = 16530.277426 eV Total energy + Delta-G solvation = -3433.149346 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.037 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.22312 -40.21670 -38.87965 -37.99728 -36.96412 -36.59597 -35.02327 -31.70593 -29.32559 -26.86499 -26.71818 -25.50647 -23.15467 -22.25589 -21.03490 -20.27800 -19.39522 -18.60174 -17.96971 -17.68894 -16.95269 -16.63522 -16.36156 -16.08322 -15.79781 -15.68417 -15.11660 -14.93227 -14.68502 -14.34344 -14.31287 -14.06194 -13.50083 -13.44143 -12.92393 -12.64618 -12.60837 -12.44548 -12.37947 -12.15413 -11.87537 -11.86083 -11.29367 -11.01880 -10.70583 -10.57847 -10.24111 -9.90408 -9.64649 -5.13665 -0.64243 -0.19888 0.47419 0.71258 1.03643 1.18992 1.58208 1.90324 2.12353 2.15502 3.26480 3.30540 3.48359 3.58654 3.60996 3.81111 3.83692 3.88091 3.99604 4.20671 4.34446 4.38702 4.45908 4.64877 4.76305 4.78501 4.80809 4.83848 4.96114 5.00701 5.13701 5.29668 5.46017 6.42584 6.70012 6.89867 7.11292 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.018 4.018 3 Si 0.712 3.288 4 C -0.228 4.228 5 C -0.068 4.068 6 C -0.168 4.168 7 C 0.567 3.433 8 O -0.563 6.563 9 N -0.706 5.706 10 C 0.135 3.865 11 C -0.109 4.109 12 H 0.123 0.877 13 C -0.129 4.129 14 C 0.072 3.928 15 H 0.103 0.897 16 O -0.586 6.586 17 C -0.160 4.160 18 C -0.140 4.140 19 Cl 0.002 6.998 20 S 0.267 5.733 21 H 0.398 0.602 22 H 0.136 0.864 23 H -0.262 1.262 24 H -0.266 1.266 25 H 0.181 0.819 26 H 0.415 0.585 27 H 0.061 0.939 28 H 0.055 0.945 29 H 0.085 0.915 30 H 0.076 0.924 31 H 0.394 0.606 32 H 0.075 0.925 33 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.059 2.941 -5.892 7.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.132 4.132 3 Si 0.615 3.385 4 C -0.346 4.346 5 C -0.097 4.097 6 C -0.187 4.187 7 C 0.353 3.647 8 O -0.443 6.443 9 N -0.359 5.359 10 C 0.011 3.989 11 C -0.128 4.128 12 H 0.141 0.859 13 C -0.167 4.167 14 C 0.014 3.986 15 H 0.120 0.880 16 O -0.394 6.394 17 C -0.198 4.198 18 C -0.287 4.287 19 Cl 0.031 6.969 20 S 0.532 5.468 21 H 0.249 0.751 22 H 0.153 0.847 23 H -0.188 1.188 24 H -0.191 1.191 25 H 0.198 0.802 26 H 0.253 0.747 27 H 0.079 0.921 28 H 0.074 0.926 29 H 0.104 0.896 30 H 0.095 0.905 31 H 0.245 0.755 32 H 0.094 0.906 33 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -2.000 4.370 -5.384 7.217 hybrid contribution -0.778 -1.960 -0.429 2.152 sum -2.778 2.409 -5.814 6.879 Atomic orbital electron populations 1.86516 1.16123 1.81970 1.50470 1.24433 0.85510 1.08722 0.94507 0.94309 0.79811 0.75893 0.88475 1.24962 1.08217 0.98665 1.02756 1.21127 0.98938 0.95560 0.94028 1.20331 1.06388 0.94018 0.98004 1.17745 0.78361 0.84694 0.83919 1.90862 1.47505 1.82528 1.23446 1.45686 1.56416 1.08887 1.24888 1.21302 1.00400 0.80132 0.97016 1.22522 0.95452 0.94427 1.00360 0.85927 1.23095 0.95670 0.95560 1.02405 1.23469 0.90550 0.89898 0.94706 0.87964 1.86499 1.24216 1.73243 1.55437 1.23728 0.95754 0.97563 1.02733 1.25826 1.04705 1.02233 0.95916 1.98426 1.76447 1.97521 1.24536 1.83174 1.50070 1.04735 1.08772 0.75131 0.84724 1.18815 1.19057 0.80223 0.74729 0.92061 0.92622 0.89593 0.90520 0.75549 0.90621 0.89296 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 3.60 12.88 -148.98 -1.92 1.68 16 2 C -0.02 0.13 2.94 71.24 0.21 0.34 16 3 Si 0.71 -4.37 30.92 68.60 2.12 -2.25 16 4 C -0.23 1.12 5.65 24.52 0.14 1.26 16 5 C -0.07 0.26 9.75 22.70 0.22 0.49 16 6 C -0.17 -0.49 5.98 -19.84 -0.12 -0.61 16 7 C 0.57 3.81 7.79 86.56 0.67 4.49 16 8 O -0.56 -8.55 14.91 -4.20 -0.06 -8.61 16 9 N -0.71 0.29 5.53 -466.73 -2.58 -2.29 16 10 C 0.14 0.07 5.51 86.38 0.48 0.54 16 11 C -0.11 0.53 3.76 -10.27 -0.04 0.49 16 12 H 0.12 -1.10 8.14 -2.39 -0.02 -1.12 16 13 C -0.13 0.23 7.47 31.12 0.23 0.47 16 14 C 0.07 -0.22 5.21 31.12 0.16 -0.05 16 15 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 16 O -0.59 -0.66 13.67 -148.98 -2.04 -2.70 16 17 C -0.16 0.70 7.46 31.12 0.23 0.93 16 18 C -0.14 -0.58 6.87 67.35 0.46 -0.12 16 19 Cl 0.00 0.02 27.20 -2.72 -0.07 -0.06 16 20 S 0.27 -0.71 20.19 -56.49 -1.14 -1.85 16 21 H 0.40 -5.48 8.70 -74.06 -0.64 -6.12 16 22 H 0.14 -1.06 7.96 -2.39 -0.02 -1.08 16 23 H -0.26 0.36 7.11 99.48 0.71 1.07 16 24 H -0.27 -0.06 7.11 99.48 0.71 0.65 16 25 H 0.18 -1.67 7.10 -2.92 -0.02 -1.69 16 26 H 0.42 -2.92 7.02 -92.71 -0.65 -3.57 16 27 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 28 H 0.06 0.24 7.84 -2.38 -0.02 0.22 16 29 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 30 H 0.08 0.15 8.10 -2.39 -0.02 0.13 16 31 H 0.39 -2.82 9.12 -74.06 -0.68 -3.49 16 32 H 0.08 -0.03 7.90 -2.39 -0.02 -0.05 16 33 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 Total: 0.00 -20.69 312.35 -3.79 -24.48 By element: Atomic # 1 Polarization: -15.87 SS G_CDS: -0.75 Total: -16.62 kcal Atomic # 6 Polarization: 5.57 SS G_CDS: 2.65 Total: 8.22 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -2.58 Total: -2.29 kcal Atomic # 8 Polarization: -5.61 SS G_CDS: -4.02 Total: -9.62 kcal Atomic # 14 Polarization: -4.37 SS G_CDS: 2.12 Total: -2.25 kcal Atomic # 16 Polarization: -0.71 SS G_CDS: -1.14 Total: -1.85 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.07 Total: -0.06 kcal Total: -20.69 -3.79 -24.48 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_13431040.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.841 kcal (2) G-P(sol) polarization free energy of solvation -20.688 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.529 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.792 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.479 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds