Wall clock time and date at job start Sat Mar 6 2021 20:38:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.37873 * 126.45301 * 2 1 4 4 C 1.46676 * 126.23694 * 0.25018 * 3 2 1 5 5 O 1.21698 * 119.99871 * 359.97438 * 4 3 2 6 6 N 1.34774 * 120.00487 * 179.97438 * 4 3 2 7 7 C 1.46496 * 120.00360 * 179.97438 * 6 4 3 8 8 C 1.52995 * 109.47358 * 180.02562 * 7 6 4 9 9 H 1.09002 * 112.85249 * 43.79938 * 8 7 6 10 10 C 1.53775 * 113.61864 * 175.00276 * 8 7 6 11 11 C 1.53774 * 87.08376 * 139.98056 * 10 8 7 12 12 H 1.08998 * 113.61686 * 89.20065 * 11 10 8 13 13 O 1.42907 * 113.61334 * 220.01943 * 11 10 8 14 14 C 1.53775 * 87.08361 * 334.56588 * 11 10 8 15 15 N 1.37650 * 107.53366 * 180.26415 * 3 2 1 16 16 C 1.35539 * 108.64115 * 0.02562 * 15 3 2 17 17 C 1.50704 * 125.56134 * 179.97438 * 16 15 3 18 18 O 1.42898 * 109.46900 * 245.04135 * 17 16 15 19 19 Si 1.86297 * 109.47282 * 5.04171 * 17 16 15 20 20 C 1.35445 * 108.87398 * 359.97438 * 16 15 3 21 21 H 1.09004 * 109.46730 * 269.70326 * 1 2 3 22 22 H 1.08995 * 109.47255 * 29.70760 * 1 2 3 23 23 H 1.08997 * 109.47149 * 149.71323 * 1 2 3 24 24 H 0.96997 * 119.99473 * 359.97438 * 6 4 3 25 25 H 1.08994 * 109.47294 * 300.00159 * 7 6 4 26 26 H 1.09001 * 109.47200 * 60.00060 * 7 6 4 27 27 H 1.09000 * 113.61770 * 254.53173 * 10 8 7 28 28 H 1.09001 * 113.61468 * 25.34782 * 10 8 7 29 29 H 0.96698 * 113.99769 * 179.97438 * 13 11 10 30 30 H 1.08999 * 113.61566 * 270.88695 * 14 11 10 31 31 H 1.08999 * 113.61331 * 139.97843 * 14 11 10 32 32 H 0.96996 * 125.68432 * 179.97438 * 15 3 2 33 33 H 1.09001 * 109.46830 * 125.03851 * 17 16 15 34 34 H 0.96695 * 114.00084 * 60.00177 * 18 17 16 35 35 H 1.48506 * 110.00079 * 58.68072 * 19 17 16 36 36 H 1.48500 * 110.00349 * 179.97438 * 19 17 16 37 37 H 1.08001 * 126.07235 * 180.02562 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1090 0.0000 4 6 1.8898 2.5093 0.0052 5 8 0.7026 2.7766 0.0096 6 7 2.8035 3.5000 0.0050 7 6 2.3676 4.8986 0.0096 8 6 3.5930 5.8148 0.0078 9 1 4.3639 5.4892 -0.6906 10 6 3.2455 7.3081 -0.1104 11 6 4.3591 7.5680 0.9178 12 1 5.3401 7.7235 0.4690 13 8 4.0253 8.5680 1.8826 14 6 4.1276 6.1312 1.4146 15 7 3.6284 0.6627 -0.0061 16 6 3.6218 -0.6927 -0.0103 17 6 4.8435 -1.5751 -0.0180 18 8 4.8918 -2.3109 -1.2420 19 14 6.3719 -0.5209 0.1336 20 6 2.3380 -1.1246 -0.0065 21 1 -0.3633 -0.0053 1.0277 22 1 -0.3633 0.8925 -0.5093 23 1 -0.3633 -0.8874 -0.5183 24 1 3.7498 3.2869 0.0019 25 1 1.7665 5.0948 -0.8781 26 1 1.7714 5.0904 0.9017 27 1 3.4531 7.7282 -1.0945 28 1 2.2478 7.5543 0.2530 29 1 4.7217 8.7356 2.5322 30 1 3.3716 6.0559 2.1962 31 1 5.0475 5.6012 1.6616 32 1 4.4190 1.2245 -0.0078 33 1 4.7959 -2.2688 0.8214 34 1 4.9354 -1.7563 -2.0329 35 1 6.3188 0.2735 1.3872 36 1 7.5837 -1.3792 0.1278 37 1 2.0137 -2.1548 -0.0081 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_13940406.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:03 Heat of formation + Delta-G solvation = -48.529641 kcal Electronic energy + Delta-G solvation = -20210.382967 eV Core-core repulsion = 16955.741790 eV Total energy + Delta-G solvation = -3254.641177 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.60237 -40.83658 -39.80795 -37.82089 -36.67020 -35.18444 -33.55259 -31.61691 -29.17598 -28.25002 -26.91410 -26.51383 -23.65885 -22.38274 -21.61107 -20.95394 -20.21191 -19.69397 -18.54321 -17.92031 -17.04946 -16.85709 -16.75682 -16.42403 -16.19115 -15.49834 -15.25069 -15.01459 -14.76391 -14.47796 -14.26723 -13.91146 -13.59636 -13.51622 -13.46884 -13.37028 -12.94758 -12.74507 -12.62283 -12.57581 -12.26676 -12.02345 -11.48355 -11.00631 -10.82817 -10.66238 -10.21108 -9.78470 -9.14721 -5.42940 0.34855 0.93436 1.26019 1.62065 1.66463 1.89416 2.03044 2.38438 3.08706 3.24285 3.32016 3.39665 3.56065 3.62272 3.74640 3.81665 4.04002 4.16933 4.18682 4.30542 4.33344 4.53612 4.59107 4.66173 4.74082 4.79078 4.83939 4.94794 4.97599 5.04817 5.17038 5.23633 5.31481 5.48773 5.68936 5.93530 6.18900 6.37768 6.41551 6.59816 7.14482 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.068 4.068 3 C -0.052 4.052 4 C 0.589 3.411 5 O -0.520 6.520 6 N -0.733 5.733 7 C 0.133 3.867 8 C -0.125 4.125 9 H 0.100 0.900 10 C -0.119 4.119 11 C 0.076 3.924 12 H 0.083 0.917 13 O -0.559 6.559 14 C -0.167 4.167 15 N -0.535 5.535 16 C 0.014 3.986 17 C -0.037 4.037 18 O -0.531 6.531 19 Si 0.669 3.331 20 C -0.172 4.172 21 H 0.068 0.932 22 H 0.081 0.919 23 H 0.065 0.935 24 H 0.393 0.607 25 H 0.075 0.925 26 H 0.074 0.926 27 H 0.079 0.921 28 H 0.096 0.904 29 H 0.380 0.620 30 H 0.093 0.907 31 H 0.070 0.930 32 H 0.410 0.590 33 H 0.129 0.871 34 H 0.381 0.619 35 H -0.250 1.250 36 H -0.242 1.242 37 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.806 1.657 -1.543 6.232 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.077 4.077 3 C -0.164 4.164 4 C 0.377 3.623 5 O -0.396 6.396 6 N -0.384 5.384 7 C 0.010 3.990 8 C -0.144 4.144 9 H 0.118 0.882 10 C -0.157 4.157 11 C 0.016 3.984 12 H 0.101 0.899 13 O -0.365 6.365 14 C -0.204 4.204 15 N -0.136 5.136 16 C -0.102 4.102 17 C -0.150 4.150 18 O -0.336 6.336 19 Si 0.569 3.431 20 C -0.197 4.197 21 H 0.087 0.913 22 H 0.100 0.900 23 H 0.084 0.916 24 H 0.226 0.774 25 H 0.093 0.907 26 H 0.092 0.908 27 H 0.098 0.902 28 H 0.114 0.886 29 H 0.227 0.773 30 H 0.111 0.889 31 H 0.088 0.912 32 H 0.249 0.751 33 H 0.146 0.854 34 H 0.228 0.772 35 H -0.175 1.175 36 H -0.165 1.165 37 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 5.190 1.697 -1.001 5.552 hybrid contribution 1.134 -0.290 0.632 1.330 sum 6.324 1.407 -0.369 6.490 Atomic orbital electron populations 1.20394 0.88906 1.03237 1.02494 1.20049 0.96095 0.90527 1.00993 1.20178 0.83308 0.93492 1.19460 1.17018 0.85857 0.82924 0.76491 1.90853 1.15889 1.83131 1.49688 1.45875 1.09217 1.06578 1.76775 1.21366 0.95941 0.78572 1.03129 1.22593 0.97980 0.95422 0.98418 0.88173 1.23040 1.00097 0.93497 0.99059 1.23311 0.98097 0.86537 0.90407 0.89895 1.86548 1.46013 1.59419 1.44496 1.23821 1.02099 0.97518 0.96986 1.41964 1.07040 1.06341 1.58274 1.20845 0.97779 0.82617 1.08995 1.24534 1.00683 0.98718 0.91020 1.86566 1.96541 1.35752 1.14717 0.95623 0.77710 0.83349 0.86377 1.20647 0.90563 0.99129 1.09332 0.91298 0.89996 0.91650 0.77370 0.90682 0.90764 0.90223 0.88577 0.77276 0.88852 0.91157 0.75067 0.85402 0.77163 1.17482 1.16495 0.83569 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.22 9.83 36.01 0.35 0.13 16 2 C -0.07 -0.17 6.21 -104.16 -0.65 -0.82 16 3 C -0.05 -0.08 7.06 -81.98 -0.58 -0.66 16 4 C 0.59 1.39 7.79 -12.86 -0.10 1.29 16 5 O -0.52 -3.08 14.80 5.19 0.08 -3.00 16 6 N -0.73 0.79 5.55 -61.63 -0.34 0.44 16 7 C 0.13 -0.13 5.51 -4.05 -0.02 -0.15 16 8 C -0.13 0.37 3.75 -89.81 -0.34 0.04 16 9 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 10 C -0.12 0.21 7.47 -25.93 -0.19 0.01 16 11 C 0.08 -0.14 5.21 -25.93 -0.14 -0.27 16 12 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 13 O -0.56 -0.01 13.67 -35.23 -0.48 -0.50 16 14 C -0.17 0.42 7.46 -25.92 -0.19 0.22 16 15 N -0.54 0.75 5.47 -5.69 -0.03 0.72 16 16 C 0.01 -0.01 6.10 -81.95 -0.50 -0.51 16 17 C -0.04 0.07 2.98 36.01 0.11 0.17 16 18 O -0.53 0.57 12.88 -35.23 -0.45 0.12 16 19 Si 0.67 -2.22 30.98 -169.99 -5.27 -7.48 16 20 C -0.17 -0.24 10.66 -39.98 -0.43 -0.67 16 21 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 22 H 0.08 0.31 6.48 -51.93 -0.34 -0.03 16 23 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 24 H 0.39 -1.58 7.60 -40.82 -0.31 -1.89 16 25 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 26 H 0.07 0.03 7.84 -51.93 -0.41 -0.37 16 27 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 29 H 0.38 -1.49 9.12 45.56 0.42 -1.07 16 30 H 0.09 -0.10 7.90 -51.93 -0.41 -0.51 16 31 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 32 H 0.41 -1.86 6.00 -40.82 -0.24 -2.10 16 33 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 34 H 0.38 -1.85 8.70 45.56 0.40 -1.45 16 35 H -0.25 0.32 7.11 56.52 0.40 0.72 16 36 H -0.24 -0.04 7.11 56.52 0.40 0.37 16 37 H 0.15 0.11 8.06 -52.49 -0.42 -0.31 16 LS Contribution 312.34 15.07 4.71 4.71 Total: 0.00 -9.05 312.34 -8.77 -17.82 By element: Atomic # 1 Polarization: -7.32 SS G_CDS: -4.31 Total: -11.63 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -2.67 Total: -1.21 kcal Atomic # 7 Polarization: 1.54 SS G_CDS: -0.37 Total: 1.17 kcal Atomic # 8 Polarization: -2.52 SS G_CDS: -0.86 Total: -3.38 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: -5.27 Total: -7.48 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -9.05 -8.77 -17.82 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_13940406.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.705 kcal (2) G-P(sol) polarization free energy of solvation -9.052 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.757 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.772 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.825 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.530 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds