Wall clock time and date at job start Sat Mar 6 2021 20:38:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.46892 * 2 1 4 4 C 1.50694 * 109.47042 * 239.99885 * 2 1 3 5 5 C 1.38248 * 119.96887 * 120.02047 * 4 2 1 6 6 C 1.38291 * 120.11002 * 180.02562 * 5 4 2 7 7 C 1.38122 * 120.05305 * 359.67808 * 6 5 4 8 8 C 1.38755 * 119.94838 * 0.60086 * 7 6 5 9 9 O 1.35896 * 120.05792 * 179.69939 * 8 7 6 10 10 C 1.42895 * 117.00033 * 359.72130 * 9 8 7 11 11 C 1.53002 * 109.47074 * 179.97438 * 10 9 8 12 12 C 1.50696 * 109.47300 * 180.02562 * 11 10 9 13 13 O 1.21284 * 120.00109 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00137 * 179.97438 * 12 11 10 15 15 C 1.46506 * 119.99873 * 179.97438 * 14 12 11 16 16 C 1.52999 * 109.46684 * 180.02562 * 15 14 12 17 17 H 1.08995 * 112.85385 * 316.19445 * 16 15 14 18 18 C 1.53778 * 113.61377 * 87.50778 * 16 15 14 19 19 C 1.53781 * 87.08330 * 139.97641 * 18 16 15 20 20 H 1.09001 * 113.61407 * 89.11889 * 19 18 16 21 21 O 1.42900 * 113.69268 * 220.00554 * 19 18 16 22 22 C 1.53774 * 87.07980 * 334.56637 * 19 18 16 23 23 C 1.38163 * 119.97588 * 300.00425 * 4 2 1 24 24 H 0.96700 * 113.99928 * 299.99824 * 1 2 3 25 25 H 1.09005 * 109.46878 * 119.99700 * 2 1 3 26 26 H 1.48501 * 110.00307 * 299.99951 * 3 2 1 27 27 H 1.48508 * 110.00115 * 61.32133 * 3 2 1 28 28 H 1.07997 * 119.94820 * 359.97438 * 5 4 2 29 29 H 1.07997 * 119.97437 * 179.97438 * 6 5 4 30 30 H 1.08005 * 120.02789 * 180.32396 * 7 6 5 31 31 H 1.09000 * 109.47137 * 60.00761 * 10 9 8 32 32 H 1.08987 * 109.47421 * 300.00010 * 10 9 8 33 33 H 1.09004 * 109.46930 * 60.00229 * 11 10 9 34 34 H 1.09000 * 109.47312 * 300.00173 * 11 10 9 35 35 H 0.96995 * 120.00018 * 0.27749 * 14 12 11 36 36 H 1.09000 * 109.47212 * 300.00355 * 15 14 12 37 37 H 1.09001 * 109.46577 * 60.00430 * 15 14 12 38 38 H 1.09003 * 113.61683 * 254.52849 * 18 16 15 39 39 H 1.09008 * 113.61715 * 25.42811 * 18 16 15 40 40 H 0.96697 * 114.00023 * 277.53857 * 21 19 18 41 41 H 1.08999 * 113.61743 * 270.88146 * 22 19 18 42 42 H 1.09008 * 113.61375 * 139.97992 * 22 19 18 43 43 H 1.08004 * 120.02445 * 0.03918 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7265 -0.0381 -2.1398 6 6 3.1886 -0.6870 -3.2702 7 6 2.8621 -2.0110 -3.4898 8 6 2.0594 -2.6864 -2.5816 9 8 1.7317 -3.9872 -2.7986 10 6 2.2436 -4.5958 -3.9859 11 6 1.7731 -6.0499 -4.0572 12 6 2.3134 -6.6919 -5.3090 13 8 3.0069 -6.0498 -6.0691 14 7 2.0268 -7.9800 -5.5834 15 6 2.5516 -8.6039 -6.8006 16 6 2.0813 -10.0580 -6.8718 17 1 2.1647 -10.5771 -5.9170 18 6 0.7125 -10.2302 -7.5512 19 6 1.2922 -11.4856 -8.2239 20 1 1.1585 -12.3956 -7.6390 21 8 0.8972 -11.6401 -9.5885 22 6 2.6780 -10.8414 -8.0529 23 6 1.5972 -2.0332 -1.4486 24 1 -0.3933 0.4417 0.7651 25 1 1.7924 -0.5138 0.8901 26 1 1.5615 2.4679 -1.2085 27 1 1.5879 2.4586 1.2243 28 1 2.9865 0.9959 -1.9676 29 1 3.8092 -0.1596 -3.9794 30 1 3.2275 -2.5189 -4.3702 31 1 3.3330 -4.5673 -3.9681 32 1 1.8801 -4.0528 -4.8582 33 1 0.6836 -6.0789 -4.0748 34 1 2.1370 -6.5927 -3.1848 35 1 1.4695 -8.4926 -4.9772 36 1 2.1873 -8.0614 -7.6730 37 1 3.6411 -8.5744 -6.7832 38 1 -0.0976 -10.4431 -6.8536 39 1 0.4695 -9.4317 -8.2524 40 1 0.0264 -12.0448 -9.7025 41 1 2.9725 -10.2101 -8.8913 42 1 3.4549 -11.5479 -7.7604 43 1 0.9757 -2.5578 -0.7380 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_4549614.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:23 Heat of formation + Delta-G solvation = -104.039715 kcal Electronic energy + Delta-G solvation = -23988.865850 eV Core-core repulsion = 20194.797534 eV Total energy + Delta-G solvation = -3794.068315 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.34275 -40.95198 -40.16401 -38.97443 -37.38283 -36.66289 -35.06771 -33.34173 -32.50629 -30.85658 -29.00128 -26.94859 -26.86567 -25.23593 -23.56097 -23.33075 -21.94303 -21.49698 -20.55702 -19.14593 -18.62808 -18.50511 -17.78535 -17.48357 -17.31801 -17.06488 -16.82653 -16.55421 -16.16524 -15.76618 -15.60990 -15.26606 -15.11305 -14.53926 -14.44995 -14.29876 -14.12038 -13.86549 -13.57877 -13.51673 -13.36541 -12.93129 -12.88759 -12.71992 -12.60055 -12.29570 -12.01025 -11.91336 -11.75501 -11.59986 -11.46464 -11.04405 -10.82504 -10.53419 -10.17562 -9.79119 -9.14275 -4.93735 0.31223 0.51569 1.28580 1.53525 1.61517 1.71489 1.98144 2.47301 2.72704 3.10685 3.33405 3.35480 3.41561 3.54091 3.64090 3.76644 3.80683 3.84332 3.91214 3.95408 4.08354 4.14814 4.18966 4.27505 4.32056 4.34611 4.50226 4.54573 4.59675 4.62547 4.66119 4.67520 4.74213 4.76454 4.85257 4.98931 5.07268 5.19598 5.34110 5.35847 5.48001 5.56331 5.76791 6.32852 6.44592 6.45868 6.61329 7.09202 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.077 4.077 3 Si 0.686 3.314 4 C -0.036 4.036 5 C -0.152 4.152 6 C -0.073 4.073 7 C -0.203 4.203 8 C 0.132 3.868 9 O -0.317 6.317 10 C 0.074 3.926 11 C -0.141 4.141 12 C 0.519 3.481 13 O -0.538 6.538 14 N -0.728 5.728 15 C 0.131 3.869 16 C -0.125 4.125 17 H 0.101 0.899 18 C -0.166 4.166 19 C 0.075 3.925 20 H 0.083 0.917 21 O -0.560 6.560 22 C -0.120 4.120 23 C -0.124 4.124 24 H 0.380 0.620 25 H 0.079 0.921 26 H -0.255 1.255 27 H -0.261 1.261 28 H 0.129 0.871 29 H 0.132 0.868 30 H 0.133 0.867 31 H 0.073 0.927 32 H 0.072 0.928 33 H 0.107 0.893 34 H 0.107 0.893 35 H 0.403 0.597 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.071 0.929 39 H 0.092 0.908 40 H 0.380 0.620 41 H 0.095 0.905 42 H 0.079 0.921 43 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.064 -3.641 2.975 4.702 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.187 4.187 3 Si 0.587 3.413 4 C -0.037 4.037 5 C -0.170 4.170 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.231 6.231 10 C -0.001 4.001 11 C -0.181 4.181 12 C 0.305 3.695 13 O -0.415 6.415 14 N -0.380 5.380 15 C 0.008 3.992 16 C -0.143 4.143 17 H 0.119 0.881 18 C -0.203 4.203 19 C 0.016 3.984 20 H 0.101 0.899 21 O -0.365 6.365 22 C -0.158 4.158 23 C -0.143 4.143 24 H 0.228 0.772 25 H 0.096 0.904 26 H -0.179 1.179 27 H -0.187 1.187 28 H 0.146 0.854 29 H 0.150 0.850 30 H 0.151 0.849 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.125 0.875 34 H 0.126 0.874 35 H 0.237 0.763 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.090 0.910 39 H 0.111 0.889 40 H 0.227 0.773 41 H 0.114 0.886 42 H 0.097 0.903 43 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 0.923 -2.518 1.862 3.264 hybrid contribution -1.880 -0.757 0.779 2.171 sum -0.957 -3.275 2.641 4.314 Atomic orbital electron populations 1.86599 1.17674 1.80210 1.49751 1.24839 0.84580 1.11102 0.98158 0.94958 0.91760 0.74343 0.80234 1.19008 0.96687 0.93031 0.94935 1.20857 1.01137 0.99821 0.95197 1.20900 0.97952 0.93674 0.96532 1.21388 1.03076 0.96491 1.01170 1.18923 0.94690 0.83205 0.94510 1.85965 1.71214 1.22782 1.43093 1.22410 0.99361 0.92046 0.86308 1.21465 1.03886 0.95453 0.97312 1.20301 0.80334 0.81805 0.87046 1.90760 1.38009 1.62619 1.50099 1.45947 1.53972 1.12266 1.25819 1.21367 0.99319 0.91442 0.87121 1.22583 0.97445 0.95185 0.99125 0.88111 1.23811 0.96644 0.99803 1.00086 1.23313 0.96080 0.96075 0.82928 0.89891 1.86542 1.39955 1.84856 1.25156 1.23052 0.96023 0.99016 0.97700 1.20200 1.02833 0.94095 0.97154 0.77206 0.90352 1.17939 1.18664 0.85384 0.85040 0.84931 0.90858 0.90937 0.87489 0.87447 0.76254 0.90947 0.90905 0.91014 0.88912 0.77256 0.88643 0.90260 0.84985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.98 12.74 -35.23 -0.45 -1.43 16 2 C -0.08 -0.05 2.81 36.00 0.10 0.05 16 3 Si 0.69 -0.29 29.79 -169.99 -5.06 -5.36 16 4 C -0.04 -0.08 5.42 -104.65 -0.57 -0.65 16 5 C -0.15 -0.22 8.67 -39.56 -0.34 -0.56 16 6 C -0.07 -0.09 10.04 -39.60 -0.40 -0.49 16 7 C -0.20 -0.43 9.04 -39.43 -0.36 -0.79 16 8 C 0.13 0.41 6.69 -39.22 -0.26 0.15 16 9 O -0.32 -0.81 10.14 -19.41 -0.20 -1.01 16 10 C 0.07 0.06 4.03 37.16 0.15 0.21 16 11 C -0.14 0.20 6.07 -27.88 -0.17 0.03 16 12 C 0.52 0.35 7.83 -10.99 -0.09 0.26 16 13 O -0.54 -2.61 15.98 5.55 0.09 -2.52 16 14 N -0.73 1.25 5.56 -60.29 -0.33 0.91 16 15 C 0.13 -0.13 5.51 -4.04 -0.02 -0.16 16 16 C -0.12 0.34 3.76 -89.81 -0.34 0.00 16 17 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 18 C -0.17 0.38 7.46 -25.92 -0.19 0.19 16 19 C 0.08 -0.12 5.21 -25.92 -0.14 -0.25 16 20 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 21 O -0.56 -0.12 13.67 -35.23 -0.48 -0.60 16 22 C -0.12 0.18 7.47 -25.92 -0.19 -0.02 16 23 C -0.12 -0.39 9.55 -39.43 -0.38 -0.77 16 24 H 0.38 -0.88 8.74 45.56 0.40 -0.49 16 25 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 26 H -0.25 -0.72 7.11 56.52 0.40 -0.31 16 27 H -0.26 -0.37 7.11 56.52 0.40 0.04 16 28 H 0.13 -0.07 4.87 -52.49 -0.26 -0.33 16 29 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 30 H 0.13 0.13 6.30 -52.48 -0.33 -0.20 16 31 H 0.07 0.08 7.61 -51.93 -0.39 -0.32 16 32 H 0.07 0.10 7.63 -51.94 -0.40 -0.30 16 33 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 34 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 35 H 0.40 -1.80 8.47 -40.82 -0.35 -2.14 16 36 H 0.07 0.03 7.84 -51.93 -0.41 -0.38 16 37 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 38 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 39 H 0.09 -0.09 7.90 -51.92 -0.41 -0.50 16 40 H 0.38 -1.43 9.12 45.56 0.42 -1.01 16 41 H 0.10 -0.03 8.10 -51.93 -0.42 -0.45 16 42 H 0.08 -0.16 8.14 -51.92 -0.42 -0.59 16 43 H 0.13 0.37 8.06 -52.48 -0.42 -0.06 16 LS Contribution 359.30 15.07 5.41 5.41 Total: 0.00 -9.72 359.30 -9.77 -19.50 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -5.56 Total: -12.12 kcal Atomic # 6 Polarization: 0.41 SS G_CDS: -3.19 Total: -2.78 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -0.33 Total: 0.91 kcal Atomic # 8 Polarization: -4.53 SS G_CDS: -1.04 Total: -5.57 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.06 Total: -5.36 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -9.72 -9.77 -19.50 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_4549614.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.541 kcal (2) G-P(sol) polarization free energy of solvation -9.724 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.265 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.775 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.499 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds