Wall clock time and date at job start Sat Mar 6 2021 20:38:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.46892 * 2 1 4 4 C 1.50694 * 109.47042 * 239.99885 * 2 1 3 5 5 C 1.38248 * 119.96887 * 120.02047 * 4 2 1 6 6 C 1.38291 * 120.11002 * 180.02562 * 5 4 2 7 7 C 1.38122 * 120.05305 * 359.67808 * 6 5 4 8 8 C 1.38755 * 119.94838 * 0.60086 * 7 6 5 9 9 O 1.35896 * 120.05792 * 179.69939 * 8 7 6 10 10 C 1.42895 * 117.00033 * 359.72130 * 9 8 7 11 11 C 1.53002 * 109.47074 * 179.97438 * 10 9 8 12 12 C 1.50696 * 109.47300 * 180.02562 * 11 10 9 13 13 O 1.21284 * 120.00109 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00137 * 179.97438 * 12 11 10 15 15 C 1.46506 * 119.99873 * 179.97438 * 14 12 11 16 16 C 1.52999 * 109.46684 * 180.02562 * 15 14 12 17 17 H 1.08995 * 112.85385 * 316.19445 * 16 15 14 18 18 C 1.53778 * 113.61377 * 87.50778 * 16 15 14 19 19 C 1.53781 * 87.08330 * 139.97641 * 18 16 15 20 20 H 1.09001 * 113.61407 * 89.11889 * 19 18 16 21 21 O 1.42900 * 113.69268 * 220.00554 * 19 18 16 22 22 C 1.53774 * 87.07980 * 334.56637 * 19 18 16 23 23 C 1.38163 * 119.97588 * 300.00425 * 4 2 1 24 24 H 0.96700 * 113.99928 * 299.99824 * 1 2 3 25 25 H 1.09005 * 109.46878 * 119.99700 * 2 1 3 26 26 H 1.48501 * 110.00307 * 299.99951 * 3 2 1 27 27 H 1.48508 * 110.00115 * 61.32133 * 3 2 1 28 28 H 1.07997 * 119.94820 * 359.97438 * 5 4 2 29 29 H 1.07997 * 119.97437 * 179.97438 * 6 5 4 30 30 H 1.08005 * 120.02789 * 180.32396 * 7 6 5 31 31 H 1.09000 * 109.47137 * 60.00761 * 10 9 8 32 32 H 1.08987 * 109.47421 * 300.00010 * 10 9 8 33 33 H 1.09004 * 109.46930 * 60.00229 * 11 10 9 34 34 H 1.09000 * 109.47312 * 300.00173 * 11 10 9 35 35 H 0.96995 * 120.00018 * 0.27749 * 14 12 11 36 36 H 1.09000 * 109.47212 * 300.00355 * 15 14 12 37 37 H 1.09001 * 109.46577 * 60.00430 * 15 14 12 38 38 H 1.09003 * 113.61683 * 254.52849 * 18 16 15 39 39 H 1.09008 * 113.61715 * 25.42811 * 18 16 15 40 40 H 0.96697 * 114.00023 * 277.53857 * 21 19 18 41 41 H 1.08999 * 113.61743 * 270.88146 * 22 19 18 42 42 H 1.09008 * 113.61375 * 139.97992 * 22 19 18 43 43 H 1.08004 * 120.02445 * 0.03918 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7265 -0.0381 -2.1398 6 6 3.1886 -0.6870 -3.2702 7 6 2.8621 -2.0110 -3.4898 8 6 2.0594 -2.6864 -2.5816 9 8 1.7317 -3.9872 -2.7986 10 6 2.2436 -4.5958 -3.9859 11 6 1.7731 -6.0499 -4.0572 12 6 2.3134 -6.6919 -5.3090 13 8 3.0069 -6.0498 -6.0691 14 7 2.0268 -7.9800 -5.5834 15 6 2.5516 -8.6039 -6.8006 16 6 2.0813 -10.0580 -6.8718 17 1 2.1647 -10.5771 -5.9170 18 6 0.7125 -10.2302 -7.5512 19 6 1.2922 -11.4856 -8.2239 20 1 1.1585 -12.3956 -7.6390 21 8 0.8972 -11.6401 -9.5885 22 6 2.6780 -10.8414 -8.0529 23 6 1.5972 -2.0332 -1.4486 24 1 -0.3933 0.4417 0.7651 25 1 1.7924 -0.5138 0.8901 26 1 1.5615 2.4679 -1.2085 27 1 1.5879 2.4586 1.2243 28 1 2.9865 0.9959 -1.9676 29 1 3.8092 -0.1596 -3.9794 30 1 3.2275 -2.5189 -4.3702 31 1 3.3330 -4.5673 -3.9681 32 1 1.8801 -4.0528 -4.8582 33 1 0.6836 -6.0789 -4.0748 34 1 2.1370 -6.5927 -3.1848 35 1 1.4695 -8.4926 -4.9772 36 1 2.1873 -8.0614 -7.6730 37 1 3.6411 -8.5744 -6.7832 38 1 -0.0976 -10.4431 -6.8536 39 1 0.4695 -9.4317 -8.2524 40 1 0.0264 -12.0448 -9.7025 41 1 2.9725 -10.2101 -8.8913 42 1 3.4549 -11.5479 -7.7604 43 1 0.9757 -2.5578 -0.7380 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12309068_4549614.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:22 Heat of formation + Delta-G solvation = -107.780255 kcal Electronic energy + Delta-G solvation = -23989.028052 eV Core-core repulsion = 20194.797534 eV Total energy + Delta-G solvation = -3794.230517 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.42659 -40.96983 -40.11871 -39.06997 -37.46278 -36.63339 -35.06912 -33.36610 -32.61093 -30.95696 -28.96569 -27.00252 -26.72560 -25.24949 -23.67276 -23.24712 -22.01575 -21.51702 -20.43499 -19.21045 -18.58638 -18.54635 -17.82632 -17.53558 -17.35337 -17.12526 -16.85291 -16.50560 -16.15452 -15.83651 -15.66786 -15.22562 -15.08138 -14.59151 -14.52668 -14.37724 -14.14006 -13.93376 -13.55813 -13.45751 -13.43563 -12.96570 -12.92840 -12.65132 -12.44740 -12.35925 -12.02935 -11.87580 -11.82631 -11.69664 -11.31064 -11.12535 -10.71619 -10.57511 -10.18502 -9.90981 -9.28633 -4.91303 0.18246 0.37788 1.28227 1.49210 1.60910 1.69102 1.95786 2.46212 2.61543 3.28663 3.35725 3.45836 3.54642 3.59119 3.75408 3.80520 3.83478 3.87384 3.95452 4.01364 4.09550 4.20735 4.22958 4.25072 4.33530 4.35175 4.47752 4.60914 4.62762 4.67574 4.74809 4.76868 4.79371 4.83010 4.96599 4.99508 5.12949 5.23431 5.30019 5.36417 5.43980 5.45611 5.67820 6.30826 6.43351 6.58090 6.88028 7.12617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.090 4.090 3 Si 0.771 3.229 4 C -0.048 4.048 5 C -0.159 4.159 6 C -0.075 4.075 7 C -0.212 4.212 8 C 0.116 3.884 9 O -0.323 6.323 10 C 0.073 3.927 11 C -0.131 4.131 12 C 0.517 3.483 13 O -0.587 6.587 14 N -0.712 5.712 15 C 0.132 3.868 16 C -0.109 4.109 17 H 0.124 0.876 18 C -0.161 4.161 19 C 0.071 3.929 20 H 0.102 0.898 21 O -0.586 6.586 22 C -0.130 4.130 23 C -0.141 4.141 24 H 0.396 0.604 25 H 0.098 0.902 26 H -0.299 1.299 27 H -0.283 1.283 28 H 0.147 0.853 29 H 0.155 0.845 30 H 0.138 0.862 31 H 0.067 0.933 32 H 0.062 0.938 33 H 0.125 0.875 34 H 0.129 0.871 35 H 0.420 0.580 36 H 0.053 0.947 37 H 0.061 0.939 38 H 0.088 0.912 39 H 0.075 0.925 40 H 0.394 0.606 41 H 0.076 0.924 42 H 0.086 0.914 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.131 -4.258 4.206 5.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.198 4.198 3 Si 0.676 3.324 4 C -0.048 4.048 5 C -0.177 4.177 6 C -0.093 4.093 7 C -0.231 4.231 8 C 0.071 3.929 9 O -0.237 6.237 10 C -0.002 4.002 11 C -0.171 4.171 12 C 0.304 3.696 13 O -0.467 6.467 14 N -0.365 5.365 15 C 0.008 3.992 16 C -0.127 4.127 17 H 0.142 0.858 18 C -0.199 4.199 19 C 0.012 3.988 20 H 0.120 0.880 21 O -0.394 6.394 22 C -0.168 4.168 23 C -0.160 4.160 24 H 0.246 0.754 25 H 0.116 0.884 26 H -0.227 1.227 27 H -0.210 1.210 28 H 0.164 0.836 29 H 0.172 0.828 30 H 0.156 0.844 31 H 0.086 0.914 32 H 0.080 0.920 33 H 0.143 0.857 34 H 0.147 0.853 35 H 0.257 0.743 36 H 0.071 0.929 37 H 0.080 0.920 38 H 0.107 0.893 39 H 0.093 0.907 40 H 0.244 0.756 41 H 0.094 0.906 42 H 0.105 0.895 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.699 -3.190 3.129 4.523 hybrid contribution -1.855 -0.566 0.362 1.973 sum -1.156 -3.756 3.491 5.257 Atomic orbital electron populations 1.86551 1.18441 1.80804 1.51082 1.25108 0.84178 1.12238 0.98240 0.94004 0.90353 0.71574 0.76448 1.19310 0.96759 0.92949 0.95773 1.21131 1.00840 1.00645 0.95041 1.21234 0.97737 0.93432 0.96882 1.21553 1.03155 0.97069 1.01293 1.19125 0.95242 0.83588 0.94935 1.85942 1.71422 1.22709 1.43652 1.22445 0.99076 0.93252 0.85458 1.21428 1.04851 0.93890 0.96916 1.20665 0.79609 0.82164 0.87115 1.90742 1.40359 1.63854 1.51782 1.45833 1.53347 1.11667 1.25639 1.21290 0.98668 0.92495 0.86727 1.22523 0.96775 0.93743 0.99667 0.85800 1.23735 0.97263 0.98918 0.99972 1.23488 0.95746 0.97048 0.82513 0.87995 1.86499 1.41290 1.85255 1.26385 1.23106 0.96722 0.99264 0.97733 1.20319 1.03506 0.94739 0.97444 0.75365 0.88447 1.22716 1.21040 0.83629 0.82762 0.84433 0.91445 0.91973 0.85651 0.85261 0.74278 0.92854 0.92032 0.89324 0.90678 0.75565 0.90551 0.89548 0.85293 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.12 12.74 -148.98 -1.90 -4.02 16 2 C -0.09 -0.09 2.81 71.23 0.20 0.11 16 3 Si 0.77 -0.99 29.79 68.60 2.04 1.05 16 4 C -0.05 -0.24 5.42 -19.88 -0.11 -0.34 16 5 C -0.16 -0.45 8.67 22.28 0.19 -0.25 16 6 C -0.08 -0.19 10.04 22.25 0.22 0.03 16 7 C -0.21 -1.09 9.04 22.37 0.20 -0.88 16 8 C 0.12 0.85 6.69 22.51 0.15 1.00 16 9 O -0.32 -1.93 10.14 -92.39 -0.94 -2.87 16 10 C 0.07 0.20 4.03 71.98 0.29 0.49 16 11 C -0.13 0.41 6.07 29.85 0.18 0.59 16 12 C 0.52 0.91 7.83 87.66 0.69 1.60 16 13 O -0.59 -6.70 15.98 -3.04 -0.05 -6.74 16 14 N -0.71 2.66 5.56 -463.05 -2.57 0.09 16 15 C 0.13 -0.18 5.51 86.38 0.48 0.30 16 16 C -0.11 0.65 3.76 -10.27 -0.04 0.61 16 17 H 0.12 -1.26 8.14 -2.39 -0.02 -1.28 16 18 C -0.16 0.82 7.46 31.12 0.23 1.05 16 19 C 0.07 -0.24 5.21 31.12 0.16 -0.08 16 20 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 21 O -0.59 -0.48 13.67 -148.98 -2.04 -2.52 16 22 C -0.13 0.33 7.47 31.12 0.23 0.57 16 23 C -0.14 -1.03 9.55 22.37 0.21 -0.81 16 24 H 0.40 -1.88 8.74 -74.06 -0.65 -2.53 16 25 H 0.10 -0.30 7.96 -2.38 -0.02 -0.32 16 26 H -0.30 -1.85 7.11 99.48 0.71 -1.14 16 27 H -0.28 -0.65 7.11 99.48 0.71 0.06 16 28 H 0.15 -0.25 4.87 -2.91 -0.01 -0.26 16 29 H 0.15 -0.43 8.06 -2.91 -0.02 -0.45 16 30 H 0.14 0.46 6.30 -2.91 -0.02 0.44 16 31 H 0.07 0.24 7.61 -2.39 -0.02 0.22 16 32 H 0.06 0.28 7.63 -2.39 -0.02 0.26 16 33 H 0.13 -0.83 8.14 -2.38 -0.02 -0.84 16 34 H 0.13 -0.94 8.14 -2.39 -0.02 -0.96 16 35 H 0.42 -4.40 8.47 -92.71 -0.79 -5.19 16 36 H 0.05 0.15 7.84 -2.39 -0.02 0.13 16 37 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 38 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 39 H 0.07 -0.09 7.90 -2.38 -0.02 -0.11 16 40 H 0.39 -2.90 9.12 -74.06 -0.68 -3.58 16 41 H 0.08 0.09 8.10 -2.39 -0.02 0.07 16 42 H 0.09 -0.36 8.14 -2.38 -0.02 -0.38 16 43 H 0.13 0.88 8.06 -2.91 -0.02 0.85 16 Total: 0.00 -24.34 359.30 -3.17 -27.51 By element: Atomic # 1 Polarization: -15.44 SS G_CDS: -1.02 Total: -16.46 kcal Atomic # 6 Polarization: 0.67 SS G_CDS: 3.30 Total: 3.96 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -2.57 Total: 0.09 kcal Atomic # 8 Polarization: -11.23 SS G_CDS: -4.92 Total: -16.15 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: 2.04 Total: 1.05 kcal Total: -24.34 -3.17 -27.51 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_4549614.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.270 kcal (2) G-P(sol) polarization free energy of solvation -24.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.174 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds