Wall clock time and date at job start Sat Mar 6 2021 20:38:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35992 * 116.99799 * 2 1 4 4 C 1.39157 * 120.07619 * 179.97438 * 3 2 1 5 5 O 1.35995 * 120.06722 * 359.97438 * 4 3 2 6 6 C 1.42906 * 117.00010 * 179.72778 * 5 4 3 7 7 C 1.50694 * 109.47292 * 179.97438 * 6 5 4 8 8 O 1.21278 * 120.00385 * 0.02562 * 7 6 5 9 9 N 1.34782 * 119.99926 * 179.97438 * 7 6 5 10 10 C 1.46500 * 120.00085 * 179.97438 * 9 7 6 11 11 C 1.52998 * 109.47293 * 180.02562 * 10 9 7 12 12 H 1.09002 * 112.84975 * 43.80078 * 11 10 9 13 13 C 1.53777 * 113.61503 * 174.99786 * 11 10 9 14 14 C 1.53784 * 87.08025 * 139.98214 * 13 11 10 15 15 H 1.08994 * 113.61390 * 89.19905 * 14 13 11 16 16 O 1.42904 * 113.61261 * 220.02103 * 14 13 11 17 17 C 1.53783 * 87.08237 * 334.56838 * 14 13 11 18 18 C 1.38564 * 119.85928 * 179.72450 * 4 3 2 19 19 C 1.38242 * 119.99394 * 0.27154 * 18 4 3 20 20 N 1.48003 * 119.92391 * 180.02562 * 19 18 4 21 21 O 1.21808 * 120.00130 * 0.02562 * 20 19 18 22 22 O 1.21803 * 120.00433 * 179.97438 * 20 19 18 23 23 C 1.38247 * 120.15106 * 0.02562 * 19 18 4 24 24 C 1.50702 * 119.93106 * 179.97438 * 23 19 18 25 25 O 1.42899 * 109.47255 * 74.99281 * 24 23 19 26 26 Si 1.86299 * 109.47417 * 195.00146 * 24 23 19 27 27 C 1.38242 * 120.14549 * 359.97276 * 23 19 18 28 28 H 1.08999 * 109.47488 * 300.00325 * 1 2 3 29 29 H 1.09001 * 109.46939 * 60.00933 * 1 2 3 30 30 H 1.08999 * 109.46868 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.46864 * 300.00327 * 6 5 4 32 32 H 1.08999 * 109.46969 * 59.99708 * 6 5 4 33 33 H 0.96995 * 119.99933 * 0.02562 * 9 7 6 34 34 H 1.09004 * 109.46798 * 299.99959 * 10 9 7 35 35 H 1.08999 * 109.47172 * 60.00039 * 10 9 7 36 36 H 1.08994 * 113.61741 * 254.52948 * 13 11 10 37 37 H 1.08996 * 113.61286 * 25.43575 * 13 11 10 38 38 H 0.96705 * 113.99570 * 179.97438 * 16 14 13 39 39 H 1.09001 * 113.61577 * 270.88481 * 17 14 13 40 40 H 1.08995 * 113.61904 * 139.97582 * 17 14 13 41 41 H 1.07995 * 120.00066 * 180.25369 * 18 4 3 42 42 H 1.09006 * 109.46488 * 314.99672 * 24 23 19 43 43 H 0.96702 * 113.99228 * 60.00764 * 25 24 23 44 44 H 1.48496 * 110.00007 * 58.67332 * 26 24 23 45 45 H 1.48499 * 110.00219 * 179.97438 * 26 24 23 46 46 H 1.08004 * 120.00330 * 180.02562 * 27 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4359 1.2864 0.0005 5 8 4.1795 0.1478 0.0016 6 6 5.6003 0.3007 -0.0040 7 6 6.2519 -1.0580 -0.0012 8 8 5.5671 -2.0590 0.0044 9 7 7.5957 -1.1610 -0.0061 10 6 8.2292 -2.4820 -0.0029 11 6 9.7504 -2.3182 -0.0089 12 1 10.0960 -1.5491 0.6819 13 6 10.5136 -3.6472 0.1167 14 6 11.5015 -3.0873 -0.9203 15 1 12.3276 -2.5294 -0.4795 16 8 11.9341 -4.0545 -1.8792 17 6 10.3513 -2.1969 -1.4193 18 6 4.0602 2.5234 -0.0052 19 6 3.3028 3.6799 -0.0059 20 7 3.9713 5.0003 -0.0126 21 8 5.1875 5.0672 -0.0181 22 8 3.3053 6.0202 -0.0136 23 6 1.9223 3.6058 -0.0002 24 6 1.1014 4.8696 -0.0003 25 8 1.1293 5.4556 -1.3033 26 14 -0.6578 4.4676 0.4624 27 6 1.2932 2.3748 0.0056 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5137 -0.8901 30 1 -0.3633 -1.0277 0.0005 31 1 5.9033 0.8477 -0.8968 32 1 5.9097 0.8534 0.8831 33 1 8.1434 -0.3605 -0.0110 34 1 7.9265 -3.0279 0.8907 35 1 7.9195 -3.0356 -0.8892 36 1 10.9560 -3.8055 1.1002 37 1 9.9498 -4.5097 -0.2386 38 1 12.5554 -3.7081 -2.5344 39 1 9.7431 -2.6629 -2.1946 40 1 10.6625 -1.1843 -1.6757 41 1 5.1385 2.5841 -0.0090 42 1 1.5159 5.5720 0.7230 43 1 0.7746 4.8850 -1.9987 44 1 -0.6972 3.8284 1.8022 45 1 -1.4776 5.7058 0.4665 46 1 0.2145 2.3196 0.0096 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_4549636.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:41 Heat of formation + Delta-G solvation = -116.651179 kcal Electronic energy + Delta-G solvation = -33453.351441 eV Core-core repulsion = 28509.037624 eV Total energy + Delta-G solvation = -4944.313817 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.144 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.24707 -42.12531 -41.18854 -40.41918 -39.58500 -39.20298 -37.57740 -37.08963 -36.66122 -35.14573 -32.72677 -32.61541 -30.72518 -29.10517 -28.20820 -27.85724 -26.89571 -25.79061 -24.06498 -23.44443 -23.13665 -21.93289 -20.74956 -20.64803 -19.71565 -19.57979 -18.92508 -18.64353 -18.47992 -18.23037 -17.86199 -17.62937 -17.47218 -17.06583 -16.94852 -16.54154 -16.46125 -16.14541 -15.98315 -15.78055 -15.31002 -15.08093 -14.92817 -14.67978 -14.41247 -14.09932 -13.95222 -13.61312 -13.59416 -13.50397 -13.15364 -12.79098 -12.72454 -12.63656 -12.58532 -12.52419 -12.29045 -12.21028 -12.03846 -11.95438 -11.68201 -11.49034 -11.07597 -10.85292 -10.59241 -10.54071 -10.27386 -9.54461 -5.28172 -1.23665 -0.52154 0.30839 0.42181 1.02177 1.12986 1.37914 1.43572 1.70614 1.81985 1.85535 2.22344 2.89487 3.05596 3.09014 3.18627 3.27025 3.33816 3.37566 3.44547 3.49142 3.61201 3.64226 3.67985 3.77562 3.79233 3.84576 3.93826 3.96528 4.01437 4.15218 4.16189 4.23886 4.37780 4.51296 4.53318 4.58003 4.64985 4.65792 4.70234 4.82220 4.95404 5.13066 5.26202 5.42741 5.46475 5.91035 6.21604 6.43146 6.60181 6.77169 6.97825 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.171 3.829 4 C 0.109 3.891 5 O -0.264 6.264 6 C 0.032 3.968 7 C 0.517 3.483 8 O -0.508 6.508 9 N -0.725 5.725 10 C 0.133 3.867 11 C -0.125 4.125 12 H 0.102 0.898 13 C -0.120 4.120 14 C 0.075 3.925 15 H 0.084 0.916 16 O -0.560 6.560 17 C -0.166 4.166 18 C -0.118 4.118 19 C -0.025 4.025 20 N 0.032 4.968 21 O -0.174 6.174 22 O -0.129 6.129 23 C -0.043 4.043 24 C -0.074 4.074 25 O -0.515 6.515 26 Si 0.675 3.325 27 C -0.177 4.177 28 H 0.064 0.936 29 H 0.068 0.932 30 H 0.114 0.886 31 H 0.100 0.900 32 H 0.100 0.900 33 H 0.403 0.597 34 H 0.074 0.926 35 H 0.075 0.925 36 H 0.079 0.921 37 H 0.095 0.905 38 H 0.380 0.620 39 H 0.093 0.907 40 H 0.072 0.928 41 H 0.166 0.834 42 H 0.139 0.861 43 H 0.374 0.626 44 H -0.252 1.252 45 H -0.242 1.242 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.072 -2.014 -1.079 2.286 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.047 4.047 7 C 0.301 3.699 8 O -0.382 6.382 9 N -0.379 5.379 10 C 0.010 3.990 11 C -0.144 4.144 12 H 0.120 0.880 13 C -0.158 4.158 14 C 0.016 3.984 15 H 0.101 0.899 16 O -0.365 6.365 17 C -0.204 4.204 18 C -0.138 4.138 19 C -0.109 4.109 20 N 0.551 4.449 21 O -0.385 6.385 22 O -0.350 6.350 23 C -0.045 4.045 24 C -0.184 4.184 25 O -0.319 6.319 26 Si 0.575 3.425 27 C -0.196 4.196 28 H 0.083 0.917 29 H 0.086 0.914 30 H 0.132 0.868 31 H 0.118 0.882 32 H 0.117 0.883 33 H 0.238 0.762 34 H 0.093 0.907 35 H 0.093 0.907 36 H 0.098 0.902 37 H 0.114 0.886 38 H 0.228 0.772 39 H 0.111 0.889 40 H 0.090 0.910 41 H 0.184 0.816 42 H 0.156 0.844 43 H 0.220 0.780 44 H -0.176 1.176 45 H -0.166 1.166 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.644 -3.595 0.185 3.958 hybrid contribution 1.491 1.624 -0.087 2.206 sum -0.154 -1.971 0.098 1.979 Atomic orbital electron populations 1.23420 0.76793 1.05790 1.02171 1.86347 1.22497 1.24208 1.86481 1.18451 0.89042 0.85905 0.94379 1.17857 0.88431 0.85335 1.02180 1.86339 1.16868 1.26018 1.88400 1.22659 0.80202 0.97247 1.04589 1.19832 0.82598 0.90159 0.77345 1.90814 1.62623 1.37843 1.46907 1.45789 1.05739 1.10136 1.76282 1.21396 0.90694 0.83721 1.03145 1.22590 0.93605 0.99596 0.98572 0.88028 1.23050 0.96527 0.97148 0.99046 1.23311 0.94433 0.90169 0.90468 0.89854 1.86545 1.66748 1.38789 1.44430 1.23816 0.98814 1.00911 0.96815 1.20801 1.02195 0.88971 1.01839 1.20395 0.91979 0.83127 1.15415 1.43386 1.00985 1.02625 0.97915 1.94541 0.95801 1.93725 1.54397 1.94577 1.64449 1.24070 1.51857 1.20097 0.91600 0.97056 0.95746 1.25468 1.08465 0.93283 0.91193 1.86713 1.86511 1.43421 1.15239 0.95569 0.76374 0.85249 0.85358 1.20902 1.00507 0.89591 1.08557 0.91739 0.91353 0.86768 0.88206 0.88268 0.76214 0.90734 0.90704 0.90225 0.88605 0.77229 0.88865 0.90958 0.81642 0.84419 0.77974 1.17647 1.16594 0.82012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.06 10.28 -34.22 -0.35 -0.41 16 3 C 0.17 -0.02 6.70 -39.12 -0.26 -0.28 16 4 C 0.11 0.06 6.70 -39.12 -0.26 -0.21 16 5 O -0.26 -0.45 9.46 -47.35 -0.45 -0.90 16 6 C 0.03 -0.06 5.22 36.00 0.19 0.13 16 7 C 0.52 0.37 7.91 -10.99 -0.09 0.28 16 8 O -0.51 -2.97 16.50 -14.35 -0.24 -3.20 16 9 N -0.73 1.68 5.56 -60.30 -0.33 1.34 16 10 C 0.13 -0.20 5.51 -4.04 -0.02 -0.22 16 11 C -0.12 0.40 3.75 -89.81 -0.34 0.06 16 12 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 13 C -0.12 0.22 7.47 -25.92 -0.19 0.03 16 14 C 0.08 -0.14 5.21 -25.92 -0.14 -0.28 16 15 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 16 O -0.56 0.03 13.67 -35.23 -0.48 -0.45 16 17 C -0.17 0.46 7.46 -25.92 -0.19 0.27 16 18 C -0.12 0.01 8.54 -39.46 -0.34 -0.33 16 19 C -0.03 -0.04 6.85 -79.95 -0.55 -0.59 16 20 N 0.03 0.13 4.45 33.96 0.15 0.28 16 21 O -0.17 -0.83 18.44 -29.46 -0.54 -1.38 16 22 O -0.13 -0.70 14.62 -35.97 -0.53 -1.22 16 23 C -0.04 0.01 5.26 -104.62 -0.55 -0.54 16 24 C -0.07 0.01 1.74 36.01 0.06 0.07 16 25 O -0.52 -0.17 11.79 -55.49 -0.65 -0.82 16 26 Si 0.67 -1.48 29.91 -169.99 -5.08 -6.57 16 27 C -0.18 0.35 7.65 -39.46 -0.30 0.04 16 28 H 0.06 -0.34 7.65 -51.93 -0.40 -0.74 16 29 H 0.07 -0.43 7.68 -51.93 -0.40 -0.82 16 30 H 0.11 -0.58 8.14 -51.93 -0.42 -1.00 16 31 H 0.10 -0.43 7.66 -51.93 -0.40 -0.83 16 32 H 0.10 -0.43 7.66 -51.93 -0.40 -0.83 16 33 H 0.40 -2.19 8.47 -40.82 -0.35 -2.54 16 34 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.07 -0.01 7.84 -51.93 -0.41 -0.42 16 36 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 37 H 0.10 -0.07 8.10 -51.93 -0.42 -0.49 16 38 H 0.38 -1.52 9.12 45.56 0.42 -1.11 16 39 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 40 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 41 H 0.17 -0.35 5.85 -52.49 -0.31 -0.66 16 42 H 0.14 0.22 6.07 -51.93 -0.32 -0.10 16 43 H 0.37 -1.58 8.70 45.56 0.40 -1.18 16 44 H -0.25 0.05 7.11 56.52 0.40 0.45 16 45 H -0.24 -0.28 7.11 56.52 0.40 0.12 16 46 H 0.16 -0.81 3.36 -52.48 -0.18 -0.99 16 LS Contribution 389.60 15.07 5.87 5.87 Total: 0.00 -13.57 389.60 -9.52 -23.09 By element: Atomic # 1 Polarization: -10.11 SS G_CDS: -4.90 Total: -15.01 kcal Atomic # 6 Polarization: 1.37 SS G_CDS: -1.99 Total: -0.62 kcal Atomic # 7 Polarization: 1.81 SS G_CDS: -0.18 Total: 1.63 kcal Atomic # 8 Polarization: -5.15 SS G_CDS: -3.24 Total: -8.39 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.08 Total: -6.57 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -13.57 -9.52 -23.09 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_4549636.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.563 kcal (2) G-P(sol) polarization free energy of solvation -13.567 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.088 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.651 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds