Wall clock time and date at job start Sat Mar 6 2021 20:38:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35974 * 117.00016 * 2 1 4 4 C 1.38674 * 119.99972 * 180.02562 * 3 2 1 5 5 C 1.38163 * 120.00081 * 180.02562 * 4 3 2 6 6 C 1.50699 * 119.99929 * 180.02562 * 5 4 3 7 7 O 1.42899 * 109.46670 * 254.97520 * 6 5 4 8 8 Si 1.86297 * 109.47387 * 14.97083 * 6 5 4 9 9 C 1.38671 * 119.99595 * 359.97438 * 5 4 3 10 10 O 1.35988 * 119.99906 * 180.02562 * 9 5 4 11 11 C 1.42900 * 117.00385 * 179.97438 * 10 9 5 12 12 C 1.50698 * 109.47305 * 179.97438 * 11 10 9 13 13 O 1.21280 * 119.99790 * 359.97438 * 12 11 10 14 14 N 1.34773 * 119.99980 * 180.02562 * 12 11 10 15 15 C 1.46503 * 120.00036 * 179.97438 * 14 12 11 16 16 C 1.52992 * 109.47166 * 180.02562 * 15 14 12 17 17 H 1.09004 * 112.90752 * 316.24725 * 16 15 14 18 18 C 1.53784 * 113.61673 * 87.50094 * 16 15 14 19 19 C 1.53778 * 87.08081 * 139.98135 * 18 16 15 20 20 H 1.09004 * 113.61886 * 89.12045 * 19 18 16 21 21 O 1.42902 * 113.69068 * 220.00639 * 19 18 16 22 22 C 1.53778 * 87.08449 * 334.56700 * 19 18 16 23 23 C 1.38715 * 120.00491 * 0.27598 * 9 5 4 24 24 C 1.38115 * 119.99939 * 359.45035 * 23 9 5 25 25 H 1.09002 * 109.46957 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.46637 * 299.99823 * 1 2 3 27 27 H 1.08995 * 109.46957 * 60.00000 * 1 2 3 28 28 H 1.07995 * 119.99958 * 0.04468 * 4 3 2 29 29 H 1.08994 * 109.47346 * 134.97354 * 6 5 4 30 30 H 0.96701 * 114.00132 * 299.99914 * 7 6 5 31 31 H 1.48499 * 109.99738 * 60.00094 * 8 6 5 32 32 H 1.48500 * 110.00069 * 181.32069 * 8 6 5 33 33 H 1.08998 * 109.46590 * 59.99543 * 11 10 9 34 34 H 1.08995 * 109.46858 * 300.00022 * 11 10 9 35 35 H 0.97004 * 119.99934 * 359.97438 * 14 12 11 36 36 H 1.08996 * 109.47072 * 59.99516 * 15 14 12 37 37 H 1.09007 * 109.46579 * 299.99681 * 15 14 12 38 38 H 1.08993 * 113.61313 * 254.52732 * 18 16 15 39 39 H 1.09000 * 113.61578 * 25.43464 * 18 16 15 40 40 H 0.96695 * 114.00663 * 277.53767 * 21 19 18 41 41 H 1.08998 * 113.61879 * 270.88747 * 22 19 18 42 42 H 1.08997 * 113.69304 * 139.98833 * 22 19 18 43 43 H 1.08005 * 120.00396 * 179.70336 * 23 9 5 44 44 H 1.07997 * 120.00433 * 180.24874 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2115 0.0000 4 6 3.4312 1.2841 -0.0005 5 6 4.0585 2.5151 0.0000 6 6 5.5634 2.5939 -0.0012 7 8 6.0218 2.9665 1.3000 8 14 6.2720 0.9324 -0.4569 9 6 3.3032 3.6781 0.0005 10 8 3.9205 4.8898 0.0005 11 6 3.0806 6.0459 0.0005 12 6 3.9348 7.2874 0.0012 13 8 5.1438 7.1916 0.0021 14 7 3.3552 8.5041 0.0018 15 6 4.1856 9.7111 0.0030 16 6 3.2863 10.9488 0.0042 17 1 2.4502 10.8664 -0.6903 18 6 2.8745 11.4098 1.4123 19 6 3.0769 12.8505 0.9143 20 1 2.1835 13.2882 0.4687 21 8 3.6948 13.7088 1.8754 22 6 4.0599 12.2724 -0.1173 23 6 1.9180 3.6055 0.0063 24 6 1.2909 2.3750 0.0001 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3632 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 4.0194 0.3784 -0.0017 29 1 5.8877 3.3389 -0.7278 30 1 5.6914 3.8234 1.6030 31 1 5.8027 0.5334 -1.8081 32 1 7.7557 0.9884 -0.4305 33 1 2.4514 6.0377 0.8905 34 1 2.4514 6.0378 -0.8894 35 1 2.3882 8.5807 0.0015 36 1 4.8153 9.7197 -0.8867 37 1 4.8145 9.7185 0.8933 38 1 1.8399 11.1758 1.6631 39 1 3.5772 11.1144 2.1914 40 1 3.0816 14.0756 2.5270 41 1 5.0866 12.2127 0.2436 42 1 3.9834 12.7340 -1.1018 43 1 1.3297 4.5113 0.0116 44 1 0.2124 2.3184 0.0005 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12309068_4974302.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:56 Heat of formation + Delta-G solvation = -136.957466 kcal Electronic energy + Delta-G solvation = -27032.299499 eV Core-core repulsion = 22918.121571 eV Total energy + Delta-G solvation = -4114.177928 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.84425 -41.05765 -40.28936 -39.70998 -38.14833 -36.96240 -36.61395 -35.12560 -32.83051 -31.29677 -30.17026 -28.22060 -27.74101 -26.72725 -26.60254 -23.96860 -23.16741 -22.42237 -21.82890 -20.48399 -19.54663 -18.86748 -18.81516 -18.23237 -17.98960 -17.55385 -17.39535 -16.99517 -16.63417 -16.40814 -16.12325 -15.90218 -15.67901 -15.45109 -15.38800 -14.92571 -14.78394 -14.44103 -14.19370 -14.09503 -13.65741 -13.53768 -13.46375 -13.38859 -13.05520 -12.68443 -12.52297 -12.45573 -12.30993 -12.03753 -11.88754 -11.45498 -11.33388 -11.30857 -11.25470 -11.05879 -10.71965 -10.25470 -10.10529 -8.83103 -4.94570 0.05663 0.32533 1.32411 1.39683 1.42820 1.57087 1.90639 2.34464 2.53263 2.55773 3.27526 3.38656 3.50341 3.54186 3.61802 3.73548 3.79833 3.84311 3.93549 3.98206 4.04828 4.08573 4.12156 4.18731 4.20355 4.27075 4.32218 4.44973 4.45335 4.60898 4.69728 4.75116 4.79018 4.79750 4.81604 4.96497 4.98562 5.10764 5.11663 5.20015 5.24348 5.40871 5.43700 6.11525 6.38823 6.45156 6.49844 6.88599 7.07737 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.119 4.119 5 C -0.119 4.119 6 C -0.083 4.083 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.089 3.911 10 O -0.318 6.318 11 C 0.039 3.961 12 C 0.510 3.490 13 O -0.575 6.575 14 N -0.706 5.706 15 C 0.134 3.866 16 C -0.107 4.107 17 H 0.127 0.873 18 C -0.160 4.160 19 C 0.071 3.929 20 H 0.103 0.897 21 O -0.587 6.587 22 C -0.132 4.132 23 C -0.159 4.159 24 C -0.161 4.161 25 H 0.114 0.886 26 H 0.068 0.932 27 H 0.066 0.934 28 H 0.152 0.848 29 H 0.061 0.939 30 H 0.371 0.629 31 H -0.263 1.263 32 H -0.295 1.295 33 H 0.127 0.873 34 H 0.124 0.876 35 H 0.422 0.578 36 H 0.059 0.941 37 H 0.053 0.947 38 H 0.092 0.908 39 H 0.074 0.926 40 H 0.395 0.605 41 H 0.074 0.926 42 H 0.085 0.915 43 H 0.168 0.832 44 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.101 2.290 0.120 13.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.137 4.137 5 C -0.120 4.120 6 C -0.190 4.190 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.044 3.956 10 O -0.232 6.232 11 C -0.039 4.039 12 C 0.296 3.704 13 O -0.453 6.453 14 N -0.360 5.360 15 C 0.010 3.990 16 C -0.125 4.125 17 H 0.145 0.855 18 C -0.197 4.197 19 C 0.012 3.988 20 H 0.121 0.879 21 O -0.395 6.395 22 C -0.170 4.170 23 C -0.177 4.177 24 C -0.180 4.180 25 H 0.132 0.868 26 H 0.086 0.914 27 H 0.085 0.915 28 H 0.169 0.831 29 H 0.078 0.922 30 H 0.220 0.780 31 H -0.189 1.189 32 H -0.222 1.222 33 H 0.145 0.855 34 H 0.142 0.858 35 H 0.260 0.740 36 H 0.077 0.923 37 H 0.072 0.928 38 H 0.110 0.890 39 H 0.093 0.907 40 H 0.245 0.755 41 H 0.093 0.907 42 H 0.104 0.896 43 H 0.186 0.814 44 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -10.652 0.944 -0.815 10.725 hybrid contribution -1.088 2.208 -0.018 2.462 sum -11.740 3.152 -0.833 12.184 Atomic orbital electron populations 1.23359 0.76358 1.05621 1.02381 1.86088 1.23414 1.26302 1.88920 1.18976 0.91916 0.85386 0.99156 1.20181 0.92465 0.96748 1.04261 1.19454 0.95973 0.91052 1.05551 1.25531 0.92926 1.12546 0.87972 1.86659 1.74201 1.42231 1.32042 0.92223 0.76206 0.78978 0.81271 1.18806 0.91788 0.84195 1.00820 1.86087 1.35628 1.11988 1.89469 1.22709 0.92528 0.81721 1.06904 1.20596 0.88322 0.85604 0.75898 1.90778 1.16907 1.87462 1.50197 1.45642 1.11587 1.04105 1.74713 1.21292 0.93385 0.82876 1.01446 1.22523 0.99206 0.91798 0.98997 0.85497 1.23727 1.03043 0.96600 0.96361 1.23485 0.96375 0.88784 0.90108 0.87888 1.86503 1.40836 1.66684 1.45489 1.23115 0.99186 0.95117 0.99614 1.21378 0.91981 1.00074 1.04291 1.21430 1.01620 0.90894 1.04019 0.86755 0.91384 0.91517 0.83068 0.92156 0.78029 1.18901 1.22227 0.85526 0.85809 0.73984 0.92304 0.92845 0.88989 0.90734 0.75527 0.90746 0.89612 0.81426 0.82036 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.67 10.50 -93.26 -0.98 -1.64 16 3 C 0.09 0.23 6.69 22.49 0.15 0.38 16 4 C -0.12 -0.54 8.59 22.36 0.19 -0.34 16 5 C -0.12 -0.75 5.28 -19.78 -0.10 -0.85 16 6 C -0.08 -0.72 2.33 71.24 0.17 -0.55 16 7 O -0.55 -5.76 12.65 -148.98 -1.89 -7.65 16 8 Si 0.81 4.65 30.17 68.60 2.07 6.72 16 9 C 0.09 0.32 6.62 22.49 0.15 0.47 16 10 O -0.32 -1.55 8.56 -74.38 -0.64 -2.18 16 11 C 0.04 -0.17 5.22 71.24 0.37 0.21 16 12 C 0.51 1.13 7.91 87.66 0.69 1.82 16 13 O -0.57 -8.36 16.50 16.01 0.26 -8.10 16 14 N -0.71 3.51 5.56 -463.07 -2.57 0.94 16 15 C 0.13 -0.23 5.51 86.38 0.48 0.24 16 16 C -0.11 0.75 3.75 -10.27 -0.04 0.71 16 17 H 0.13 -1.49 8.14 -2.39 -0.02 -1.51 16 18 C -0.16 1.01 7.47 31.12 0.23 1.25 16 19 C 0.07 -0.30 5.21 31.12 0.16 -0.14 16 20 H 0.10 -0.86 8.14 -2.38 -0.02 -0.88 16 21 O -0.59 -0.17 13.67 -148.98 -2.04 -2.21 16 22 C -0.13 0.39 7.47 31.12 0.23 0.63 16 23 C -0.16 0.41 9.03 22.35 0.20 0.62 16 24 C -0.16 0.34 9.03 22.36 0.20 0.55 16 25 H 0.11 -0.99 8.14 -2.39 -0.02 -1.01 16 26 H 0.07 -0.57 7.66 -2.39 -0.02 -0.59 16 27 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 28 H 0.15 0.27 5.13 -2.91 -0.01 0.25 16 29 H 0.06 0.69 7.82 -2.39 -0.02 0.67 16 30 H 0.37 3.04 8.60 -74.06 -0.64 2.40 16 31 H -0.26 -1.98 7.11 99.48 0.71 -1.27 16 32 H -0.29 -3.57 7.11 99.48 0.71 -2.86 16 33 H 0.13 -1.38 7.65 -2.39 -0.02 -1.40 16 34 H 0.12 -1.30 7.67 -2.39 -0.02 -1.32 16 35 H 0.42 -5.58 8.47 -92.70 -0.79 -6.37 16 36 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 37 H 0.05 0.15 7.84 -2.38 -0.02 0.13 16 38 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 39 H 0.07 -0.16 7.89 -2.39 -0.02 -0.18 16 40 H 0.39 -3.16 9.12 -74.06 -0.68 -3.84 16 41 H 0.07 0.09 8.10 -2.39 -0.02 0.07 16 42 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 43 H 0.17 -1.76 6.29 -2.91 -0.02 -1.78 16 44 H 0.16 -1.31 6.29 -2.91 -0.02 -1.32 16 Total: 0.00 -28.24 366.80 -2.58 -30.82 By element: Atomic # 1 Polarization: -21.67 SS G_CDS: -1.00 Total: -22.67 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: 4.20 Total: 5.98 kcal Atomic # 7 Polarization: 3.51 SS G_CDS: -2.57 Total: 0.94 kcal Atomic # 8 Polarization: -16.51 SS G_CDS: -5.27 Total: -21.78 kcal Atomic # 14 Polarization: 4.65 SS G_CDS: 2.07 Total: 6.72 kcal Total: -28.24 -2.58 -30.82 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_4974302.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.136 kcal (2) G-P(sol) polarization free energy of solvation -28.243 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.822 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.957 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds