Wall clock time and date at job start Sat Mar 6 2021 20:38:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35898 * 117.00300 * 2 1 4 4 C 1.38616 * 120.03005 * 180.27464 * 3 2 1 5 5 C 1.38659 * 119.88546 * 180.20618 * 4 3 2 6 6 O 1.35904 * 120.02034 * 179.79449 * 5 4 3 7 7 C 1.42897 * 117.00158 * 359.72284 * 6 5 4 8 8 C 1.50698 * 109.47008 * 180.02562 * 7 6 5 9 9 O 1.21281 * 120.00164 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99720 * 179.97438 * 8 7 6 11 11 C 1.46508 * 120.00013 * 180.02562 * 10 8 7 12 12 C 1.52991 * 109.47429 * 180.02562 * 11 10 8 13 13 H 1.08999 * 112.90686 * 316.25260 * 12 11 10 14 14 C 1.53781 * 113.61611 * 87.50116 * 12 11 10 15 15 C 1.54049 * 87.08031 * 139.97702 * 14 12 11 16 16 H 1.09000 * 113.61076 * 89.06984 * 15 14 12 17 17 O 1.42891 * 113.69771 * 220.05337 * 15 14 12 18 18 C 1.53781 * 113.61529 * 184.99923 * 12 11 10 19 19 C 1.38745 * 119.95226 * 359.51694 * 5 4 3 20 20 C 1.50690 * 119.97615 * 180.27559 * 19 5 4 21 21 O 1.42896 * 109.47492 * 74.99833 * 20 19 5 22 22 Si 1.86308 * 109.47233 * 195.00042 * 20 19 5 23 23 C 1.38204 * 120.05023 * 0.25507 * 19 5 4 24 24 C 1.38158 * 120.10937 * 359.97241 * 23 19 5 25 25 H 1.08995 * 109.47248 * 300.00070 * 1 2 3 26 26 H 1.08999 * 109.46788 * 60.00108 * 1 2 3 27 27 H 1.08997 * 109.47037 * 179.97438 * 1 2 3 28 28 H 1.07994 * 120.05545 * 359.97438 * 4 3 2 29 29 H 1.08993 * 109.47232 * 60.00091 * 7 6 5 30 30 H 1.09005 * 109.46922 * 300.00168 * 7 6 5 31 31 H 0.96996 * 120.00851 * 359.97438 * 10 8 7 32 32 H 1.08997 * 109.46666 * 59.99730 * 11 10 8 33 33 H 1.09002 * 109.46731 * 300.00370 * 11 10 8 34 34 H 1.09005 * 113.61471 * 254.53285 * 14 12 11 35 35 H 1.08996 * 113.61178 * 25.34627 * 14 12 11 36 36 H 0.96702 * 114.00033 * 277.42089 * 17 15 14 37 37 H 1.09002 * 113.61445 * 334.56787 * 18 12 11 38 38 H 1.09002 * 113.61408 * 105.38518 * 18 12 11 39 39 H 1.08999 * 109.47394 * 314.99630 * 20 19 5 40 40 H 0.96707 * 113.99706 * 60.00423 * 21 20 19 41 41 H 1.48498 * 109.99814 * 58.68162 * 22 20 19 42 42 H 1.48506 * 109.99948 * 179.97438 * 22 20 19 43 43 H 1.07998 * 119.94314 * 179.97438 * 23 19 5 44 44 H 1.07998 * 119.96517 * 180.02562 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4302 1.2840 -0.0058 5 6 4.0567 2.5210 -0.0014 6 8 5.4136 2.5960 -0.0028 7 6 6.1316 1.3605 -0.0027 8 6 7.6124 1.6401 -0.0037 9 8 8.0135 2.7847 -0.0049 10 7 8.4912 0.6182 -0.0033 11 6 9.9308 0.8899 -0.0037 12 6 10.6996 -0.4328 -0.0037 13 1 10.2858 -1.1640 0.6908 14 6 10.9556 -0.9966 -1.4113 15 6 12.3575 -1.3940 -0.9114 16 1 12.3962 -2.3874 -0.4646 17 8 13.3930 -1.1752 -1.8715 18 6 12.2227 -0.2601 0.1187 19 6 3.2972 3.6821 -0.0015 20 6 3.9775 5.0268 -0.0030 21 8 4.5024 5.2936 -1.3050 22 14 2.7443 6.3472 0.4519 23 6 1.9172 3.6065 -0.0005 24 6 1.2906 2.3752 -0.0001 25 1 -0.3633 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 4.0197 0.3792 -0.0098 29 1 5.8691 0.7876 -0.8920 30 1 5.8708 0.7888 0.8880 31 1 8.1705 -0.2973 -0.0019 32 1 10.1926 1.4628 0.8859 33 1 10.1923 1.4618 -0.8941 34 1 10.3236 -1.8485 -1.6622 35 1 10.9683 -0.2350 -2.1910 36 1 13.4826 -1.8850 -2.5220 37 1 12.5834 0.7030 -0.2425 38 1 12.6135 -0.5161 1.1035 39 1 4.7906 5.0235 0.7229 40 1 3.8332 5.3116 -2.0028 41 1 2.1676 6.0639 1.7907 42 1 3.4031 7.6781 0.4545 43 1 1.3277 4.5114 -0.0001 44 1 0.2121 2.3188 0.0003 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12309068_4974312.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:59 Heat of formation + Delta-G solvation = -135.837488 kcal Electronic energy + Delta-G solvation = -27081.021747 eV Core-core repulsion = 22966.892384 eV Total energy + Delta-G solvation = -4114.129362 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.85491 -41.06603 -40.28476 -39.72215 -38.31120 -36.94154 -36.62990 -35.13893 -32.30061 -31.58859 -30.31096 -28.41377 -27.93804 -26.72837 -26.11908 -23.94470 -23.15473 -22.49920 -21.84620 -20.49775 -19.94256 -18.90012 -18.33548 -17.95275 -17.85766 -17.61574 -17.20002 -16.86535 -16.71575 -16.51466 -16.37239 -16.03660 -15.77349 -15.59153 -15.14959 -14.96772 -14.83758 -14.49178 -14.45627 -13.89691 -13.67695 -13.46851 -13.42099 -13.32690 -13.17143 -12.69523 -12.49466 -12.46223 -12.27125 -12.01872 -11.89548 -11.87341 -11.63087 -11.32813 -11.12114 -10.72088 -10.36284 -10.27749 -9.70662 -9.10686 -5.04196 0.20252 0.29614 1.31146 1.36358 1.40575 1.64266 1.98329 2.24620 2.53659 2.57404 3.26811 3.38203 3.52755 3.59741 3.61611 3.73266 3.78914 3.83012 3.91399 3.96740 3.99257 4.08019 4.15786 4.18010 4.31145 4.34341 4.39222 4.44059 4.46624 4.59474 4.60869 4.74330 4.78215 4.80108 4.80647 4.97701 5.01754 5.09702 5.22606 5.23330 5.27541 5.42297 5.47585 6.10863 6.34394 6.40419 6.85667 6.88423 7.04982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.164 3.836 4 C -0.254 4.254 5 C 0.172 3.828 6 O -0.307 6.307 7 C 0.037 3.963 8 C 0.510 3.490 9 O -0.573 6.573 10 N -0.706 5.706 11 C 0.133 3.867 12 C -0.107 4.107 13 H 0.127 0.873 14 C -0.161 4.161 15 C 0.072 3.928 16 H 0.104 0.896 17 O -0.586 6.586 18 C -0.131 4.131 19 C -0.203 4.203 20 C -0.070 4.070 21 O -0.558 6.558 22 Si 0.797 3.203 23 C -0.031 4.031 24 C -0.237 4.237 25 H 0.068 0.932 26 H 0.071 0.929 27 H 0.115 0.885 28 H 0.152 0.848 29 H 0.123 0.877 30 H 0.123 0.877 31 H 0.422 0.578 32 H 0.060 0.940 33 H 0.053 0.947 34 H 0.091 0.909 35 H 0.074 0.926 36 H 0.395 0.605 37 H 0.074 0.926 38 H 0.086 0.914 39 H 0.079 0.921 40 H 0.391 0.609 41 H -0.279 1.279 42 H -0.304 1.304 43 H 0.167 0.833 44 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.147 -8.957 -1.053 11.507 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.117 3.883 4 C -0.273 4.273 5 C 0.126 3.874 6 O -0.219 6.219 7 C -0.041 4.041 8 C 0.296 3.704 9 O -0.451 6.451 10 N -0.360 5.360 11 C 0.010 3.990 12 C -0.126 4.126 13 H 0.145 0.855 14 C -0.198 4.198 15 C 0.014 3.986 16 H 0.122 0.878 17 O -0.394 6.394 18 C -0.169 4.169 19 C -0.205 4.205 20 C -0.178 4.178 21 O -0.366 6.366 22 Si 0.701 3.299 23 C -0.048 4.048 24 C -0.255 4.255 25 H 0.087 0.913 26 H 0.090 0.910 27 H 0.134 0.866 28 H 0.170 0.830 29 H 0.140 0.860 30 H 0.141 0.859 31 H 0.260 0.740 32 H 0.078 0.922 33 H 0.071 0.929 34 H 0.109 0.891 35 H 0.092 0.908 36 H 0.245 0.755 37 H 0.093 0.907 38 H 0.105 0.895 39 H 0.097 0.903 40 H 0.240 0.760 41 H -0.206 1.206 42 H -0.233 1.233 43 H 0.184 0.816 44 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -6.216 -7.010 0.169 9.371 hybrid contribution 0.570 -1.176 -0.075 1.309 sum -5.647 -8.186 0.094 9.945 Atomic orbital electron populations 1.23410 0.75930 1.05703 1.02788 1.86053 1.23824 1.26562 1.87932 1.18875 0.91580 0.85103 0.92716 1.20545 0.93555 0.97296 1.15877 1.18640 0.81633 0.93379 0.93739 1.86223 1.15738 1.31733 1.88207 1.22721 0.88259 0.86478 1.06668 1.20535 0.88691 0.85159 0.75982 1.90782 1.80852 1.23436 1.50053 1.45642 1.06041 1.09598 1.74750 1.21312 0.78712 0.97507 1.01471 1.22522 0.94777 0.96226 0.99068 0.85524 1.23780 0.97843 1.01879 0.96332 1.23517 0.86108 0.98904 0.90096 0.87785 1.86500 1.56402 1.50912 1.45609 1.23107 0.94806 0.99318 0.99674 1.19750 0.93882 0.93984 1.12858 1.25158 1.04411 0.99826 0.88420 1.86546 1.39308 1.93737 1.16987 0.94120 0.80289 0.72963 0.82490 1.20867 0.91453 0.98664 0.93858 1.21454 1.01817 0.91131 1.11131 0.91326 0.91034 0.86633 0.82999 0.85982 0.85948 0.74032 0.92209 0.92887 0.89075 0.90775 0.75507 0.90713 0.89519 0.90309 0.76007 1.20606 1.23290 0.81614 0.82053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.13 10.49 -92.40 -0.97 -1.09 16 3 C 0.16 0.24 6.68 22.49 0.15 0.39 16 4 C -0.25 -0.65 8.97 22.46 0.20 -0.45 16 5 C 0.17 1.12 6.66 22.49 0.15 1.27 16 6 O -0.31 -3.08 8.99 -73.43 -0.66 -3.74 16 7 C 0.04 0.04 5.22 71.24 0.37 0.41 16 8 C 0.51 3.31 7.91 87.66 0.69 4.00 16 9 O -0.57 -10.86 16.50 16.00 0.26 -10.59 16 10 N -0.71 1.12 5.56 -463.06 -2.57 -1.45 16 11 C 0.13 0.10 5.51 86.37 0.48 0.58 16 12 C -0.11 0.54 3.76 -10.27 -0.04 0.51 16 13 H 0.13 -1.24 8.14 -2.39 -0.02 -1.25 16 14 C -0.16 0.73 7.48 31.21 0.23 0.96 16 15 C 0.07 -0.22 5.23 31.21 0.16 -0.05 16 16 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 17 O -0.59 -0.77 13.67 -148.98 -2.04 -2.81 16 18 C -0.13 0.21 7.46 31.12 0.23 0.44 16 19 C -0.20 -0.98 5.27 -19.75 -0.10 -1.08 16 20 C -0.07 -0.49 2.37 71.23 0.17 -0.32 16 21 O -0.56 -4.82 12.88 -148.98 -1.92 -6.74 16 22 Si 0.80 0.87 29.91 68.60 2.05 2.92 16 23 C -0.03 0.04 8.65 22.24 0.19 0.23 16 24 C -0.24 0.43 9.04 22.38 0.20 0.64 16 25 H 0.07 -0.60 7.66 -2.39 -0.02 -0.62 16 26 H 0.07 -0.66 7.66 -2.39 -0.02 -0.68 16 27 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 28 H 0.15 -0.28 6.30 -2.91 -0.02 -0.30 16 29 H 0.12 -0.59 7.65 -2.39 -0.02 -0.61 16 30 H 0.12 -0.64 7.67 -2.38 -0.02 -0.65 16 31 H 0.42 -4.12 8.47 -92.71 -0.79 -4.90 16 32 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 33 H 0.05 0.28 7.84 -2.39 -0.02 0.26 16 34 H 0.09 -0.74 8.14 -2.38 -0.02 -0.76 16 35 H 0.07 -0.02 7.89 -2.39 -0.02 -0.04 16 36 H 0.39 -2.79 9.12 -74.06 -0.68 -3.46 16 37 H 0.07 0.19 8.10 -2.39 -0.02 0.17 16 38 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 39 H 0.08 1.02 7.82 -2.39 -0.02 1.00 16 40 H 0.39 -0.60 8.70 -74.05 -0.64 -1.25 16 41 H -0.28 -1.30 7.11 99.48 0.71 -0.59 16 42 H -0.30 -2.83 7.11 99.48 0.71 -2.12 16 43 H 0.17 -1.29 5.12 -2.91 -0.01 -1.30 16 44 H 0.16 -1.23 6.29 -2.91 -0.02 -1.25 16 Total: 0.00 -32.73 367.40 -2.65 -35.38 By element: Atomic # 1 Polarization: -19.37 SS G_CDS: -1.01 Total: -20.38 kcal Atomic # 6 Polarization: 4.31 SS G_CDS: 4.20 Total: 8.52 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -2.57 Total: -1.45 kcal Atomic # 8 Polarization: -19.65 SS G_CDS: -5.32 Total: -24.98 kcal Atomic # 14 Polarization: 0.87 SS G_CDS: 2.05 Total: 2.92 kcal Total: -32.73 -2.65 -35.38 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_4974312.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.462 kcal (2) G-P(sol) polarization free energy of solvation -32.729 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.191 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.646 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.375 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.837 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds