Wall clock time and date at job start Sat Mar 6 2021 20:39:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35993 * 117.00129 * 2 1 4 4 C 1.39149 * 120.07499 * 179.97438 * 3 2 1 5 5 O 1.35994 * 120.07341 * 0.02562 * 4 3 2 6 6 C 1.42904 * 117.00295 * 179.97438 * 5 4 3 7 7 C 1.50696 * 109.47018 * 179.97438 * 6 5 4 8 8 O 1.21284 * 120.00310 * 359.97438 * 7 6 5 9 9 N 1.34780 * 119.99951 * 179.97438 * 7 6 5 10 10 C 1.46496 * 120.00170 * 179.97438 * 9 7 6 11 11 C 1.53005 * 109.47007 * 180.02562 * 10 9 7 12 12 H 1.08995 * 112.84621 * 43.80816 * 11 10 9 13 13 C 1.53777 * 113.61215 * 175.00525 * 11 10 9 14 14 C 1.53776 * 87.08348 * 139.97985 * 13 11 10 15 15 H 1.09004 * 113.61417 * 89.11127 * 14 13 11 16 16 O 1.42900 * 113.61635 * 219.93310 * 14 13 11 17 17 C 1.53780 * 87.08085 * 334.56695 * 14 13 11 18 18 C 1.38569 * 119.85403 * 180.02562 * 4 3 2 19 19 C 1.38239 * 120.00051 * 359.72821 * 18 4 3 20 20 C 1.38256 * 120.14381 * 0.55150 * 19 18 4 21 21 C 1.50693 * 119.92431 * 179.72611 * 20 19 18 22 22 O 1.42907 * 109.47661 * 119.72549 * 21 20 19 23 23 Si 1.86298 * 109.47618 * 359.72239 * 21 20 19 24 24 C 1.38240 * 120.14513 * 359.44463 * 20 19 18 25 25 H 1.09007 * 109.46714 * 299.99241 * 1 2 3 26 26 H 1.09000 * 109.47651 * 59.99518 * 1 2 3 27 27 H 1.08997 * 109.47249 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.46706 * 299.99750 * 6 5 4 29 29 H 1.08996 * 109.47140 * 59.99827 * 6 5 4 30 30 H 0.97003 * 119.99722 * 0.02562 * 9 7 6 31 31 H 1.08997 * 109.47414 * 300.00475 * 10 9 7 32 32 H 1.09006 * 109.46690 * 60.00840 * 10 9 7 33 33 H 1.09006 * 113.61438 * 254.52949 * 13 11 10 34 34 H 1.08996 * 113.61813 * 25.43279 * 13 11 10 35 35 H 0.96707 * 113.99746 * 180.02562 * 16 14 13 36 36 H 1.08996 * 113.61516 * 270.88375 * 17 14 13 37 37 H 1.09000 * 113.61862 * 139.98009 * 17 14 13 38 38 H 1.07999 * 119.99937 * 179.97438 * 18 4 3 39 39 H 1.08001 * 119.92844 * 180.27182 * 19 18 4 40 40 H 1.09000 * 109.46936 * 239.72172 * 21 20 19 41 41 H 0.96697 * 114.00527 * 179.97438 * 22 21 20 42 42 H 1.48506 * 109.99834 * 298.68714 * 23 21 20 43 43 H 1.48502 * 110.00011 * 59.99978 * 23 21 20 44 44 H 1.08011 * 119.99834 * 180.25547 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6004 0.3006 0.0005 7 6 6.2518 -1.0582 0.0012 8 8 5.5669 -2.0592 0.0021 9 7 7.5957 -1.1613 0.0008 10 6 8.2290 -2.4823 0.0020 11 6 9.7503 -2.3184 0.0018 12 1 10.0934 -1.5518 0.6965 13 6 10.5130 -3.6480 0.1257 14 6 11.5046 -3.0847 -0.9059 15 1 12.3284 -2.5271 -0.4604 16 8 11.9421 -4.0492 -1.8653 17 6 10.3562 -2.1926 -1.4060 18 6 4.0603 2.5234 0.0011 19 6 3.3030 3.6798 -0.0046 20 6 1.9224 3.6057 0.0007 21 6 1.1017 4.8696 0.0007 22 8 0.2776 4.9026 -1.1664 23 14 2.2365 6.3471 0.0015 24 6 1.2933 2.3748 0.0001 25 1 -0.3633 0.5138 0.8901 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3633 -1.0276 0.0005 28 1 5.9065 0.8504 -0.8895 29 1 5.9066 0.8504 0.8905 30 1 8.1435 -0.3607 0.0004 31 1 7.9231 -3.0311 0.8926 32 1 7.9225 -3.0329 -0.8875 33 1 10.9519 -3.8095 1.1103 34 1 9.9505 -4.5093 -0.2345 35 1 12.5663 -3.7009 -2.5166 36 1 9.7508 -2.6560 -2.1849 37 1 10.6684 -1.1792 -1.6580 38 1 5.1386 2.5840 0.0019 39 1 3.7908 4.6434 -0.0086 40 1 0.4726 4.8942 0.8905 41 1 -0.2797 5.6901 -1.2323 42 1 3.0767 6.3415 1.2260 43 1 3.0997 6.3252 -1.2067 44 1 0.2146 2.3196 0.0000 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:05 Heat of formation + Delta-G solvation = -124.321173 kcal Electronic energy + Delta-G solvation = -26787.195797 eV Core-core repulsion = 22673.565820 eV Total energy + Delta-G solvation = -4113.629977 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.77500 -41.01200 -40.22751 -39.16185 -38.73808 -37.04847 -36.60001 -35.05771 -32.19063 -31.50671 -30.42860 -28.53663 -27.98643 -26.86508 -26.11513 -23.84722 -23.23548 -22.39336 -21.72397 -20.59333 -19.69808 -18.87500 -18.52412 -18.16890 -18.07454 -17.53983 -17.39472 -16.98105 -16.64138 -16.47222 -16.19101 -15.82139 -15.77811 -15.58080 -15.44841 -14.92316 -14.73103 -14.27714 -14.14246 -14.01088 -13.73810 -13.56458 -13.49398 -13.36148 -12.79370 -12.73998 -12.59823 -12.33738 -12.24864 -12.18249 -12.02113 -11.99396 -11.81366 -11.45729 -10.95248 -10.77933 -10.38536 -10.17078 -9.76865 -8.84303 -5.01064 0.17870 0.27903 1.23692 1.45341 1.53325 1.59784 1.92890 2.32398 2.52474 2.55037 3.11231 3.30148 3.34102 3.41141 3.53426 3.64872 3.68687 3.75142 3.80861 3.82119 3.90660 3.91378 4.06380 4.15697 4.19647 4.23042 4.29663 4.31362 4.43121 4.55627 4.56783 4.61371 4.66500 4.68554 4.75658 4.86081 4.97556 4.99537 5.06583 5.19736 5.33537 5.37156 5.53697 5.96697 6.32954 6.54755 6.58002 6.62152 7.12416 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.300 6.300 3 C 0.109 3.891 4 C 0.104 3.896 5 O -0.276 6.276 6 C 0.038 3.962 7 C 0.515 3.485 8 O -0.508 6.508 9 N -0.727 5.727 10 C 0.133 3.867 11 C -0.124 4.124 12 H 0.101 0.899 13 C -0.120 4.120 14 C 0.075 3.925 15 H 0.083 0.917 16 O -0.559 6.559 17 C -0.166 4.166 18 C -0.168 4.168 19 C -0.121 4.121 20 C -0.070 4.070 21 C -0.070 4.070 22 O -0.546 6.546 23 Si 0.685 3.315 24 C -0.142 4.142 25 H 0.056 0.944 26 H 0.057 0.943 27 H 0.104 0.896 28 H 0.094 0.906 29 H 0.094 0.906 30 H 0.402 0.598 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.079 0.921 34 H 0.096 0.904 35 H 0.380 0.620 36 H 0.093 0.907 37 H 0.071 0.929 38 H 0.139 0.861 39 H 0.123 0.877 40 H 0.075 0.925 41 H 0.383 0.617 42 H -0.255 1.255 43 H -0.250 1.250 44 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.018 7.406 1.124 7.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.213 6.213 3 C 0.063 3.937 4 C 0.058 3.942 5 O -0.188 6.188 6 C -0.041 4.041 7 C 0.299 3.701 8 O -0.382 6.382 9 N -0.382 5.382 10 C 0.010 3.990 11 C -0.143 4.143 12 H 0.119 0.881 13 C -0.158 4.158 14 C 0.016 3.984 15 H 0.101 0.899 16 O -0.365 6.365 17 C -0.203 4.203 18 C -0.186 4.186 19 C -0.139 4.139 20 C -0.071 4.071 21 C -0.180 4.180 22 O -0.352 6.352 23 Si 0.586 3.414 24 C -0.161 4.161 25 H 0.074 0.926 26 H 0.076 0.924 27 H 0.122 0.878 28 H 0.111 0.889 29 H 0.112 0.888 30 H 0.236 0.764 31 H 0.092 0.908 32 H 0.092 0.908 33 H 0.098 0.902 34 H 0.114 0.886 35 H 0.227 0.773 36 H 0.111 0.889 37 H 0.090 0.910 38 H 0.157 0.843 39 H 0.141 0.859 40 H 0.093 0.907 41 H 0.230 0.770 42 H -0.180 1.180 43 H -0.175 1.175 44 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.243 5.559 1.367 6.149 hybrid contribution 0.533 0.635 -0.169 0.846 sum 2.776 6.195 1.199 6.893 Atomic orbital electron populations 1.23143 0.78081 1.04444 1.01397 1.86251 1.21389 1.25190 1.88518 1.18256 0.88966 0.85578 1.00900 1.18235 0.88352 0.85654 1.01928 1.86280 1.16039 1.27605 1.88870 1.22479 0.81310 0.96362 1.03904 1.19999 0.82451 0.90520 0.77138 1.90805 1.62625 1.38004 1.46734 1.45793 1.05849 1.09901 1.76656 1.21375 0.90594 0.83924 1.03091 1.22583 0.93701 0.99520 0.98497 0.88101 1.23050 0.96484 0.97192 0.99044 1.23309 0.94375 0.90217 0.90474 0.89906 1.86548 1.66400 1.38843 1.44690 1.23813 0.98794 1.00822 0.96914 1.20921 1.00357 0.90620 1.06736 1.20530 0.92990 0.97559 1.02814 1.19038 0.92692 0.93526 1.01817 1.24661 0.99669 1.02871 0.90814 1.86495 1.58790 1.47781 1.42150 0.95334 0.81109 0.84238 0.80680 1.20913 1.00460 0.90217 1.04483 0.92565 0.92392 0.87809 0.88854 0.88849 0.76411 0.90806 0.90795 0.90241 0.88594 0.77264 0.88863 0.91038 0.84339 0.85949 0.90718 0.76987 1.17965 1.17478 0.83955 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.61 10.28 -34.22 -0.35 -1.96 16 3 C 0.11 0.52 6.70 -39.12 -0.26 0.26 16 4 C 0.10 0.45 6.70 -39.12 -0.26 0.19 16 5 O -0.28 -1.44 9.45 -47.35 -0.45 -1.89 16 6 C 0.04 0.02 5.22 36.00 0.19 0.21 16 7 C 0.51 1.37 7.91 -10.99 -0.09 1.29 16 8 O -0.51 -4.08 16.50 -14.36 -0.24 -4.32 16 9 N -0.73 0.69 5.56 -60.29 -0.33 0.36 16 10 C 0.13 -0.05 5.51 -4.04 -0.02 -0.07 16 11 C -0.12 0.30 3.76 -89.81 -0.34 -0.03 16 12 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 13 C -0.12 0.14 7.47 -25.92 -0.19 -0.05 16 14 C 0.08 -0.10 5.21 -25.92 -0.14 -0.24 16 15 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 16 O -0.56 -0.24 13.67 -35.23 -0.48 -0.72 16 17 C -0.17 0.35 7.47 -25.92 -0.19 0.16 16 18 C -0.17 -0.33 9.04 -39.46 -0.36 -0.68 16 19 C -0.12 -0.29 8.66 -39.57 -0.34 -0.63 16 20 C -0.07 -0.19 5.42 -104.62 -0.57 -0.76 16 21 C -0.07 0.01 2.81 36.00 0.10 0.11 16 22 O -0.55 -0.04 12.74 -35.23 -0.45 -0.49 16 23 Si 0.69 -0.92 29.78 -169.99 -5.06 -5.98 16 24 C -0.14 -0.44 8.60 -39.46 -0.34 -0.78 16 25 H 0.06 -0.02 7.66 -51.93 -0.40 -0.42 16 26 H 0.06 0.00 7.66 -51.93 -0.40 -0.39 16 27 H 0.10 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.09 -0.20 7.67 -51.93 -0.40 -0.59 16 29 H 0.09 -0.22 7.66 -51.93 -0.40 -0.61 16 30 H 0.40 -1.74 8.47 -40.82 -0.35 -2.08 16 31 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.07 0.08 7.85 -51.93 -0.41 -0.32 16 33 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 34 H 0.10 0.00 8.10 -51.93 -0.42 -0.42 16 35 H 0.38 -1.36 9.12 45.56 0.42 -0.95 16 36 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 37 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 38 H 0.14 -0.19 6.30 -52.49 -0.33 -0.52 16 39 H 0.12 0.16 4.87 -52.49 -0.26 -0.10 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 41 H 0.38 -1.93 8.74 45.56 0.40 -1.53 16 42 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 43 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 44 H 0.14 0.21 6.30 -52.48 -0.33 -0.12 16 LS Contribution 367.59 15.07 5.54 5.54 Total: 0.00 -12.89 367.59 -9.07 -21.96 By element: Atomic # 1 Polarization: -7.04 SS G_CDS: -5.43 Total: -12.47 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -1.82 Total: -0.03 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -0.33 Total: 0.36 kcal Atomic # 8 Polarization: -7.41 SS G_CDS: -1.97 Total: -9.38 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.06 Total: -5.98 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -12.89 -9.07 -21.96 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.364 kcal (2) G-P(sol) polarization free energy of solvation -12.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.253 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.069 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.957 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.321 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds