Wall clock time and date at job start Sat Mar 6 2021 18:04:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.34777 * 119.99661 * 2 1 4 4 O 1.21291 * 119.99786 * 180.02562 * 3 2 1 5 5 C 1.50703 * 120.00385 * 359.97438 * 3 2 1 6 6 C 1.50696 * 109.47130 * 180.02562 * 5 3 2 7 7 C 1.38235 * 120.00084 * 269.73052 * 6 5 3 8 8 C 1.38238 * 119.99867 * 179.74537 * 7 6 5 9 9 C 1.38236 * 120.00143 * 0.54881 * 8 7 6 10 10 C 1.50696 * 119.99872 * 179.72184 * 9 8 7 11 11 O 1.42891 * 109.47215 * 244.97652 * 10 9 8 12 12 Si 1.86297 * 109.47167 * 4.98272 * 10 9 8 13 13 C 1.38235 * 119.99603 * 359.70321 * 9 8 7 14 14 C 1.38232 * 120.00029 * 90.00040 * 6 5 3 15 15 C 1.46493 * 119.99982 * 180.02562 * 2 1 3 16 16 H 1.08999 * 112.90705 * 191.25201 * 15 2 1 17 17 C 1.53781 * 113.61563 * 322.50030 * 15 2 1 18 18 C 1.54049 * 87.08031 * 139.97721 * 17 15 2 19 19 H 1.09000 * 113.61076 * 89.06984 * 18 17 15 20 20 C 1.50690 * 113.70074 * 220.05368 * 18 17 15 21 21 N 1.34778 * 120.00001 * 277.42546 * 20 18 17 22 22 O 1.21277 * 120.00296 * 97.41768 * 20 18 17 23 23 C 1.53781 * 113.61552 * 59.99824 * 15 2 1 24 24 H 1.09009 * 109.47104 * 270.00190 * 1 2 3 25 25 H 1.09001 * 109.47299 * 29.99735 * 1 2 3 26 26 H 1.09000 * 109.47462 * 150.00493 * 1 2 3 27 27 H 1.08998 * 109.47102 * 300.00412 * 5 3 2 28 28 H 1.09000 * 109.46647 * 60.00242 * 5 3 2 29 29 H 1.08001 * 119.99970 * 0.02562 * 7 6 5 30 30 H 1.08004 * 119.99650 * 180.27429 * 8 7 6 31 31 H 1.09001 * 109.46790 * 124.98117 * 10 9 8 32 32 H 0.96699 * 113.99895 * 60.00554 * 11 10 9 33 33 H 1.48496 * 110.00285 * 58.68127 * 12 10 9 34 34 H 1.48510 * 109.99642 * 179.97438 * 12 10 9 35 35 H 1.08005 * 119.99667 * 179.97438 * 13 9 8 36 36 H 1.08004 * 120.00209 * 0.02562 * 14 6 5 37 37 H 1.09005 * 113.61471 * 254.53304 * 17 15 2 38 38 H 1.09003 * 113.61469 * 25.43082 * 17 15 2 39 39 H 0.96996 * 119.99827 * 359.97438 * 21 20 18 40 40 H 0.97002 * 119.99950 * 179.97438 * 21 20 18 41 41 H 1.09002 * 113.61445 * 334.56837 * 23 15 2 42 42 H 1.09002 * 113.61408 * 105.38567 * 23 15 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1388 1.1672 0.0000 4 8 3.3517 1.1673 -0.0005 5 6 1.3853 2.4724 -0.0006 6 6 2.3646 3.6178 -0.0011 7 6 2.8094 4.1473 1.1958 8 6 3.7118 5.1946 1.1953 9 6 4.1606 5.7197 -0.0021 10 6 5.1394 6.8655 -0.0025 11 8 4.5206 8.0204 -0.5726 12 14 5.6591 7.2390 1.7471 13 6 3.7117 5.1936 -1.1990 14 6 2.8137 4.1426 -1.1984 15 6 2.1974 -1.2687 -0.0006 16 1 3.2624 -1.1438 0.1954 17 6 1.5374 -2.3615 0.8567 18 6 1.9134 -3.3540 -0.2598 19 1 2.9009 -3.7982 -0.1346 20 6 0.8433 -4.3750 -0.5484 21 7 0.7422 -5.4799 0.2167 22 8 0.0730 -4.2023 -1.4690 23 6 1.8953 -2.1539 -1.2212 24 1 -0.3634 0.0000 1.0277 25 1 -0.3634 0.8900 -0.5138 26 1 -0.3634 -0.8900 -0.5137 27 1 0.7589 2.5299 -0.8908 28 1 0.7583 2.5303 0.8892 29 1 2.4555 3.7399 2.1313 30 1 4.0628 5.6054 2.1305 31 1 6.0155 6.5946 -0.5918 32 1 3.7325 8.3188 -0.0984 33 1 6.2754 6.0360 2.3617 34 1 6.6251 8.3669 1.7601 35 1 4.0620 5.6041 -2.1345 36 1 2.4625 3.7320 -2.1336 37 1 2.0528 -2.5481 1.7989 38 1 0.4623 -2.2299 0.9800 39 1 1.3585 -5.6181 0.9528 40 1 0.0531 -6.1369 0.0311 41 1 0.9182 -1.9656 -1.6660 42 1 2.6991 -2.1718 -1.9572 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12311536_12335836.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:04:29 Heat of formation + Delta-G solvation = -48.899446 kcal Electronic energy + Delta-G solvation = -24483.964680 eV Core-core repulsion = 20817.317567 eV Total energy + Delta-G solvation = -3666.647113 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.146 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.85567 -40.89836 -40.06964 -38.56154 -37.53660 -35.56115 -34.65024 -33.92472 -31.89409 -29.95057 -28.39484 -27.15227 -26.81876 -25.55915 -23.76677 -22.78061 -21.70770 -20.55814 -20.11420 -18.77664 -18.37345 -18.05976 -17.79431 -17.20117 -17.00022 -16.60393 -16.46178 -16.21248 -16.02781 -15.60767 -15.31666 -15.02945 -14.65764 -14.50366 -14.28089 -14.24351 -13.97225 -13.68001 -13.48899 -13.32971 -13.18077 -12.97757 -12.84747 -12.42504 -12.18489 -12.15472 -11.91027 -11.74666 -11.64994 -10.95968 -10.77881 -10.74177 -10.37306 -9.81635 -9.69912 -9.56742 -4.99647 0.28943 0.51440 1.34804 1.52861 1.61959 1.69409 1.87668 2.02678 2.51353 2.78196 3.22253 3.33340 3.49976 3.59569 3.62488 3.67960 3.72744 3.78605 3.89608 4.01410 4.06181 4.07943 4.22418 4.36646 4.39862 4.42726 4.47791 4.50653 4.57103 4.57283 4.63954 4.70310 4.73145 4.91070 5.02789 5.11737 5.12000 5.41119 5.47866 5.59670 5.63156 5.72042 6.04395 6.26115 6.30811 6.61917 7.15677 7.21086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.070 3.930 2 N -0.608 5.608 3 C 0.517 3.483 4 O -0.527 6.527 5 C -0.102 4.102 6 C -0.063 4.063 7 C -0.100 4.100 8 C -0.114 4.114 9 C -0.119 4.119 10 C -0.068 4.068 11 O -0.540 6.540 12 Si 0.686 3.314 13 C -0.090 4.090 14 C -0.104 4.104 15 C 0.123 3.877 16 H 0.124 0.876 17 C -0.132 4.132 18 C -0.139 4.139 19 H 0.119 0.881 20 C 0.529 3.471 21 N -0.854 5.854 22 O -0.541 6.541 23 C -0.129 4.129 24 H 0.060 0.940 25 H 0.077 0.923 26 H 0.078 0.922 27 H 0.105 0.895 28 H 0.105 0.895 29 H 0.124 0.876 30 H 0.126 0.874 31 H 0.113 0.887 32 H 0.378 0.622 33 H -0.258 1.258 34 H -0.255 1.255 35 H 0.125 0.875 36 H 0.122 0.878 37 H 0.084 0.916 38 H 0.093 0.907 39 H 0.403 0.597 40 H 0.402 0.598 41 H 0.101 0.899 42 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.412 -2.076 4.973 6.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 N -0.341 5.341 3 C 0.305 3.695 4 O -0.403 6.403 5 C -0.142 4.142 6 C -0.063 4.063 7 C -0.118 4.118 8 C -0.131 4.131 9 C -0.119 4.119 10 C -0.179 4.179 11 O -0.345 6.345 12 Si 0.588 3.412 13 C -0.108 4.108 14 C -0.122 4.122 15 C 0.019 3.981 16 H 0.142 0.858 17 C -0.171 4.171 18 C -0.161 4.161 19 H 0.137 0.863 20 C 0.313 3.687 21 N -0.417 5.417 22 O -0.417 6.417 23 C -0.168 4.168 24 H 0.079 0.921 25 H 0.095 0.905 26 H 0.096 0.904 27 H 0.123 0.877 28 H 0.124 0.876 29 H 0.142 0.858 30 H 0.144 0.856 31 H 0.130 0.870 32 H 0.226 0.774 33 H -0.183 1.183 34 H -0.180 1.180 35 H 0.143 0.857 36 H 0.140 0.860 37 H 0.103 0.897 38 H 0.111 0.889 39 H 0.231 0.769 40 H 0.233 0.767 41 H 0.119 0.881 42 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -3.002 -1.790 4.489 5.689 hybrid contribution 0.021 -1.026 -0.239 1.054 sum -2.981 -2.816 4.249 5.906 Atomic orbital electron populations 1.21880 0.79185 1.03947 1.02267 1.47806 1.06984 1.05467 1.73810 1.20626 0.88109 0.85006 0.75772 1.90747 1.13830 1.87181 1.48508 1.20739 0.97693 0.90289 1.05451 1.19287 0.97751 0.95673 0.93630 1.20902 0.97240 0.96195 0.97484 1.20915 0.98016 0.97448 0.96732 1.20310 0.99409 0.98472 0.93760 1.25051 0.97138 0.85087 1.10636 1.86504 1.46670 1.43942 1.57429 0.94834 0.86844 0.81492 0.77993 1.20961 0.96573 0.95529 0.97780 1.21019 0.97394 0.96317 0.97432 1.22552 0.98128 0.81186 0.96191 0.85774 1.23417 1.02406 0.93885 0.97361 1.22614 0.99185 0.94206 1.00086 0.86272 1.20370 0.84889 0.82079 0.81340 1.43907 1.38184 1.24109 1.35530 1.90762 1.43758 1.76906 1.30266 1.23356 1.04294 0.92319 0.96868 0.92120 0.90483 0.90366 0.87667 0.87648 0.85802 0.85635 0.87004 0.77440 1.18280 1.18046 0.85684 0.86014 0.89730 0.88869 0.76899 0.76696 0.88101 0.90168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.22 8.84 59.85 0.53 0.31 16 2 N -0.61 0.34 3.08 -173.00 -0.53 -0.19 16 3 C 0.52 0.75 7.67 -10.98 -0.08 0.67 16 4 O -0.53 -3.00 15.52 5.55 0.09 -2.91 16 5 C -0.10 0.13 4.38 -29.04 -0.13 0.00 16 6 C -0.06 -0.07 4.37 -104.63 -0.46 -0.52 16 7 C -0.10 -0.09 9.70 -39.58 -0.38 -0.47 16 8 C -0.11 -0.09 8.67 -39.58 -0.34 -0.44 16 9 C -0.12 -0.18 5.35 -104.63 -0.56 -0.74 16 10 C -0.07 -0.07 2.80 36.00 0.10 0.03 16 11 O -0.54 -0.58 12.83 -35.23 -0.45 -1.04 16 12 Si 0.69 -0.03 29.80 -169.99 -5.07 -5.10 16 13 C -0.09 -0.18 9.69 -39.58 -0.38 -0.57 16 14 C -0.10 -0.17 9.70 -39.58 -0.38 -0.55 16 15 C 0.12 -0.07 4.20 -67.12 -0.28 -0.36 16 16 H 0.12 0.09 7.24 -51.93 -0.38 -0.28 16 17 C -0.13 0.34 7.07 -25.78 -0.18 0.16 16 18 C -0.14 0.26 4.16 -90.82 -0.38 -0.11 16 19 H 0.12 -0.44 8.14 -51.93 -0.42 -0.86 16 20 C 0.53 0.13 7.63 -10.99 -0.08 0.05 16 21 N -0.85 2.53 8.87 31.22 0.28 2.81 16 22 O -0.54 -2.60 16.74 5.56 0.09 -2.50 16 23 C -0.13 0.04 6.93 -25.92 -0.18 -0.14 16 24 H 0.06 -0.26 8.14 -51.92 -0.42 -0.68 16 25 H 0.08 -0.35 6.44 -51.93 -0.33 -0.69 16 26 H 0.08 -0.21 6.34 -51.93 -0.33 -0.54 16 27 H 0.11 -0.33 7.34 -51.93 -0.38 -0.71 16 28 H 0.11 -0.36 8.05 -51.93 -0.42 -0.78 16 29 H 0.12 -0.12 8.06 -52.49 -0.42 -0.55 16 30 H 0.13 -0.15 4.91 -52.48 -0.26 -0.41 16 31 H 0.11 0.18 7.96 -51.93 -0.41 -0.23 16 32 H 0.38 -1.11 8.70 45.56 0.40 -0.71 16 33 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 34 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 35 H 0.13 0.18 8.06 -52.48 -0.42 -0.24 16 36 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 37 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 38 H 0.09 -0.23 6.68 -51.93 -0.35 -0.58 16 39 H 0.40 -2.32 8.83 -40.82 -0.36 -2.68 16 40 H 0.40 -1.30 8.93 -40.82 -0.36 -1.67 16 41 H 0.10 0.10 6.21 -51.93 -0.32 -0.23 16 42 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 346.61 15.07 5.22 5.22 Total: 0.00 -11.18 346.61 -9.24 -20.41 By element: Atomic # 1 Polarization: -8.35 SS G_CDS: -5.66 Total: -14.02 kcal Atomic # 6 Polarization: 0.51 SS G_CDS: -3.20 Total: -2.68 kcal Atomic # 7 Polarization: 2.87 SS G_CDS: -0.26 Total: 2.61 kcal Atomic # 8 Polarization: -6.18 SS G_CDS: -0.27 Total: -6.45 kcal Atomic # 14 Polarization: -0.03 SS G_CDS: -5.07 Total: -5.10 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -11.18 -9.24 -20.41 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_12335836.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.485 kcal (2) G-P(sol) polarization free energy of solvation -11.179 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.664 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.236 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.414 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds