Wall clock time and date at job start Sat Mar 6 2021 18:07:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34774 * 120.00162 * 2 1 4 4 O 1.21274 * 120.00267 * 179.97438 * 3 2 1 5 5 C 1.50707 * 120.00002 * 0.02562 * 3 2 1 6 6 O 1.42895 * 109.47240 * 179.97438 * 5 3 2 7 7 C 1.35902 * 117.00143 * 180.02562 * 6 5 3 8 8 C 1.38717 * 120.05576 * 180.29827 * 7 6 5 9 9 C 1.38165 * 119.94198 * 180.24842 * 8 7 6 10 10 C 1.50699 * 119.97216 * 179.74695 * 9 8 7 11 11 O 1.42901 * 109.46830 * 299.72675 * 10 9 8 12 12 Si 1.86298 * 109.46950 * 179.73112 * 10 9 8 13 13 C 1.38252 * 120.05599 * 359.47653 * 9 8 7 14 14 C 1.38289 * 120.10931 * 0.22742 * 13 9 8 15 15 C 1.38131 * 120.05803 * 0.04553 * 14 13 9 16 16 C 1.46496 * 119.99782 * 180.02562 * 2 1 3 17 17 H 1.09000 * 112.84902 * 170.33329 * 16 2 1 18 18 C 1.53776 * 113.61494 * 301.52687 * 16 2 1 19 19 C 1.53785 * 87.07938 * 139.98322 * 18 16 2 20 20 H 1.08994 * 113.61509 * 89.11872 * 19 18 16 21 21 C 1.50704 * 113.61067 * 220.01681 * 19 18 16 22 22 N 1.34777 * 119.99420 * 180.02562 * 21 19 18 23 23 O 1.21280 * 119.99951 * 0.02562 * 21 19 18 24 24 C 1.53782 * 113.61445 * 39.13671 * 16 2 1 25 25 H 1.08996 * 109.47157 * 89.99228 * 1 2 3 26 26 H 1.09000 * 109.47288 * 210.00088 * 1 2 3 27 27 H 1.08999 * 109.46891 * 329.99694 * 1 2 3 28 28 H 1.09003 * 109.46858 * 59.99898 * 5 3 2 29 29 H 1.08993 * 109.47231 * 300.00199 * 5 3 2 30 30 H 1.07994 * 120.02737 * 359.97438 * 8 7 6 31 31 H 1.08991 * 109.47351 * 59.72823 * 10 9 8 32 32 H 0.96708 * 114.00246 * 299.99864 * 11 10 9 33 33 H 1.48506 * 109.99834 * 180.02562 * 12 10 9 34 34 H 1.48502 * 110.00011 * 301.31529 * 12 10 9 35 35 H 1.07993 * 119.94280 * 180.25239 * 13 9 8 36 36 H 1.08001 * 119.97106 * 180.02562 * 14 13 9 37 37 H 1.07995 * 120.02853 * 180.02562 * 15 14 13 38 38 H 1.09002 * 113.61494 * 254.53095 * 18 16 2 39 39 H 1.08997 * 113.61505 * 25.34874 * 18 16 2 40 40 H 0.96998 * 120.00801 * 359.97438 * 22 21 19 41 41 H 0.97009 * 119.99482 * 180.02562 * 22 21 19 42 42 H 1.08997 * 113.61600 * 334.56274 * 24 16 2 43 43 H 1.08999 * 113.61289 * 105.47022 * 24 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1672 0.0005 5 6 1.3854 2.4723 0.0006 6 8 2.3140 3.5585 0.0011 7 6 1.7946 4.8143 0.0022 8 6 2.6386 5.9152 -0.0036 9 6 2.1080 7.1909 0.0028 10 6 3.0243 8.3873 0.0023 11 8 3.8495 8.3557 1.1685 12 14 2.0073 9.9483 0.0035 13 6 0.7372 7.3707 0.0039 14 6 -0.1062 6.2748 0.0034 15 6 0.4192 4.9974 0.0028 16 6 2.1974 -1.2687 -0.0006 17 1 3.2666 -1.1401 -0.1692 18 6 1.8674 -2.1711 1.2000 19 6 1.9074 -3.3558 0.2203 20 1 2.8972 -3.7989 0.1112 21 6 0.8300 -4.3802 0.4675 22 7 0.7466 -5.4729 -0.3169 23 8 0.0383 -4.2212 1.3723 24 6 1.5589 -2.3482 -0.8904 25 1 -0.3633 0.0001 -1.0276 26 1 -0.3634 -0.8900 0.5138 27 1 -0.3633 0.8900 0.5139 28 1 0.7591 2.5298 0.8909 29 1 0.7584 2.5303 -0.8891 30 1 3.7094 5.7752 -0.0085 31 1 3.6524 8.3636 -0.8880 32 1 3.3563 8.3743 2.0001 33 1 2.8993 11.1356 0.0024 34 1 1.1214 9.9782 -1.1880 35 1 0.3245 8.3687 0.0047 36 1 -1.1767 6.4179 0.0038 37 1 -0.2399 4.1419 0.0020 38 1 2.6546 -2.2008 1.9534 39 1 0.8808 -1.9879 1.6257 40 1 1.3796 -5.5999 -1.0408 41 1 0.0529 -6.1322 -0.1580 42 1 0.4873 -2.2146 -1.0382 43 1 2.0975 -2.5207 -1.8222 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12311536_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:07:15 Heat of formation + Delta-G solvation = -80.033138 kcal Electronic energy + Delta-G solvation = -26354.345174 eV Core-core repulsion = 22367.665811 eV Total energy + Delta-G solvation = -3986.679363 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.145 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.95346 -41.34300 -40.46713 -39.14242 -38.44577 -37.22610 -35.69371 -34.58573 -32.46976 -31.70771 -29.66423 -28.27248 -27.03680 -26.78746 -26.53131 -23.67663 -23.08249 -21.96478 -20.61838 -20.14087 -19.45535 -18.66256 -18.23737 -17.86037 -17.61802 -17.54479 -17.32811 -17.00700 -16.52835 -16.43331 -16.18285 -15.85916 -15.45206 -15.25209 -15.04394 -14.73590 -14.36539 -14.28176 -14.19597 -13.99556 -13.64271 -13.44241 -13.28873 -13.10134 -12.93428 -12.62176 -12.40026 -12.18708 -12.12667 -11.99812 -11.69293 -11.67299 -11.05967 -10.86906 -10.66637 -10.50958 -9.92671 -9.79370 -9.29783 -4.98495 0.19957 0.38229 1.26663 1.32328 1.39377 1.58084 1.65319 1.97000 2.38166 2.65952 2.66949 3.21791 3.35548 3.43551 3.51686 3.66884 3.68178 3.78310 3.83148 3.92982 3.98820 4.11259 4.16020 4.24132 4.25892 4.34373 4.48433 4.51236 4.56170 4.60858 4.62476 4.66152 4.79601 4.88221 4.93807 4.97590 5.14100 5.23677 5.36251 5.42270 5.44655 5.69224 5.87609 6.13050 6.33202 6.45674 6.74491 6.93269 7.32823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.596 5.596 3 C 0.511 3.489 4 O -0.572 6.572 5 C 0.041 3.959 6 O -0.324 6.324 7 C 0.113 3.887 8 C -0.150 4.150 9 C -0.084 4.084 10 C -0.087 4.087 11 O -0.558 6.558 12 Si 0.796 3.204 13 C -0.157 4.157 14 C -0.069 4.069 15 C -0.203 4.203 16 C 0.115 3.885 17 H 0.110 0.890 18 C -0.133 4.133 19 C -0.129 4.129 20 H 0.142 0.858 21 C 0.526 3.474 22 N -0.837 5.837 23 O -0.592 6.592 24 C -0.116 4.116 25 H 0.083 0.917 26 H 0.081 0.919 27 H 0.096 0.904 28 H 0.123 0.877 29 H 0.124 0.876 30 H 0.111 0.889 31 H 0.101 0.899 32 H 0.396 0.604 33 H -0.302 1.302 34 H -0.279 1.279 35 H 0.150 0.850 36 H 0.164 0.836 37 H 0.159 0.841 38 H 0.073 0.927 39 H 0.091 0.909 40 H 0.418 0.582 41 H 0.406 0.594 42 H 0.098 0.902 43 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.993 -2.734 -2.404 8.783 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.329 5.329 3 C 0.299 3.701 4 O -0.450 6.450 5 C -0.037 4.037 6 O -0.237 6.237 7 C 0.068 3.932 8 C -0.169 4.169 9 C -0.084 4.084 10 C -0.195 4.195 11 O -0.366 6.366 12 Si 0.701 3.299 13 C -0.175 4.175 14 C -0.087 4.087 15 C -0.221 4.221 16 C 0.012 3.988 17 H 0.128 0.872 18 C -0.172 4.172 19 C -0.151 4.151 20 H 0.159 0.841 21 C 0.311 3.689 22 N -0.400 5.400 23 O -0.473 6.473 24 C -0.154 4.154 25 H 0.101 0.899 26 H 0.099 0.901 27 H 0.114 0.886 28 H 0.140 0.860 29 H 0.141 0.859 30 H 0.129 0.871 31 H 0.118 0.882 32 H 0.245 0.755 33 H -0.230 1.230 34 H -0.206 1.206 35 H 0.167 0.833 36 H 0.182 0.818 37 H 0.177 0.823 38 H 0.092 0.908 39 H 0.109 0.891 40 H 0.250 0.750 41 H 0.237 0.763 42 H 0.116 0.884 43 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -7.294 -1.849 -2.673 7.985 hybrid contribution 0.720 -1.146 -0.526 1.452 sum -6.574 -2.995 -3.200 7.901 Atomic orbital electron populations 1.22214 0.76811 1.05175 1.04079 1.47778 1.08385 1.04450 1.72250 1.20592 0.87569 0.86025 0.75881 1.90740 1.16009 1.87718 1.50561 1.22766 0.91497 0.82926 1.06480 1.86121 1.36020 1.12579 1.89002 1.19215 0.93158 0.83491 0.97354 1.20286 0.99540 0.90669 1.06390 1.20214 0.94953 0.93936 0.99336 1.25442 0.98265 1.04834 0.90993 1.86477 1.36593 1.97177 1.16399 0.93497 0.78310 0.71615 0.86446 1.21227 0.91900 1.00429 1.03907 1.21343 1.01590 0.90763 0.94984 1.21623 0.92598 1.00420 1.07468 1.22637 0.97818 0.81098 0.97260 0.87233 1.23323 1.03410 0.93450 0.96976 1.22602 0.99662 0.93370 0.99465 0.84076 1.20664 0.84853 0.82756 0.80584 1.43806 1.36982 1.23723 1.35493 1.90743 1.44813 1.78048 1.33656 1.23331 1.02820 0.91819 0.97456 0.89893 0.90068 0.88565 0.85952 0.85854 0.87108 0.88165 0.75454 1.23005 1.20562 0.83276 0.81850 0.82313 0.90838 0.89084 0.75031 0.76343 0.88356 0.87884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.50 8.84 127.77 1.13 0.62 16 2 N -0.60 0.67 3.08 -819.67 -2.53 -1.86 16 3 C 0.51 2.66 7.75 87.66 0.68 3.34 16 4 O -0.57 -9.22 15.97 16.03 0.26 -8.97 16 5 C 0.04 -0.03 3.77 71.24 0.27 0.23 16 6 O -0.32 -2.70 9.67 -73.41 -0.71 -3.41 16 7 C 0.11 0.58 6.69 22.51 0.15 0.73 16 8 C -0.15 -1.10 9.56 22.37 0.21 -0.88 16 9 C -0.08 -0.22 5.39 -19.88 -0.11 -0.33 16 10 C -0.09 -0.19 2.82 71.24 0.20 0.01 16 11 O -0.56 -2.04 12.77 -148.98 -1.90 -3.94 16 12 Si 0.80 -1.54 29.79 68.60 2.04 0.51 16 13 C -0.16 0.31 8.67 22.29 0.19 0.50 16 14 C -0.07 0.28 10.04 22.26 0.22 0.51 16 15 C -0.20 0.43 9.04 22.37 0.20 0.63 16 16 C 0.12 -0.12 4.21 45.52 0.19 0.07 16 17 H 0.11 0.31 7.21 -2.39 -0.02 0.29 16 18 C -0.13 0.06 6.94 31.12 0.22 0.28 16 19 C -0.13 0.62 4.15 -10.95 -0.05 0.58 16 20 H 0.14 -1.28 8.14 -2.39 -0.02 -1.30 16 21 C 0.53 -0.22 7.63 87.66 0.67 0.45 16 22 N -0.84 6.23 8.87 -173.53 -1.54 4.69 16 23 O -0.59 -5.69 16.74 -3.03 -0.05 -5.74 16 24 C -0.12 0.77 7.09 31.18 0.22 0.99 16 25 H 0.08 -0.98 8.14 -2.39 -0.02 -1.00 16 26 H 0.08 -0.60 6.33 -2.39 -0.02 -0.61 16 27 H 0.10 -1.23 6.44 -2.39 -0.02 -1.25 16 28 H 0.12 -0.86 6.92 -2.39 -0.02 -0.88 16 29 H 0.12 -0.90 7.63 -2.39 -0.02 -0.92 16 30 H 0.11 1.22 8.06 -2.91 -0.02 1.20 16 31 H 0.10 0.43 7.96 -2.39 -0.02 0.41 16 32 H 0.40 -1.96 8.70 -74.05 -0.64 -2.61 16 33 H -0.30 -1.76 7.11 99.48 0.71 -1.05 16 34 H -0.28 -0.44 7.11 99.48 0.71 0.27 16 35 H 0.15 -1.00 4.87 -2.91 -0.01 -1.01 16 36 H 0.16 -1.72 8.06 -2.91 -0.02 -1.74 16 37 H 0.16 -1.42 6.30 -2.91 -0.02 -1.44 16 38 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 39 H 0.09 0.18 6.11 -2.39 -0.01 0.17 16 40 H 0.42 -5.72 8.83 -92.71 -0.82 -6.54 16 41 H 0.41 -3.13 8.93 -92.70 -0.83 -3.95 16 42 H 0.10 -0.70 6.77 -2.39 -0.02 -0.72 16 43 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 Total: 0.00 -33.42 355.38 -1.19 -34.61 By element: Atomic # 1 Polarization: -22.46 SS G_CDS: -1.17 Total: -23.63 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: 4.41 Total: 7.74 kcal Atomic # 7 Polarization: 6.90 SS G_CDS: -4.07 Total: 2.83 kcal Atomic # 8 Polarization: -19.65 SS G_CDS: -2.41 Total: -22.06 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: 2.04 Total: 0.51 kcal Total: -33.42 -1.19 -34.61 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.420 kcal (2) G-P(sol) polarization free energy of solvation -33.423 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.842 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.191 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.614 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.033 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds