Wall clock time and date at job start Sat Mar 6 2021 17:13:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35711 * 117.00064 * 2 1 4 4 C 1.38694 * 119.86086 * 0.02562 * 3 2 1 5 5 C 1.38442 * 120.02883 * 179.97438 * 4 3 2 6 6 O 1.35656 * 120.12011 * 180.02562 * 5 4 3 7 7 C 1.42907 * 116.99833 * 359.97438 * 6 5 4 8 8 C 1.40299 * 119.75942 * 0.30168 * 5 4 3 9 9 C 1.47298 * 120.13254 * 179.72546 * 8 5 4 10 10 O 1.21619 * 120.00157 * 310.42733 * 9 8 5 11 11 N 1.34782 * 120.00157 * 130.43689 * 9 8 5 12 12 C 1.46501 * 119.99740 * 4.40781 * 11 9 8 13 13 C 1.46499 * 120.00050 * 184.41369 * 11 9 8 14 14 C 1.52999 * 109.47152 * 89.99622 * 13 11 9 15 15 H 1.08996 * 112.84728 * 314.66268 * 14 13 11 16 16 C 1.53782 * 113.61522 * 85.86646 * 14 13 11 17 17 C 1.53951 * 87.02156 * 139.94752 * 16 14 13 18 18 H 1.08999 * 113.53626 * 89.18502 * 17 16 14 19 19 O 1.42893 * 113.74651 * 220.05427 * 17 16 14 20 20 C 1.53780 * 113.61158 * 183.47094 * 14 13 11 21 21 C 1.39859 * 119.73226 * 359.42161 * 8 5 4 22 22 C 1.37547 * 119.95921 * 0.55468 * 21 8 5 23 23 C 1.50701 * 119.87661 * 179.76336 * 22 21 8 24 24 O 1.42896 * 109.47124 * 254.97904 * 23 22 21 25 25 Si 1.86294 * 109.47073 * 14.98217 * 23 22 21 26 26 H 1.08999 * 109.47383 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.47258 * 299.99808 * 1 2 3 28 28 H 1.09002 * 109.46869 * 60.00054 * 1 2 3 29 29 H 1.07998 * 119.98332 * 0.02562 * 4 3 2 30 30 H 1.09001 * 109.46853 * 180.02562 * 7 6 5 31 31 H 1.08998 * 109.46891 * 59.99991 * 7 6 5 32 32 H 1.09003 * 109.47006 * 299.99904 * 7 6 5 33 33 H 1.09001 * 109.46856 * 93.00854 * 12 11 9 34 34 H 1.09006 * 109.46661 * 213.00903 * 12 11 9 35 35 H 1.08995 * 109.47476 * 333.00773 * 12 11 9 36 36 H 1.08996 * 109.46994 * 209.99755 * 13 11 9 37 37 H 1.09002 * 109.46847 * 329.99805 * 13 11 9 38 38 H 1.08996 * 113.61205 * 254.53189 * 16 14 13 39 39 H 1.09000 * 113.60952 * 25.42566 * 16 14 13 40 40 H 0.96699 * 114.00295 * 277.60444 * 19 17 16 41 41 H 1.09007 * 113.61767 * 334.56835 * 20 14 13 42 42 H 1.09001 * 113.61883 * 105.38470 * 20 14 13 43 43 H 1.07990 * 120.02127 * 180.30082 * 21 8 5 44 44 H 1.09002 * 109.46864 * 134.98026 * 23 22 21 45 45 H 0.96698 * 113.99893 * 180.02562 * 24 23 22 46 46 H 1.48499 * 110.00267 * 299.99772 * 25 23 22 47 47 H 1.48502 * 110.00375 * 61.31861 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2092 0.0000 4 6 1.2870 2.3705 0.0005 5 6 1.9119 3.6059 0.0011 6 8 1.1721 4.7430 0.0021 7 6 -0.2490 4.5924 0.0021 8 6 3.3130 3.6775 -0.0053 9 6 3.9864 4.9876 -0.0109 10 8 3.6534 5.8391 -0.8129 11 7 4.9718 5.2426 0.8726 12 6 5.4393 4.1862 1.7735 13 6 5.5754 6.5762 0.9320 14 6 4.8043 7.4408 1.9313 15 1 3.7235 7.3588 1.8164 16 6 5.2835 7.2797 3.3837 17 6 5.1012 8.8015 3.5280 18 1 4.1013 9.0914 3.8511 19 8 6.1343 9.4356 4.2845 20 6 5.3073 8.8921 2.0068 21 6 4.0678 2.5001 0.0000 22 6 3.4353 1.2787 0.0000 23 6 4.2504 0.0112 0.0004 24 8 4.2147 -0.5785 -1.3007 25 14 6.0132 0.4067 0.4549 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 0.2086 2.3111 0.0014 30 1 -0.7186 5.5761 0.0025 31 1 -0.5561 4.0424 0.8916 32 1 -0.5562 4.0439 -0.8884 33 1 6.2888 3.6735 1.3224 34 1 5.7432 4.6267 2.7232 35 1 4.6337 3.4724 1.9455 36 1 6.6141 6.4909 1.2509 37 1 5.5349 7.0375 -0.0547 38 1 4.6041 6.6966 4.0054 39 1 6.3203 6.9542 3.4677 40 1 6.0102 9.3820 5.2420 41 1 6.3508 9.0084 1.7137 42 1 4.6480 9.6088 1.5173 43 1 5.1466 2.5499 0.0000 44 1 3.8357 -0.6872 0.7273 45 1 4.7191 -1.4002 -1.3741 46 1 6.5901 1.3581 -0.5285 47 1 6.0672 0.9912 1.8190 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:13:12 Heat of formation + Delta-G solvation = -114.101938 kcal Electronic energy + Delta-G solvation = -30965.499802 eV Core-core repulsion = 26696.775345 eV Total energy + Delta-G solvation = -4268.724457 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.13537 -40.92687 -40.15142 -39.67867 -38.33399 -37.04596 -36.73194 -35.55125 -32.38089 -32.02420 -29.56911 -29.12335 -28.29144 -27.45268 -26.68169 -26.00771 -24.57222 -23.39137 -22.54226 -20.63750 -20.42206 -19.80841 -18.50228 -18.48286 -18.40515 -18.04606 -17.43408 -17.12471 -16.88964 -16.68419 -16.54317 -16.17507 -16.00467 -15.86544 -15.48527 -15.23234 -15.04250 -14.70188 -14.30094 -14.16487 -14.11278 -13.81278 -13.71718 -13.55095 -13.42623 -13.25350 -13.10912 -12.86272 -12.72565 -12.67409 -12.59056 -12.33736 -12.11613 -11.91924 -11.78010 -11.63513 -11.27091 -10.84322 -10.68276 -10.24710 -9.89567 -9.61979 -9.13197 -5.04136 -0.10081 0.09639 1.23679 1.56137 1.74864 1.87976 1.98293 2.03979 2.08967 2.46007 3.23533 3.34333 3.48498 3.52981 3.57463 3.62932 3.68574 3.82798 3.89422 3.92994 3.95556 4.03236 4.04531 4.08144 4.11720 4.15430 4.20224 4.25497 4.28311 4.40961 4.41971 4.45649 4.46936 4.61727 4.70217 4.74924 4.76898 4.81236 4.88276 4.92689 4.99996 5.04953 5.15397 5.29052 5.36487 5.58963 5.97310 6.23553 6.38661 6.69950 6.70261 7.27223 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.296 6.296 3 C 0.219 3.781 4 C -0.307 4.307 5 C 0.225 3.775 6 O -0.293 6.293 7 C 0.022 3.978 8 C -0.200 4.200 9 C 0.573 3.427 10 O -0.517 6.517 11 N -0.613 5.613 12 C 0.070 3.930 13 C 0.128 3.872 14 C -0.123 4.123 15 H 0.096 0.904 16 C -0.165 4.165 17 C 0.076 3.924 18 H 0.081 0.919 19 O -0.560 6.560 20 C -0.120 4.120 21 C -0.017 4.017 22 C -0.150 4.150 23 C -0.053 4.053 24 O -0.543 6.543 25 Si 0.671 3.329 26 H 0.107 0.893 27 H 0.058 0.942 28 H 0.059 0.941 29 H 0.146 0.854 30 H 0.107 0.893 31 H 0.058 0.942 32 H 0.060 0.940 33 H 0.053 0.947 34 H 0.077 0.923 35 H 0.076 0.924 36 H 0.081 0.919 37 H 0.090 0.910 38 H 0.067 0.933 39 H 0.089 0.911 40 H 0.378 0.622 41 H 0.092 0.908 42 H 0.076 0.924 43 H 0.139 0.861 44 H 0.075 0.925 45 H 0.380 0.620 46 H -0.248 1.248 47 H -0.247 1.247 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.523 -5.828 4.904 7.768 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.207 6.207 3 C 0.171 3.829 4 C -0.327 4.327 5 C 0.176 3.824 6 O -0.204 6.204 7 C -0.072 4.072 8 C -0.204 4.204 9 C 0.361 3.639 10 O -0.393 6.393 11 N -0.346 5.346 12 C -0.073 4.073 13 C 0.006 3.994 14 C -0.143 4.143 15 H 0.114 0.886 16 C -0.203 4.203 17 C 0.017 3.983 18 H 0.099 0.901 19 O -0.365 6.365 20 C -0.158 4.158 21 C -0.035 4.035 22 C -0.151 4.151 23 C -0.164 4.164 24 O -0.349 6.349 25 Si 0.572 3.428 26 H 0.126 0.874 27 H 0.077 0.923 28 H 0.078 0.922 29 H 0.164 0.836 30 H 0.125 0.875 31 H 0.077 0.923 32 H 0.079 0.921 33 H 0.071 0.929 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.099 0.901 37 H 0.109 0.891 38 H 0.086 0.914 39 H 0.108 0.892 40 H 0.225 0.775 41 H 0.111 0.889 42 H 0.095 0.905 43 H 0.156 0.844 44 H 0.093 0.907 45 H 0.227 0.773 46 H -0.173 1.173 47 H -0.172 1.172 Dipole moment (debyes) X Y Z Total from point charges -1.147 -4.075 3.979 5.810 hybrid contribution -1.420 -0.194 0.641 1.570 sum -2.567 -4.269 4.620 6.794 Atomic orbital electron populations 1.23211 0.77725 1.04788 1.01608 1.86133 1.21795 1.25997 1.86750 1.18633 0.91031 0.83978 0.89240 1.21255 1.01085 0.91335 1.19017 1.18558 0.89480 0.85111 0.89201 1.86209 1.19459 1.28100 1.86594 1.23220 0.77777 1.04706 1.01542 1.18858 0.90675 0.93852 1.17054 1.17875 0.79070 0.86578 0.80385 1.90816 1.63312 1.47372 1.37768 1.47718 1.37527 1.12228 1.37156 1.22053 0.99932 0.91194 0.94145 1.21469 0.95880 0.81304 1.00758 1.22719 1.01016 0.95507 0.95028 0.88619 1.23807 1.02177 0.97536 0.96740 1.23348 0.90929 0.91505 0.92502 0.90141 1.86535 1.48474 1.79456 1.22084 1.23047 1.02861 0.95995 0.93940 1.20812 0.99188 0.89989 0.93496 1.18409 0.90465 0.93955 1.12232 1.24392 1.08588 0.94346 0.89030 1.86530 1.76304 1.43226 1.28805 0.95272 0.79268 0.88105 0.80186 0.87445 0.92338 0.92216 0.83631 0.87452 0.92330 0.92138 0.92859 0.90468 0.90545 0.90065 0.89134 0.91396 0.89201 0.77457 0.88898 0.90485 0.84366 0.90747 0.77282 1.17292 1.17170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.80 101.05 0.99 0.95 16 2 O -0.30 -0.51 9.80 -18.84 -0.18 -0.70 16 3 C 0.22 0.59 6.67 -39.06 -0.26 0.33 16 4 C -0.31 -0.61 8.01 -39.34 -0.31 -0.93 16 5 C 0.23 0.89 6.67 -38.73 -0.26 0.63 16 6 O -0.29 -1.17 9.55 -27.61 -0.26 -1.44 16 7 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 8 C -0.20 -0.92 4.90 -104.83 -0.51 -1.44 16 9 C 0.57 3.26 6.93 -12.57 -0.09 3.17 16 10 O -0.52 -4.71 16.10 -3.68 -0.06 -4.77 16 11 N -0.61 -1.67 2.87 -182.90 -0.53 -2.20 16 12 C 0.07 0.01 9.09 59.85 0.54 0.56 16 13 C 0.13 0.22 5.28 -4.04 -0.02 0.20 16 14 C -0.12 -0.14 3.96 -89.81 -0.36 -0.49 16 15 H 0.10 0.26 8.14 -51.93 -0.42 -0.17 16 16 C -0.16 0.02 6.92 -25.83 -0.18 -0.15 16 17 C 0.08 0.04 5.21 -25.83 -0.13 -0.09 16 18 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 19 O -0.56 -0.79 13.68 -35.23 -0.48 -1.28 16 20 C -0.12 -0.13 7.47 -25.92 -0.19 -0.32 16 21 C -0.02 -0.05 6.21 -39.23 -0.24 -0.30 16 22 C -0.15 -0.44 5.30 -104.52 -0.55 -0.99 16 23 C -0.05 -0.03 2.36 36.01 0.08 0.05 16 24 O -0.54 -0.63 12.86 -35.23 -0.45 -1.09 16 25 Si 0.67 -0.82 30.19 -169.99 -5.13 -5.95 16 26 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 27 H 0.06 -0.19 7.65 -51.93 -0.40 -0.58 16 28 H 0.06 -0.14 7.65 -51.93 -0.40 -0.54 16 29 H 0.15 -0.10 4.50 -52.49 -0.24 -0.34 16 30 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 31 H 0.06 -0.14 7.66 -51.93 -0.40 -0.53 16 32 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 33 H 0.05 -0.02 7.56 -51.93 -0.39 -0.42 16 34 H 0.08 -0.11 7.53 -51.93 -0.39 -0.50 16 35 H 0.08 0.03 5.68 -51.93 -0.30 -0.27 16 36 H 0.08 0.00 7.80 -51.93 -0.41 -0.41 16 37 H 0.09 0.29 7.36 -51.93 -0.38 -0.09 16 38 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 39 H 0.09 -0.02 7.92 -51.93 -0.41 -0.43 16 40 H 0.38 -1.00 9.12 45.56 0.42 -0.59 16 41 H 0.09 0.12 8.10 -51.93 -0.42 -0.30 16 42 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 43 H 0.14 0.34 3.39 -52.49 -0.18 0.16 16 44 H 0.07 -0.04 7.82 -51.93 -0.41 -0.45 16 45 H 0.38 -1.51 8.74 45.56 0.40 -1.11 16 46 H -0.25 -0.41 6.74 56.52 0.38 -0.03 16 47 H -0.25 0.02 7.11 56.52 0.40 0.43 16 LS Contribution 378.47 15.07 5.70 5.70 Total: 0.00 -10.96 378.47 -7.95 -18.91 By element: Atomic # 1 Polarization: -3.31 SS G_CDS: -6.05 Total: -9.36 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -0.51 Total: 2.16 kcal Atomic # 7 Polarization: -1.67 SS G_CDS: -0.53 Total: -2.20 kcal Atomic # 8 Polarization: -7.82 SS G_CDS: -1.44 Total: -9.27 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.13 Total: -5.95 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -10.96 -7.95 -18.91 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.194 kcal (2) G-P(sol) polarization free energy of solvation -10.959 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.153 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.908 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.102 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds