Wall clock time and date at job start Sat Mar 6 2021 17:13:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.46504 * 119.99627 * 2 1 4 4 C 1.52997 * 109.47276 * 269.99651 * 3 2 1 5 5 H 1.08997 * 112.84806 * 316.20279 * 4 3 2 6 6 C 1.53783 * 113.61456 * 87.50123 * 4 3 2 7 7 C 1.53780 * 87.08152 * 139.98453 * 6 4 3 8 8 H 1.08996 * 113.61820 * 89.11787 * 7 6 4 9 9 O 1.42905 * 113.68942 * 220.01176 * 7 6 4 10 10 C 1.53779 * 113.61632 * 184.99795 * 4 3 2 11 11 C 1.34770 * 120.00561 * 179.97438 * 2 1 3 12 12 O 1.21697 * 120.00396 * 180.02562 * 11 2 1 13 13 C 1.46437 * 119.99678 * 0.02562 * 11 2 1 14 14 C 1.34806 * 119.99594 * 180.02562 * 13 11 2 15 15 C 1.47216 * 119.99743 * 180.02562 * 14 13 11 16 16 C 1.39836 * 120.16612 * 0.27230 * 15 14 13 17 17 C 1.37893 * 119.82406 * 180.27499 * 16 15 14 18 18 C 1.38403 * 120.16807 * 359.44935 * 17 16 15 19 19 C 1.50701 * 119.82534 * 180.30057 * 18 17 16 20 20 O 1.42906 * 109.47291 * 65.00439 * 19 18 17 21 21 Si 1.86306 * 109.47059 * 184.99948 * 19 18 17 22 22 C 1.38404 * 120.34880 * 0.27992 * 18 17 16 23 23 C 1.37897 * 120.16570 * 359.97438 * 22 18 17 24 24 H 1.08997 * 109.47361 * 269.99907 * 1 2 3 25 25 H 1.09003 * 109.47343 * 30.00546 * 1 2 3 26 26 H 1.09001 * 109.46983 * 150.00133 * 1 2 3 27 27 H 1.08996 * 109.47071 * 29.99876 * 3 2 1 28 28 H 1.08998 * 109.47018 * 149.99960 * 3 2 1 29 29 H 1.09001 * 113.61493 * 254.53194 * 6 4 3 30 30 H 1.09000 * 113.61328 * 25.43458 * 6 4 3 31 31 H 0.96697 * 113.99891 * 277.53335 * 9 7 6 32 32 H 1.08996 * 113.61495 * 334.57228 * 10 4 3 33 33 H 1.09000 * 113.61084 * 105.47573 * 10 4 3 34 34 H 1.07996 * 120.00126 * 359.97438 * 13 11 2 35 35 H 1.07996 * 120.00806 * 0.02562 * 14 13 11 36 36 H 1.08004 * 120.09330 * 0.02562 * 16 15 14 37 37 H 1.08002 * 119.91884 * 179.73352 * 17 16 15 38 38 H 1.08994 * 109.47276 * 305.00268 * 19 18 17 39 39 H 0.96691 * 113.99725 * 180.02562 * 20 19 18 40 40 H 1.48499 * 109.99933 * 178.67922 * 21 19 18 41 41 H 1.48498 * 110.00204 * 300.00513 * 21 19 18 42 42 H 1.07992 * 119.92001 * 180.02562 * 22 18 17 43 43 H 1.08003 * 120.08222 * 179.97438 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.4525 1.7105 -1.4425 5 1 2.7834 0.8931 -2.0831 6 6 1.3071 2.5419 -2.0438 7 6 2.3901 3.4192 -2.6935 8 1 2.7033 3.0696 -3.6772 9 8 2.0875 4.8157 -2.6714 10 6 3.3231 2.9731 -1.5553 11 6 2.1389 -1.1671 0.0005 12 8 3.3559 -1.1670 0.0010 13 6 1.4068 -2.4353 0.0005 14 6 2.0810 -3.6027 0.0016 15 6 1.3450 -4.8776 0.0010 16 6 -0.0534 -4.8818 -0.0064 17 6 -0.7356 -6.0801 -0.0011 18 6 -0.0399 -7.2766 -0.0001 19 6 -0.7934 -8.5817 -0.0012 20 8 -1.5228 -8.7096 -1.2234 21 14 0.4113 -9.9944 0.1537 22 6 1.3441 -7.2807 0.0015 23 6 2.0406 -6.0906 0.0016 24 1 -0.3634 0.0000 1.0276 25 1 -0.3634 0.8899 -0.5139 26 1 -0.3633 -0.8900 -0.5138 27 1 1.6083 2.0284 0.5138 28 1 3.1498 1.1385 0.5138 29 1 0.7001 1.9928 -2.7637 30 1 0.7098 3.0663 -1.2978 31 1 1.5011 5.1024 -3.3848 32 1 3.2771 3.6152 -0.6758 33 1 4.3437 2.7719 -1.8810 34 1 0.3269 -2.4354 0.0005 35 1 3.1609 -3.6027 0.0028 36 1 -0.5977 -3.9490 -0.0121 37 1 -1.8156 -6.0851 -0.0024 38 1 -1.4868 -8.6017 0.8395 39 1 -2.0329 -9.5281 -1.2931 40 1 -0.3215 -11.2856 0.1859 41 1 1.3623 -9.9783 -0.9867 42 1 1.8799 -8.2183 0.0019 43 1 3.1206 -6.0954 0.0033 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:13:46 Heat of formation + Delta-G solvation = -36.988892 kcal Electronic energy + Delta-G solvation = -23723.375788 eV Core-core repulsion = 20122.671067 eV Total energy + Delta-G solvation = -3600.704722 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.151 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.20336 -40.58821 -39.90868 -37.91090 -36.82468 -35.61322 -35.17347 -32.14917 -31.65895 -29.72847 -27.76238 -26.76268 -26.66809 -24.39476 -23.98478 -22.90905 -21.42675 -20.56504 -19.61376 -18.68644 -18.56502 -18.47975 -17.49182 -17.18847 -16.71246 -16.41088 -16.31333 -16.07668 -15.38141 -15.19759 -15.10372 -14.77494 -14.50354 -14.34106 -14.15989 -14.00251 -13.84567 -13.68619 -13.44997 -13.39851 -13.17741 -12.90920 -12.74476 -12.35351 -12.22487 -12.08842 -11.78576 -11.73748 -11.31727 -11.26471 -10.88707 -10.71765 -10.56021 -10.01588 -9.66938 -9.23848 -5.02327 -0.54571 0.36076 0.91153 1.21005 1.53575 1.89349 1.99576 2.30289 2.75151 3.22682 3.26685 3.42190 3.53482 3.58207 3.66139 3.77139 3.80940 3.87465 3.91619 3.99362 4.06811 4.15863 4.21507 4.27905 4.31277 4.35333 4.46002 4.47949 4.64198 4.67540 4.73304 4.75391 4.83350 4.85889 4.90779 4.98245 5.04595 5.08196 5.15829 5.31671 5.38710 5.44402 5.58058 5.59988 5.84668 6.35158 6.37733 6.69114 7.23195 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.075 3.925 2 N -0.612 5.612 3 C 0.128 3.872 4 C -0.123 4.123 5 H 0.095 0.905 6 C -0.165 4.165 7 C 0.075 3.925 8 H 0.081 0.919 9 O -0.560 6.560 10 C -0.121 4.121 11 C 0.547 3.453 12 O -0.541 6.541 13 C -0.217 4.217 14 C -0.015 4.015 15 C -0.073 4.073 16 C -0.100 4.100 17 C -0.094 4.094 18 C -0.061 4.061 19 C -0.079 4.079 20 O -0.536 6.536 21 Si 0.684 3.316 22 C -0.117 4.117 23 C -0.087 4.087 24 H 0.059 0.941 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.080 0.920 28 H 0.088 0.912 29 H 0.068 0.932 30 H 0.090 0.910 31 H 0.378 0.622 32 H 0.092 0.908 33 H 0.076 0.924 34 H 0.132 0.868 35 H 0.138 0.862 36 H 0.129 0.871 37 H 0.128 0.872 38 H 0.078 0.922 39 H 0.381 0.619 40 H -0.261 1.261 41 H -0.254 1.254 42 H 0.131 0.869 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.294 -1.370 1.532 4.760 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.345 5.345 3 C 0.005 3.995 4 C -0.142 4.142 5 H 0.113 0.887 6 C -0.202 4.202 7 C 0.016 3.984 8 H 0.099 0.901 9 O -0.366 6.366 10 C -0.159 4.159 11 C 0.338 3.662 12 O -0.420 6.420 13 C -0.238 4.238 14 C -0.034 4.034 15 C -0.073 4.073 16 C -0.118 4.118 17 C -0.112 4.112 18 C -0.061 4.061 19 C -0.188 4.188 20 O -0.343 6.343 21 Si 0.585 3.415 22 C -0.135 4.135 23 C -0.105 4.105 24 H 0.078 0.922 25 H 0.093 0.907 26 H 0.092 0.908 27 H 0.099 0.901 28 H 0.107 0.893 29 H 0.086 0.914 30 H 0.108 0.892 31 H 0.226 0.774 32 H 0.111 0.889 33 H 0.095 0.905 34 H 0.150 0.850 35 H 0.156 0.844 36 H 0.147 0.853 37 H 0.146 0.854 38 H 0.096 0.904 39 H 0.229 0.771 40 H -0.186 1.186 41 H -0.179 1.179 42 H 0.148 0.852 43 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -2.689 -1.519 1.591 3.474 hybrid contribution -1.651 -0.255 -1.258 2.091 sum -4.339 -1.774 0.333 4.700 Atomic orbital electron populations 1.21896 0.79265 1.03491 1.02152 1.47697 1.07095 1.05943 1.73719 1.21461 0.97997 0.84239 0.95791 1.22715 0.97287 0.96779 0.97464 0.88684 1.23784 0.97218 0.98294 1.00944 1.23329 0.96202 0.80776 0.98079 0.90106 1.86537 1.70853 1.23875 1.55318 1.23059 0.98346 0.95699 0.98832 1.18361 0.87250 0.84221 0.76323 1.90826 1.13571 1.87559 1.50048 1.23001 1.00597 0.92139 1.08037 1.22425 1.00419 0.90380 0.90199 1.19061 0.93239 0.92880 1.02135 1.21427 0.93287 0.98347 0.98700 1.20944 1.00303 0.91286 0.98659 1.19418 0.93169 0.93861 0.99639 1.24841 1.01566 1.03212 0.89227 1.86589 1.65236 1.44622 1.37855 0.94990 0.81183 0.75856 0.89492 1.20960 0.93286 0.98420 1.00803 1.21329 1.00296 0.91032 0.97862 0.92227 0.90747 0.90756 0.90121 0.89338 0.91372 0.89179 0.77434 0.88898 0.90508 0.85048 0.84446 0.85316 0.85391 0.90402 0.77129 1.18580 1.17909 0.85152 0.84757 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.20 10.15 59.85 0.61 0.41 16 2 N -0.61 -0.29 2.87 -183.22 -0.53 -0.82 16 3 C 0.13 0.05 5.24 -4.04 -0.02 0.02 16 4 C -0.12 -0.02 3.96 -89.81 -0.36 -0.38 16 5 H 0.09 0.16 8.14 -51.93 -0.42 -0.27 16 6 C -0.16 0.15 7.04 -25.92 -0.18 -0.03 16 7 C 0.08 0.01 5.21 -25.92 -0.14 -0.13 16 8 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 9 O -0.56 -0.60 13.67 -35.23 -0.48 -1.09 16 10 C -0.12 -0.06 7.47 -25.92 -0.19 -0.26 16 11 C 0.55 1.53 7.61 -12.96 -0.10 1.43 16 12 O -0.54 -3.48 15.81 5.19 0.08 -3.40 16 13 C -0.22 -0.12 8.61 -37.50 -0.32 -0.44 16 14 C -0.01 -0.01 9.46 -37.15 -0.35 -0.36 16 15 C -0.07 -0.04 5.87 -105.06 -0.62 -0.66 16 16 C -0.10 0.00 9.41 -39.11 -0.37 -0.37 16 17 C -0.09 -0.04 9.66 -39.65 -0.38 -0.43 16 18 C -0.06 -0.04 5.39 -104.50 -0.56 -0.61 16 19 C -0.08 0.04 2.79 36.01 0.10 0.14 16 20 O -0.54 -0.40 12.81 -35.23 -0.45 -0.85 16 21 Si 0.68 -0.84 29.84 -169.99 -5.07 -5.92 16 22 C -0.12 -0.02 8.65 -39.65 -0.34 -0.37 16 23 C -0.09 -0.01 9.80 -39.11 -0.38 -0.40 16 24 H 0.06 -0.20 8.14 -51.93 -0.42 -0.62 16 25 H 0.07 -0.26 7.64 -51.93 -0.40 -0.65 16 26 H 0.07 -0.27 6.09 -51.93 -0.32 -0.59 16 27 H 0.08 -0.09 7.77 -51.93 -0.40 -0.50 16 28 H 0.09 0.18 7.42 -51.93 -0.39 -0.21 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 31 H 0.38 -1.12 9.12 45.56 0.42 -0.70 16 32 H 0.09 0.07 8.10 -51.93 -0.42 -0.35 16 33 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.13 -0.26 4.22 -52.49 -0.22 -0.48 16 35 H 0.14 0.18 7.52 -52.49 -0.39 -0.22 16 36 H 0.13 -0.27 6.17 -52.48 -0.32 -0.60 16 37 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 38 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 39 H 0.38 -1.21 8.74 45.56 0.40 -0.82 16 40 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 41 H -0.25 -0.48 7.04 56.52 0.40 -0.08 16 42 H 0.13 -0.18 4.84 -52.49 -0.25 -0.43 16 43 H 0.13 -0.23 8.06 -52.48 -0.42 -0.65 16 LS Contribution 355.80 15.07 5.36 5.36 Total: 0.00 -9.07 355.80 -9.99 -19.06 By element: Atomic # 1 Polarization: -4.65 SS G_CDS: -5.29 Total: -9.94 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -3.61 Total: -2.41 kcal Atomic # 7 Polarization: -0.29 SS G_CDS: -0.53 Total: -0.82 kcal Atomic # 8 Polarization: -4.49 SS G_CDS: -0.85 Total: -5.34 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.07 Total: -5.92 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -9.07 -9.99 -19.06 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.931 kcal (2) G-P(sol) polarization free energy of solvation -9.072 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.985 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.058 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds