Wall clock time and date at job start Sat Mar 6 2021 17:14:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.46499 * 120.00049 * 2 1 4 4 C 1.52995 * 109.46935 * 269.99990 * 3 2 1 5 5 H 1.08996 * 112.85308 * 45.33326 * 4 3 2 6 6 C 1.53784 * 113.61660 * 176.53059 * 4 3 2 7 7 C 1.53777 * 87.08230 * 139.97735 * 6 4 3 8 8 H 1.09001 * 113.61415 * 89.20396 * 7 6 4 9 9 O 1.42896 * 113.61331 * 220.01790 * 7 6 4 10 10 C 1.53784 * 113.61339 * 274.13573 * 4 3 2 11 11 C 1.34771 * 119.99872 * 179.97438 * 2 1 3 12 12 O 1.21627 * 120.00408 * 184.53521 * 11 2 1 13 13 C 1.47298 * 120.00253 * 4.54164 * 11 2 1 14 14 C 1.40369 * 120.04756 * 130.46374 * 13 11 2 15 15 O 1.35664 * 120.13958 * 359.97438 * 14 13 11 16 16 C 1.38316 * 119.71961 * 179.72307 * 14 13 11 17 17 C 1.39569 * 119.81785 * 0.50745 * 16 14 13 18 18 C 1.47570 * 119.95723 * 179.77052 * 17 16 14 19 19 C 1.36101 * 125.94188 * 179.72500 * 18 17 16 20 20 C 1.40802 * 106.73143 * 180.25753 * 19 18 17 21 21 C 1.34833 * 107.04756 * 359.57368 * 20 19 18 22 22 C 1.50707 * 125.65149 * 180.15750 * 21 20 19 23 23 O 1.42897 * 109.47152 * 65.29513 * 22 21 20 24 24 Si 1.86297 * 109.46869 * 185.29317 * 22 21 20 25 25 O 1.34235 * 108.69633 * 0.42689 * 21 20 19 26 26 C 1.39959 * 120.08654 * 359.48668 * 17 16 14 27 27 C 1.36387 * 120.28070 * 0.25911 * 26 17 16 28 28 H 1.09005 * 109.47019 * 273.00235 * 1 2 3 29 29 H 1.08998 * 109.47133 * 32.99789 * 1 2 3 30 30 H 1.09001 * 109.47109 * 153.00006 * 1 2 3 31 31 H 1.09004 * 109.47408 * 29.99959 * 3 2 1 32 32 H 1.09004 * 109.47365 * 149.99726 * 3 2 1 33 33 H 1.08996 * 113.61376 * 254.53179 * 6 4 3 34 34 H 1.09005 * 113.61140 * 25.34836 * 6 4 3 35 35 H 0.96702 * 114.00318 * 180.02562 * 9 7 6 36 36 H 1.09001 * 113.61849 * 334.56723 * 10 4 3 37 37 H 1.09004 * 113.61602 * 105.47082 * 10 4 3 38 38 H 0.96701 * 113.99901 * 89.99886 * 15 14 13 39 39 H 1.07999 * 120.09386 * 180.27066 * 16 14 13 40 40 H 1.07997 * 126.63643 * 359.97438 * 19 18 17 41 41 H 1.08002 * 126.47663 * 179.73801 * 20 19 18 42 42 H 1.08994 * 109.46858 * 305.29394 * 22 21 20 43 43 H 0.96701 * 113.99933 * 59.99791 * 23 22 21 44 44 H 1.48497 * 109.99998 * 179.97438 * 24 22 21 45 45 H 1.48494 * 110.00417 * 301.31928 * 24 22 21 46 46 H 1.08006 * 119.86243 * 180.23532 * 26 17 16 47 47 H 1.08000 * 119.90870 * 179.97438 * 27 26 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.4525 1.7103 -1.4425 5 1 1.5716 1.6132 -2.0769 6 6 3.1444 3.0792 -1.5545 7 6 3.9737 2.4782 -2.7016 8 1 3.5101 2.5917 -3.6816 9 8 5.3454 2.8784 -2.6870 10 6 3.7244 1.1024 -2.0571 11 6 2.1389 -1.1672 0.0005 12 8 3.3523 -1.1689 0.0838 13 6 1.4059 -2.4409 -0.0999 14 6 1.8013 -3.4073 -1.0380 15 8 2.8586 -3.1713 -1.8547 16 6 1.1118 -4.6033 -1.1226 17 6 0.0218 -4.8368 -0.2828 18 6 -0.7193 -6.1097 -0.3739 19 6 -1.7915 -6.4660 0.3849 20 6 -2.1733 -7.7552 -0.0329 21 6 -1.3310 -8.1159 -1.0220 22 6 -1.3662 -9.4219 -1.7732 23 8 -2.5765 -9.5044 -2.5285 24 14 0.0934 -9.5140 -2.9272 25 8 -0.4521 -7.1213 -1.2228 26 6 -0.3657 -3.8678 0.6498 27 6 0.3147 -2.6893 0.7400 28 1 -0.3633 0.0538 1.0263 29 1 -0.3633 0.8619 -0.5597 30 1 -0.3633 -0.9157 -0.4666 31 1 1.6085 2.0284 0.5138 32 1 3.1500 1.1384 0.5139 33 1 2.4774 3.8809 -1.8714 34 1 3.7360 3.3424 -0.6777 35 1 5.8721 2.5039 -3.4063 36 1 4.4761 0.8237 -1.3186 37 1 3.5250 0.3106 -2.7792 38 1 3.7072 -3.4617 -1.4933 39 1 1.4136 -5.3529 -1.8391 40 1 -2.2565 -5.8759 1.1608 41 1 -2.9886 -8.3430 0.3623 42 1 -1.3225 -10.2494 -1.0653 43 1 -2.6826 -8.7976 -3.1799 44 1 0.0706 -10.7976 -3.6736 45 1 0.0627 -8.3730 -3.8771 46 1 -1.2074 -4.0539 1.3005 47 1 0.0103 -1.9455 1.4615 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12312124_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:14:04 Heat of formation + Delta-G solvation = -73.635808 kcal Electronic energy + Delta-G solvation = -31907.013858 eV Core-core repulsion = 27410.903342 eV Total energy + Delta-G solvation = -4496.110516 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -43.74127 -41.79493 -40.52081 -39.50011 -38.23081 -37.94048 -36.83362 -35.73850 -34.24451 -33.46985 -31.39400 -30.71380 -29.40366 -27.75438 -26.81938 -26.53528 -24.56960 -24.05224 -23.40269 -22.43075 -21.52987 -20.87107 -20.55047 -19.57643 -18.66036 -18.60447 -18.35297 -17.71223 -17.54453 -17.47622 -16.95898 -16.66383 -16.54264 -16.00011 -15.83848 -15.81004 -15.48175 -15.11376 -14.90344 -14.72229 -14.43446 -14.19842 -14.06298 -13.90179 -13.78711 -13.69833 -13.61509 -13.44942 -13.24248 -13.00293 -12.94703 -12.69752 -12.66629 -12.41534 -12.19687 -11.91228 -11.82118 -11.30134 -11.14230 -10.98737 -10.82470 -10.79193 -10.55981 -9.97551 -9.69742 -9.00620 -4.99558 -0.71481 0.11914 0.68669 1.12372 1.42940 1.44546 1.65382 1.69353 1.87726 1.97407 2.52761 2.99205 3.20614 3.24955 3.30719 3.41857 3.56833 3.62696 3.66160 3.80504 3.87118 3.94266 3.99821 4.01016 4.18914 4.26795 4.27870 4.35104 4.37525 4.43324 4.49336 4.61006 4.67379 4.71271 4.75337 4.78223 4.80468 4.84717 4.89130 4.90674 4.98267 5.07832 5.09287 5.16018 5.20236 5.37054 5.43077 5.49111 5.54447 5.96138 6.25489 6.31206 6.58310 6.81538 7.03203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.606 5.606 3 C 0.126 3.874 4 C -0.117 4.117 5 H 0.103 0.897 6 C -0.116 4.116 7 C 0.070 3.930 8 H 0.094 0.906 9 O -0.582 6.582 10 C -0.155 4.155 11 C 0.562 3.438 12 O -0.566 6.566 13 C -0.168 4.168 14 C 0.151 3.849 15 O -0.505 6.505 16 C -0.146 4.146 17 C 0.019 3.981 18 C 0.008 3.992 19 C -0.174 4.174 20 C -0.181 4.181 21 C -0.052 4.052 22 C -0.033 4.033 23 O -0.534 6.534 24 Si 0.763 3.237 25 O -0.177 6.177 26 C -0.104 4.104 27 C -0.058 4.058 28 H 0.084 0.916 29 H 0.088 0.912 30 H 0.078 0.922 31 H 0.109 0.891 32 H 0.065 0.935 33 H 0.092 0.908 34 H 0.083 0.917 35 H 0.392 0.608 36 H 0.069 0.931 37 H 0.052 0.948 38 H 0.411 0.589 39 H 0.138 0.862 40 H 0.181 0.819 41 H 0.167 0.833 42 H 0.157 0.843 43 H 0.390 0.610 44 H -0.281 1.281 45 H -0.296 1.296 46 H 0.169 0.831 47 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.473 0.566 2.835 6.190 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.337 5.337 3 C 0.004 3.996 4 C -0.136 4.136 5 H 0.121 0.879 6 C -0.154 4.154 7 C 0.011 3.989 8 H 0.112 0.888 9 O -0.390 6.390 10 C -0.193 4.193 11 C 0.351 3.649 12 O -0.445 6.445 13 C -0.171 4.171 14 C 0.105 3.895 15 O -0.318 6.318 16 C -0.165 4.165 17 C 0.019 3.981 18 C -0.042 4.042 19 C -0.192 4.192 20 C -0.200 4.200 21 C -0.102 4.102 22 C -0.142 4.142 23 O -0.343 6.343 24 Si 0.667 3.333 25 O -0.075 6.075 26 C -0.121 4.121 27 C -0.076 4.076 28 H 0.102 0.898 29 H 0.107 0.893 30 H 0.097 0.903 31 H 0.127 0.873 32 H 0.084 0.916 33 H 0.111 0.889 34 H 0.102 0.898 35 H 0.242 0.758 36 H 0.087 0.913 37 H 0.071 0.929 38 H 0.270 0.730 39 H 0.156 0.844 40 H 0.199 0.801 41 H 0.184 0.816 42 H 0.174 0.826 43 H 0.239 0.761 44 H -0.207 1.207 45 H -0.223 1.223 46 H 0.186 0.814 47 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -5.044 0.556 2.365 5.599 hybrid contribution -0.176 -0.207 -0.999 1.036 sum -5.220 0.349 1.366 5.407 Atomic orbital electron populations 1.22307 0.77132 1.04624 1.03862 1.47826 1.08443 1.05159 1.72311 1.21527 0.97701 0.84469 0.95915 1.22684 0.97421 0.96231 0.97261 0.87890 1.23017 0.97521 0.96588 0.98307 1.23548 0.82268 0.94239 0.98801 0.88791 1.86476 1.21674 1.74750 1.56051 1.23594 0.98317 0.97151 1.00218 1.18311 0.86683 0.84289 0.75620 1.90775 1.15107 1.87742 1.50914 1.20451 1.00510 0.95807 1.00360 1.18315 0.90308 0.91370 0.89520 1.84654 1.18011 1.85020 1.44106 1.21526 0.97217 0.96757 1.00964 1.17895 0.93653 0.90020 0.96553 1.20558 0.99251 0.89145 0.95224 1.22233 0.97182 0.97106 1.02714 1.21840 1.02416 0.97262 0.98500 1.23148 0.93253 0.91962 1.01834 1.24458 0.96840 0.92419 1.00523 1.86638 1.38990 1.54525 1.54106 0.93635 0.82879 0.76901 0.79899 1.83934 1.48857 1.23455 1.51225 1.21025 1.01433 0.91710 0.97978 1.21162 0.91584 0.97824 0.97057 0.89758 0.89329 0.90340 0.87310 0.91601 0.88948 0.89805 0.75821 0.91255 0.92941 0.72950 0.84407 0.80134 0.81572 0.82567 0.76053 1.20736 1.22263 0.81360 0.81627 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.46 9.09 127.77 1.16 0.70 16 2 N -0.61 -0.07 2.87 -850.79 -2.44 -2.52 16 3 C 0.13 0.00 5.28 86.38 0.46 0.45 16 4 C -0.12 -0.02 3.96 -10.27 -0.04 -0.06 16 5 H 0.10 -0.17 8.14 -2.39 -0.02 -0.19 16 6 C -0.12 -0.03 7.48 31.12 0.23 0.20 16 7 C 0.07 0.19 5.21 31.18 0.16 0.35 16 8 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 9 O -0.58 -3.22 13.67 -148.98 -2.04 -5.26 16 10 C -0.15 -0.82 7.10 31.18 0.22 -0.60 16 11 C 0.56 3.42 6.92 86.63 0.60 4.02 16 12 O -0.57 -7.61 15.56 4.60 0.07 -7.53 16 13 C -0.17 -0.45 4.90 -19.97 -0.10 -0.55 16 14 C 0.15 0.70 6.69 22.81 0.15 0.85 16 15 O -0.50 -3.18 12.55 -81.08 -1.02 -4.20 16 16 C -0.15 -0.42 9.65 22.61 0.22 -0.20 16 17 C 0.02 0.00 5.87 -20.08 -0.12 -0.11 16 18 C 0.01 0.01 7.02 24.24 0.17 0.18 16 19 C -0.17 0.32 10.26 22.40 0.23 0.55 16 20 C -0.18 0.11 10.78 22.11 0.24 0.35 16 21 C -0.05 -0.03 6.21 24.91 0.15 0.13 16 22 C -0.03 0.06 2.98 71.24 0.21 0.27 16 23 O -0.53 -0.26 12.88 -148.98 -1.92 -2.17 16 24 Si 0.76 -0.70 32.11 68.60 2.20 1.50 16 25 O -0.18 -0.52 8.79 -6.03 -0.05 -0.57 16 26 C -0.10 0.49 9.48 22.25 0.21 0.70 16 27 C -0.06 0.23 7.54 22.25 0.17 0.40 16 28 H 0.08 -0.97 7.56 -2.38 -0.02 -0.99 16 29 H 0.09 -0.88 8.09 -2.39 -0.02 -0.90 16 30 H 0.08 -0.54 5.69 -2.39 -0.01 -0.55 16 31 H 0.11 -0.60 8.07 -2.38 -0.02 -0.62 16 32 H 0.07 0.35 7.10 -2.39 -0.02 0.33 16 33 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 34 H 0.08 0.19 8.10 -2.38 -0.02 0.17 16 35 H 0.39 -0.82 9.12 -74.06 -0.68 -1.49 16 36 H 0.07 0.75 7.77 -2.39 -0.02 0.73 16 37 H 0.05 0.39 8.14 -2.38 -0.02 0.37 16 38 H 0.41 0.29 9.06 -74.06 -0.67 -0.38 16 39 H 0.14 0.38 7.89 -2.91 -0.02 0.36 16 40 H 0.18 -1.42 7.24 -2.91 -0.02 -1.45 16 41 H 0.17 -0.56 8.06 -2.91 -0.02 -0.58 16 42 H 0.16 -0.90 7.96 -2.39 -0.02 -0.92 16 43 H 0.39 -1.69 8.70 -74.06 -0.64 -2.34 16 44 H -0.28 -1.26 7.11 99.48 0.71 -0.55 16 45 H -0.30 -1.70 7.11 99.48 0.71 -0.99 16 46 H 0.17 -1.84 6.95 -2.91 -0.02 -1.86 16 47 H 0.17 -1.56 6.59 -2.91 -0.02 -1.58 16 Total: 0.00 -25.17 395.59 -1.77 -26.94 By element: Atomic # 1 Polarization: -12.90 SS G_CDS: -0.91 Total: -13.81 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: 4.33 Total: 7.62 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -2.44 Total: -2.52 kcal Atomic # 8 Polarization: -14.78 SS G_CDS: -4.95 Total: -19.74 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: 2.20 Total: 1.50 kcal Total: -25.17 -1.77 -26.94 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.693 kcal (2) G-P(sol) polarization free energy of solvation -25.173 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.867 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.942 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds