Wall clock time and date at job start Sat Mar 6 2021 17:14:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.46496 * 119.99885 * 2 1 4 4 C 1.52996 * 109.47329 * 90.00043 * 3 2 1 5 5 H 1.09003 * 112.84556 * 43.79897 * 4 3 2 6 6 C 1.53776 * 113.61687 * 174.99880 * 4 3 2 7 7 C 1.53779 * 87.08187 * 139.98288 * 6 4 3 8 8 H 1.09004 * 113.61660 * 89.20141 * 7 6 4 9 9 O 1.42900 * 113.61712 * 220.02063 * 7 6 4 10 10 C 1.53781 * 87.08353 * 334.56739 * 7 6 4 11 11 C 1.34780 * 119.99811 * 180.02562 * 2 1 3 12 12 O 1.21649 * 119.99652 * 186.32592 * 11 2 1 13 13 C 1.47058 * 120.00206 * 6.32953 * 11 2 1 14 14 C 1.35857 * 125.42641 * 188.15041 * 13 11 2 15 15 C 1.41589 * 107.73030 * 179.97438 * 14 13 11 16 16 C 1.40068 * 133.38563 * 180.02562 * 15 14 13 17 17 C 1.36477 * 119.82751 * 179.97438 * 16 15 14 18 18 C 1.38898 * 120.62051 * 0.02562 * 17 16 15 19 19 C 1.50695 * 119.67589 * 179.97438 * 18 17 16 20 20 O 1.42897 * 109.47268 * 120.00224 * 19 18 17 21 21 Si 1.86301 * 109.47288 * 0.02562 * 19 18 17 22 22 C 1.37715 * 120.64540 * 0.02562 * 18 17 16 23 23 C 1.39185 * 119.81004 * 359.95653 * 22 18 17 24 24 N 1.37483 * 133.18722 * 180.33962 * 23 22 18 25 25 H 1.09003 * 109.47086 * 95.81914 * 1 2 3 26 26 H 1.08994 * 109.47134 * 215.81513 * 1 2 3 27 27 H 1.08995 * 109.47110 * 335.81872 * 1 2 3 28 28 H 1.09004 * 109.47273 * 330.00230 * 3 2 1 29 29 H 1.09005 * 109.47350 * 209.99909 * 3 2 1 30 30 H 1.09005 * 113.61374 * 254.53083 * 6 4 3 31 31 H 1.08994 * 113.61617 * 25.34920 * 6 4 3 32 32 H 0.96693 * 114.00469 * 179.97438 * 9 7 6 33 33 H 1.08999 * 113.61204 * 270.88803 * 10 7 6 34 34 H 1.08999 * 113.61648 * 139.97673 * 10 7 6 35 35 H 1.07997 * 126.13719 * 359.95752 * 14 13 11 36 36 H 1.07993 * 120.08132 * 359.97438 * 16 15 14 37 37 H 1.07995 * 119.68737 * 179.97438 * 17 16 15 38 38 H 1.09001 * 109.47349 * 240.00395 * 19 18 17 39 39 H 0.96705 * 113.99722 * 300.00593 * 20 19 18 40 40 H 1.48499 * 110.00102 * 179.97438 * 21 19 18 41 41 H 1.48501 * 109.99878 * 301.31872 * 21 19 18 42 42 H 1.07995 * 120.09240 * 179.97438 * 22 18 17 43 43 H 0.97005 * 125.60486 * 359.97167 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4525 1.7104 1.4424 5 1 2.7834 0.8930 2.0831 6 6 3.3232 2.9729 1.5553 7 6 2.3902 3.4192 2.6934 8 1 2.7041 3.0707 3.6774 9 8 2.0861 4.8153 2.6702 10 6 1.3071 2.5419 2.0438 11 6 2.1389 -1.1673 -0.0005 12 8 3.3498 -1.1705 0.1156 13 6 1.4103 -2.4369 -0.1415 14 6 1.9513 -3.6751 -0.0008 15 6 0.9209 -4.6226 -0.2136 16 6 0.8831 -6.0227 -0.1982 17 6 -0.2908 -6.6728 -0.4473 18 6 -1.4513 -5.9590 -0.7172 19 6 -2.7357 -6.6986 -0.9899 20 8 -3.7153 -6.3262 -0.0185 21 14 -2.4290 -8.5335 -0.8897 22 6 -1.4396 -4.5821 -0.7391 23 6 -0.2548 -3.8962 -0.4878 24 7 0.0659 -2.5604 -0.4342 25 1 -0.3633 -0.1042 -1.0224 26 1 -0.3633 -0.8333 0.6013 27 1 -0.3633 0.9374 0.4209 28 1 1.6084 2.0284 -0.5138 29 1 3.1499 1.1384 -0.5138 30 1 4.3438 2.7717 1.8809 31 1 3.2784 3.6144 0.6753 32 1 1.4994 5.1019 3.3833 33 1 0.7100 3.0663 1.2977 34 1 0.7001 1.9928 2.7636 35 1 2.9825 -3.8970 0.2313 36 1 1.7804 -6.5862 0.0103 37 1 -0.3173 -7.7524 -0.4352 38 1 -3.0970 -6.4442 -1.9863 39 1 -3.4602 -6.5238 0.8931 40 1 -3.6882 -9.2742 -1.1562 41 1 -1.3888 -8.9290 -1.8730 42 1 -2.3470 -4.0361 -0.9504 43 1 -0.5504 -1.8254 -0.5790 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_13158378.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:14:15 Heat of formation + Delta-G solvation = -2.840768 kcal Electronic energy + Delta-G solvation = -26042.239885 eV Core-core repulsion = 22249.363885 eV Total energy + Delta-G solvation = -3792.876000 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.83440 -41.09523 -40.02097 -38.94062 -37.14186 -36.88220 -35.75803 -33.30300 -31.47051 -30.57103 -29.69980 -28.09475 -26.79147 -26.51173 -24.66026 -23.51421 -22.44491 -21.91298 -20.99926 -20.60883 -18.70021 -18.59198 -18.57479 -17.95090 -17.26155 -16.94294 -16.76756 -16.37509 -16.20693 -15.73294 -15.53767 -15.39010 -15.10341 -14.84866 -14.72533 -14.54632 -14.50331 -14.32822 -14.07617 -13.61075 -13.48860 -13.28328 -13.13736 -12.86956 -12.58908 -12.49253 -12.42571 -11.97433 -11.88038 -11.64733 -11.38090 -11.23265 -10.93362 -10.86176 -10.46741 -9.92826 -9.31571 -8.81213 -5.01970 -0.33897 0.52207 0.99226 1.28747 1.60157 1.65165 1.88905 1.99672 2.23771 2.77921 3.14943 3.23177 3.41591 3.44405 3.48432 3.62099 3.63957 3.70455 3.72774 3.83666 3.91891 4.00526 4.13378 4.19773 4.25741 4.28555 4.31759 4.41919 4.46949 4.54060 4.60861 4.64108 4.66475 4.73062 4.87989 4.89327 4.96118 5.00185 5.17325 5.33384 5.38728 5.42024 5.52876 5.61736 5.96788 6.08049 6.25741 6.54326 6.63478 6.92377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.613 5.613 3 C 0.129 3.871 4 C -0.124 4.124 5 H 0.098 0.902 6 C -0.121 4.121 7 C 0.076 3.924 8 H 0.082 0.918 9 O -0.560 6.560 10 C -0.166 4.166 11 C 0.584 3.416 12 O -0.513 6.513 13 C 0.014 3.986 14 C -0.101 4.101 15 C -0.116 4.116 16 C -0.051 4.051 17 C -0.147 4.147 18 C -0.088 4.088 19 C -0.068 4.068 20 O -0.541 6.541 21 Si 0.693 3.307 22 C -0.104 4.104 23 C 0.110 3.890 24 N -0.584 5.584 25 H 0.062 0.938 26 H 0.077 0.923 27 H 0.090 0.910 28 H 0.084 0.916 29 H 0.091 0.909 30 H 0.078 0.922 31 H 0.093 0.907 32 H 0.379 0.621 33 H 0.090 0.910 34 H 0.068 0.932 35 H 0.158 0.842 36 H 0.132 0.868 37 H 0.129 0.871 38 H 0.114 0.886 39 H 0.380 0.620 40 H -0.256 1.256 41 H -0.257 1.257 42 H 0.126 0.874 43 H 0.422 0.578 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.035 0.333 2.796 4.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.346 5.346 3 C 0.007 3.993 4 C -0.144 4.144 5 H 0.116 0.884 6 C -0.159 4.159 7 C 0.017 3.983 8 H 0.100 0.900 9 O -0.366 6.366 10 C -0.204 4.204 11 C 0.372 3.628 12 O -0.388 6.388 13 C -0.094 4.094 14 C -0.128 4.128 15 C -0.121 4.121 16 C -0.069 4.069 17 C -0.165 4.165 18 C -0.090 4.090 19 C -0.179 4.179 20 O -0.346 6.346 21 Si 0.595 3.405 22 C -0.125 4.125 23 C 0.000 4.000 24 N -0.196 5.196 25 H 0.080 0.920 26 H 0.095 0.905 27 H 0.108 0.892 28 H 0.102 0.898 29 H 0.109 0.891 30 H 0.096 0.904 31 H 0.111 0.889 32 H 0.226 0.774 33 H 0.108 0.892 34 H 0.087 0.913 35 H 0.175 0.825 36 H 0.150 0.850 37 H 0.146 0.854 38 H 0.131 0.869 39 H 0.227 0.773 40 H -0.181 1.181 41 H -0.182 1.182 42 H 0.144 0.856 43 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges -2.387 -0.055 1.341 2.738 hybrid contribution -0.832 0.956 0.066 1.269 sum -3.219 0.901 1.408 3.627 Atomic orbital electron populations 1.22215 0.80154 1.04620 1.01713 1.47716 1.06661 1.06177 1.74083 1.21554 0.97917 0.83592 0.96205 1.22730 0.97444 0.96977 0.97221 0.88408 1.23055 0.98431 0.95535 0.98880 1.23313 0.96058 0.80802 0.98119 0.90003 1.86535 1.70835 1.23869 1.55339 1.23798 0.97246 0.98345 1.00985 1.17290 0.86689 0.81957 0.76858 1.90879 1.12735 1.86254 1.48926 1.20050 0.83556 0.95078 1.10763 1.20964 0.99582 0.89221 1.02999 1.18244 0.92975 0.93720 1.07163 1.20385 0.98109 0.91692 0.96741 1.20481 0.92554 0.99257 1.04225 1.20028 0.95433 0.93272 1.00310 1.25076 0.87849 1.09982 0.94986 1.86497 1.42580 1.86602 1.18959 0.94551 0.80496 0.74834 0.90632 1.19845 0.95068 0.93314 1.04240 1.18410 0.95751 0.83498 1.02390 1.43044 1.08763 1.06511 1.61328 0.91961 0.90462 0.89159 0.89786 0.89084 0.90373 0.88881 0.77376 0.89199 0.91346 0.82453 0.85045 0.85371 0.86887 0.77290 1.18143 1.18215 0.85598 0.73243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.21 8.78 59.85 0.53 0.32 16 2 N -0.61 0.33 2.87 -182.99 -0.53 -0.19 16 3 C 0.13 -0.11 5.17 -4.05 -0.02 -0.13 16 4 C -0.12 0.10 3.96 -89.81 -0.36 -0.25 16 5 H 0.10 0.07 8.14 -51.93 -0.42 -0.36 16 6 C -0.12 0.04 7.47 -25.92 -0.19 -0.15 16 7 C 0.08 -0.05 5.21 -25.92 -0.14 -0.19 16 8 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 9 O -0.56 -0.25 13.67 -35.23 -0.48 -0.73 16 10 C -0.17 0.30 7.15 -25.92 -0.19 0.11 16 11 C 0.58 1.39 7.63 -12.68 -0.10 1.29 16 12 O -0.51 -2.90 16.50 5.23 0.09 -2.82 16 13 C 0.01 0.02 6.56 -82.30 -0.54 -0.52 16 14 C -0.10 -0.21 10.54 -39.16 -0.41 -0.63 16 15 C -0.12 -0.20 6.16 -106.93 -0.66 -0.86 16 16 C -0.05 -0.01 10.06 -39.53 -0.40 -0.41 16 17 C -0.15 0.06 8.59 -39.97 -0.34 -0.29 16 18 C -0.09 0.00 5.40 -104.57 -0.56 -0.56 16 19 C -0.07 0.04 2.81 36.00 0.10 0.14 16 20 O -0.54 0.18 12.76 -35.23 -0.45 -0.27 16 21 Si 0.69 -0.91 29.75 -169.99 -5.06 -5.97 16 22 C -0.10 -0.04 9.61 -39.42 -0.38 -0.42 16 23 C 0.11 0.12 7.25 -83.97 -0.61 -0.49 16 24 N -0.58 0.12 5.13 -7.36 -0.04 0.08 16 25 H 0.06 -0.30 7.40 -51.93 -0.38 -0.69 16 26 H 0.08 -0.29 5.69 -51.93 -0.30 -0.59 16 27 H 0.09 -0.44 7.71 -51.93 -0.40 -0.84 16 28 H 0.08 -0.21 7.77 -51.93 -0.40 -0.61 16 29 H 0.09 0.06 7.52 -51.93 -0.39 -0.33 16 30 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.09 -0.01 8.10 -51.93 -0.42 -0.43 16 32 H 0.38 -1.34 9.12 45.56 0.42 -0.92 16 33 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16 34 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.16 0.22 8.06 -52.49 -0.42 -0.20 16 36 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 37 H 0.13 -0.29 4.82 -52.49 -0.25 -0.54 16 38 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 39 H 0.38 -1.55 8.70 45.56 0.40 -1.15 16 40 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 41 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 42 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 43 H 0.42 -1.17 4.83 -40.82 -0.20 -1.37 16 LS Contribution 351.50 15.07 5.30 5.30 Total: 0.00 -8.99 351.50 -10.35 -19.34 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -4.91 Total: -11.72 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -4.27 Total: -3.02 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.56 Total: -0.11 kcal Atomic # 8 Polarization: -2.97 SS G_CDS: -0.84 Total: -3.82 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.06 Total: -5.97 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -8.99 -10.35 -19.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_13158378.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.498 kcal (2) G-P(sol) polarization free energy of solvation -8.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.507 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.348 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.339 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.841 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds