Wall clock time and date at job start Sat Mar 6 2021 17:14:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.46497 * 119.99745 * 2 1 4 4 C 1.53003 * 109.47315 * 90.00147 * 3 2 1 5 5 H 1.08997 * 112.84858 * 43.79314 * 4 3 2 6 6 C 1.53780 * 113.61748 * 174.99956 * 4 3 2 7 7 C 1.53783 * 87.17374 * 140.01869 * 6 4 3 8 8 H 1.08997 * 113.60894 * 89.15762 * 7 6 4 9 9 O 1.42893 * 113.61062 * 220.05825 * 7 6 4 10 10 C 1.53784 * 113.68772 * 272.53655 * 4 3 2 11 11 C 1.34773 * 119.99663 * 179.97438 * 2 1 3 12 12 O 1.21588 * 119.99620 * 185.20047 * 11 2 1 13 13 C 1.47557 * 120.00396 * 5.19972 * 11 2 1 14 14 C 1.40213 * 120.11921 * 202.65469 * 13 11 2 15 15 O 1.35647 * 120.00564 * 359.95409 * 14 13 11 16 16 C 1.38820 * 119.99305 * 179.97438 * 14 13 11 17 17 C 1.37776 * 120.24593 * 359.97438 * 16 14 13 18 18 C 1.39847 * 120.24336 * 359.97438 * 17 16 14 19 19 C 1.47816 * 119.99868 * 180.02562 * 18 17 16 20 20 C 1.35930 * 125.92999 * 359.71760 * 19 18 17 21 21 C 1.40971 * 106.74317 * 179.85491 * 20 19 18 22 22 C 1.34707 * 107.02511 * 0.40697 * 21 20 19 23 23 C 1.50699 * 125.66353 * 179.75098 * 22 21 20 24 24 O 1.42901 * 109.47629 * 64.97551 * 23 22 21 25 25 Si 1.86302 * 109.47064 * 184.97248 * 23 22 21 26 26 O 1.34338 * 108.67315 * 359.74834 * 22 21 20 27 27 C 1.39176 * 119.99796 * 359.74715 * 18 17 16 28 28 H 1.09005 * 109.47277 * 84.04765 * 1 2 3 29 29 H 1.09000 * 109.47340 * 204.04379 * 1 2 3 30 30 H 1.08997 * 109.47317 * 324.04885 * 1 2 3 31 31 H 1.09000 * 109.47435 * 329.99889 * 3 2 1 32 32 H 1.09000 * 109.46770 * 209.99690 * 3 2 1 33 33 H 1.09004 * 113.60893 * 254.61310 * 6 4 3 34 34 H 1.09004 * 113.61294 * 25.42884 * 6 4 3 35 35 H 0.96705 * 113.99798 * 180.02562 * 9 7 6 36 36 H 1.09002 * 113.61385 * 334.55102 * 10 4 3 37 37 H 1.09000 * 113.62064 * 105.37250 * 10 4 3 38 38 H 0.96700 * 113.99382 * 90.00413 * 15 14 13 39 39 H 1.07998 * 119.88335 * 180.02562 * 16 14 13 40 40 H 1.08005 * 119.87872 * 179.97438 * 17 16 14 41 41 H 1.07995 * 126.63303 * 359.97438 * 20 19 18 42 42 H 1.08005 * 126.49046 * 180.15907 * 21 20 19 43 43 H 1.09001 * 109.47547 * 304.97344 * 23 22 21 44 44 H 0.96696 * 114.00451 * 179.97438 * 24 23 22 45 45 H 1.48497 * 110.00033 * 299.99820 * 25 23 22 46 46 H 1.48495 * 109.99889 * 61.31975 * 25 23 22 47 47 H 1.08004 * 120.11824 * 180.27373 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2687 0.0000 4 6 2.4525 1.7105 1.4425 5 1 2.7833 0.8931 2.0832 6 6 3.3231 2.9730 1.5554 7 6 2.3921 3.4209 2.6945 8 1 2.7065 3.0720 3.6780 9 8 2.0887 4.8170 2.6702 10 6 1.3077 2.5413 2.0458 11 6 2.1388 -1.1672 0.0005 12 8 3.3509 -1.1693 0.0960 13 6 1.4056 -2.4425 -0.1147 14 6 1.9866 -3.6323 0.3465 15 8 3.2253 -3.6126 0.8991 16 6 1.2942 -4.8306 0.2373 17 6 0.0358 -4.8564 -0.3229 18 6 -0.5537 -3.6755 -0.7853 19 6 -1.9043 -3.7093 -1.3850 20 6 -2.6758 -4.8161 -1.5510 21 6 -3.8758 -4.3879 -2.1544 22 6 -3.7743 -3.0566 -2.3330 23 6 -4.8241 -2.1706 -2.9526 24 8 -5.9873 -2.1580 -2.1225 25 14 -4.1581 -0.4383 -3.1145 26 8 -2.5818 -2.6498 -1.8669 27 6 0.1290 -2.4677 -0.6756 28 1 -0.3634 0.1066 -1.0222 29 1 -0.3634 -0.9385 0.4187 30 1 -0.3634 0.8319 0.6033 31 1 1.6084 2.0284 -0.5138 32 1 3.1499 1.1384 -0.5138 33 1 4.3442 2.7716 1.8796 34 1 3.2772 3.6152 0.6758 35 1 1.5037 5.1048 3.3845 36 1 0.7096 3.0663 1.3009 37 1 0.7006 1.9912 2.7648 38 1 3.2268 -3.4727 1.8559 39 1 1.7433 -5.7459 0.5936 40 1 -0.4974 -5.7920 -0.4054 41 1 -2.4199 -5.8277 -1.2726 42 1 -4.7158 -5.0101 -2.4260 43 1 -5.0860 -2.5529 -3.9392 44 1 -6.7058 -1.6061 -2.4605 45 1 -3.7973 0.0943 -1.7760 46 1 -2.9669 -0.4330 -4.0012 47 1 -0.3263 -1.5539 -1.0280 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_13259648.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:14:22 Heat of formation + Delta-G solvation = -49.983284 kcal Electronic energy + Delta-G solvation = -32456.076256 eV Core-core repulsion = 27960.991390 eV Total energy + Delta-G solvation = -4495.084866 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.75436 -41.83837 -40.53515 -39.46003 -38.18626 -37.88674 -36.77619 -35.74957 -34.26662 -32.92078 -32.71544 -30.20338 -29.55853 -27.87100 -26.74729 -26.34372 -25.06390 -23.86938 -23.34682 -22.58816 -21.53347 -20.81506 -20.55513 -19.30179 -18.77924 -18.68733 -18.53357 -17.92922 -17.44171 -17.13651 -16.79747 -16.69285 -16.49228 -16.19473 -15.95616 -15.84627 -15.37121 -15.16919 -14.93776 -14.62923 -14.44617 -14.39246 -14.15464 -14.07665 -13.93714 -13.75410 -13.59353 -13.48036 -13.18931 -13.12375 -12.77074 -12.75563 -12.55638 -12.35000 -12.14541 -11.82209 -11.77455 -11.31894 -11.09481 -10.87290 -10.71971 -10.65628 -10.43674 -10.20953 -9.71935 -8.92902 -5.18656 -0.59001 -0.22880 0.71780 1.05029 1.37866 1.55088 1.58455 1.82064 1.89873 1.90934 2.54658 3.01166 3.13557 3.19591 3.27383 3.47839 3.49987 3.55317 3.59367 3.72428 3.77475 3.86854 3.88674 3.93127 3.94906 4.11582 4.14970 4.21584 4.24198 4.33519 4.37981 4.53106 4.56915 4.57504 4.65099 4.69491 4.72406 4.73480 4.78969 4.81012 4.94779 4.98516 5.02722 5.10776 5.12567 5.29663 5.37644 5.41600 5.49955 5.95968 6.24637 6.39139 6.59736 6.66811 7.13927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.611 5.611 3 C 0.129 3.871 4 C -0.122 4.122 5 H 0.096 0.904 6 C -0.121 4.121 7 C 0.076 3.924 8 H 0.081 0.919 9 O -0.560 6.560 10 C -0.166 4.166 11 C 0.557 3.443 12 O -0.509 6.509 13 C -0.163 4.163 14 C 0.177 3.823 15 O -0.474 6.474 16 C -0.148 4.148 17 C -0.053 4.053 18 C -0.037 4.037 19 C 0.035 3.965 20 C -0.187 4.187 21 C -0.164 4.164 22 C -0.009 4.009 23 C -0.034 4.034 24 O -0.543 6.543 25 Si 0.703 3.297 26 O -0.173 6.173 27 C -0.077 4.077 28 H 0.061 0.939 29 H 0.088 0.912 30 H 0.075 0.925 31 H 0.082 0.918 32 H 0.089 0.911 33 H 0.077 0.923 34 H 0.092 0.908 35 H 0.379 0.621 36 H 0.089 0.911 37 H 0.067 0.933 38 H 0.396 0.604 39 H 0.146 0.854 40 H 0.140 0.860 41 H 0.157 0.843 42 H 0.156 0.844 43 H 0.095 0.905 44 H 0.390 0.610 45 H -0.247 1.247 46 H -0.252 1.252 47 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.519 0.419 0.169 7.533 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.344 5.344 3 C 0.007 3.993 4 C -0.142 4.142 5 H 0.114 0.886 6 C -0.159 4.159 7 C 0.017 3.983 8 H 0.099 0.901 9 O -0.365 6.365 10 C -0.203 4.203 11 C 0.346 3.654 12 O -0.385 6.385 13 C -0.166 4.166 14 C 0.131 3.869 15 O -0.285 6.285 16 C -0.167 4.167 17 C -0.071 4.071 18 C -0.037 4.037 19 C -0.014 4.014 20 C -0.206 4.206 21 C -0.183 4.183 22 C -0.058 4.058 23 C -0.144 4.144 24 O -0.350 6.350 25 Si 0.602 3.398 26 O -0.071 6.071 27 C -0.095 4.095 28 H 0.079 0.921 29 H 0.106 0.894 30 H 0.093 0.907 31 H 0.100 0.900 32 H 0.108 0.892 33 H 0.095 0.905 34 H 0.111 0.889 35 H 0.226 0.774 36 H 0.108 0.892 37 H 0.086 0.914 38 H 0.254 0.746 39 H 0.164 0.836 40 H 0.158 0.842 41 H 0.174 0.826 42 H 0.174 0.826 43 H 0.113 0.887 44 H 0.239 0.761 45 H -0.171 1.171 46 H -0.176 1.176 47 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -5.112 0.751 -0.391 5.182 hybrid contribution -0.725 -0.815 1.013 1.488 sum -5.836 -0.064 0.622 5.870 Atomic orbital electron populations 1.22512 0.79873 1.04238 1.01711 1.47707 1.06800 1.05935 1.74003 1.21492 0.97856 0.83920 0.96023 1.22703 0.97342 0.96835 0.97316 0.88604 1.23052 0.98362 0.95613 0.98847 1.23340 0.96103 0.80782 0.98062 0.90071 1.86537 1.70967 1.23842 1.55186 1.23825 0.97229 0.98322 1.00972 1.18086 0.87115 0.83069 0.77141 1.90858 1.12985 1.86732 1.47881 1.20227 0.95295 0.94022 1.07078 1.18577 0.83904 0.90618 0.93850 1.84817 1.22543 1.94434 1.26744 1.21375 0.94387 0.98321 1.02584 1.21132 0.94288 0.97234 0.94487 1.17632 0.90073 0.94099 1.01912 1.20300 0.93363 0.85155 1.02620 1.21856 0.94409 0.99274 1.05016 1.21542 0.99372 0.94024 1.03346 1.21354 0.86031 0.94064 1.04385 1.23776 0.86925 1.09366 0.94353 1.86466 1.25331 1.73325 1.49924 0.95242 0.84326 0.77589 0.82622 1.83930 1.26159 1.35962 1.61083 1.22230 0.92643 0.98746 0.95881 0.92056 0.89354 0.90671 0.90003 0.89247 0.90451 0.88910 0.77408 0.89214 0.91390 0.74611 0.83598 0.84188 0.82563 0.82594 0.88731 0.76066 1.17148 1.17613 0.82714 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.04 8.68 59.85 0.52 0.48 16 2 N -0.61 -0.88 2.87 -182.80 -0.53 -1.41 16 3 C 0.13 0.10 5.23 -4.04 -0.02 0.08 16 4 C -0.12 -0.04 3.96 -89.81 -0.36 -0.39 16 5 H 0.10 0.15 8.14 -51.93 -0.42 -0.27 16 6 C -0.12 -0.07 7.47 -25.92 -0.19 -0.26 16 7 C 0.08 0.01 5.22 -25.82 -0.13 -0.13 16 8 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 9 O -0.56 -0.62 13.67 -35.23 -0.48 -1.11 16 10 C -0.17 0.11 7.00 -25.82 -0.18 -0.07 16 11 C 0.56 2.20 7.45 -12.46 -0.09 2.10 16 12 O -0.51 -3.66 15.12 -15.33 -0.23 -3.89 16 13 C -0.16 -0.44 5.56 -104.90 -0.58 -1.02 16 14 C 0.18 0.39 6.69 -38.62 -0.26 0.13 16 15 O -0.47 -1.23 11.80 -39.26 -0.46 -1.69 16 16 C -0.15 -0.02 9.96 -39.54 -0.39 -0.41 16 17 C -0.05 0.01 9.54 -39.15 -0.37 -0.37 16 18 C -0.04 -0.05 5.87 -105.03 -0.62 -0.67 16 19 C 0.04 0.08 7.03 -36.49 -0.26 -0.17 16 20 C -0.19 -0.24 10.26 -39.38 -0.40 -0.64 16 21 C -0.16 -0.27 10.78 -39.80 -0.43 -0.70 16 22 C -0.01 -0.02 6.24 -35.56 -0.22 -0.24 16 23 C -0.03 0.03 2.97 36.01 0.11 0.14 16 24 O -0.54 0.59 12.86 -35.23 -0.45 0.13 16 25 Si 0.70 -1.22 32.11 -169.99 -5.46 -6.68 16 26 O -0.17 -0.56 8.80 4.58 0.04 -0.52 16 27 C -0.08 -0.13 7.21 -38.78 -0.28 -0.41 16 28 H 0.06 -0.07 7.19 -51.93 -0.37 -0.44 16 29 H 0.09 -0.05 4.97 -51.93 -0.26 -0.31 16 30 H 0.07 -0.14 7.64 -51.93 -0.40 -0.54 16 31 H 0.08 -0.06 7.78 -51.93 -0.40 -0.46 16 32 H 0.09 0.21 7.50 -51.93 -0.39 -0.18 16 33 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.09 0.08 8.10 -51.93 -0.42 -0.34 16 35 H 0.38 -1.11 9.12 45.56 0.42 -0.69 16 36 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 37 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.40 -0.69 9.06 45.56 0.41 -0.28 16 39 H 0.15 -0.27 8.06 -52.49 -0.42 -0.69 16 40 H 0.14 -0.35 6.96 -52.48 -0.37 -0.72 16 41 H 0.16 -0.20 7.24 -52.49 -0.38 -0.58 16 42 H 0.16 -0.01 8.06 -52.48 -0.42 -0.43 16 43 H 0.10 -0.31 7.96 -51.93 -0.41 -0.72 16 44 H 0.39 -2.54 8.74 45.56 0.40 -2.14 16 45 H -0.25 -0.35 7.11 56.52 0.40 0.06 16 46 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 47 H 0.16 0.14 4.05 -52.48 -0.21 -0.07 16 LS Contribution 391.46 15.07 5.90 5.90 Total: 0.00 -12.00 391.46 -10.37 -22.38 By element: Atomic # 1 Polarization: -6.02 SS G_CDS: -4.53 Total: -10.55 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -4.17 Total: -2.57 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -0.53 Total: -1.41 kcal Atomic # 8 Polarization: -5.48 SS G_CDS: -1.59 Total: -7.07 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.46 Total: -6.68 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -12.00 -10.37 -22.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_13259648.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.606 kcal (2) G-P(sol) polarization free energy of solvation -12.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.373 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.377 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.983 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds