Wall clock time and date at job start Sat Mar 6 2021 17:14:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.46497 * 120.00341 * 2 1 4 4 C 1.53005 * 109.46609 * 269.99649 * 3 2 1 5 5 H 1.08998 * 112.85219 * 43.80215 * 4 3 2 6 6 C 1.53786 * 113.61474 * 174.99638 * 4 3 2 7 7 C 1.53784 * 87.07942 * 139.98135 * 6 4 3 8 8 H 1.08994 * 113.61123 * 89.11901 * 7 6 4 9 9 O 1.42899 * 113.61034 * 220.02037 * 7 6 4 10 10 C 1.53782 * 87.08257 * 334.56746 * 7 6 4 11 11 C 1.34779 * 119.99689 * 179.97438 * 2 1 3 12 12 O 1.21284 * 120.00014 * 180.02562 * 11 2 1 13 13 C 1.50700 * 120.00392 * 0.02562 * 11 2 1 14 14 C 1.50693 * 109.47154 * 180.02562 * 13 11 2 15 15 C 1.38277 * 119.93838 * 90.00214 * 14 13 11 16 16 C 1.38123 * 120.06608 * 180.02562 * 15 14 13 17 17 C 1.38825 * 119.93254 * 0.02562 * 16 15 14 18 18 N 1.40202 * 120.06238 * 179.97438 * 17 16 15 19 19 C 1.36570 * 125.67008 * 235.90292 * 18 17 16 20 20 C 1.34850 * 108.20163 * 180.29653 * 19 18 17 21 21 C 1.40936 * 107.46669 * 359.73460 * 20 19 18 22 22 C 1.34847 * 107.47328 * 359.97438 * 21 20 19 23 23 C 1.50697 * 125.90412 * 180.02562 * 22 21 20 24 24 O 1.42901 * 109.47095 * 217.32738 * 23 22 21 25 25 Si 1.86294 * 109.46986 * 337.32425 * 23 22 21 26 26 C 1.38815 * 119.87232 * 0.24844 * 17 16 15 27 27 C 1.38130 * 119.93570 * 359.49495 * 26 17 16 28 28 H 1.09002 * 109.47109 * 270.00450 * 1 2 3 29 29 H 1.08997 * 109.46730 * 30.00566 * 1 2 3 30 30 H 1.08995 * 109.46984 * 150.00721 * 1 2 3 31 31 H 1.09001 * 109.47469 * 29.99019 * 3 2 1 32 32 H 1.08996 * 109.47745 * 150.00201 * 3 2 1 33 33 H 1.08996 * 113.61519 * 254.53409 * 6 4 3 34 34 H 1.09002 * 113.61005 * 25.43363 * 6 4 3 35 35 H 0.96705 * 113.99486 * 179.97438 * 9 7 6 36 36 H 1.08999 * 113.61750 * 270.88824 * 10 7 6 37 37 H 1.09001 * 113.61019 * 139.98081 * 10 7 6 38 38 H 1.08994 * 109.46580 * 59.99797 * 13 11 2 39 39 H 1.09006 * 109.46662 * 300.00220 * 13 11 2 40 40 H 1.08003 * 119.96649 * 359.97438 * 15 14 13 41 41 H 1.08000 * 120.03149 * 179.97438 * 16 15 14 42 42 H 1.08001 * 125.89793 * 0.02611 * 19 18 17 43 43 H 1.08000 * 126.26797 * 179.73290 * 20 19 18 44 44 H 1.08009 * 126.26479 * 180.02562 * 21 20 19 45 45 H 1.08994 * 109.47379 * 97.32902 * 23 22 21 46 46 H 0.96696 * 114.00289 * 65.49343 * 24 23 22 47 47 H 1.48502 * 110.00261 * 58.68144 * 25 23 22 48 48 H 1.48501 * 110.00092 * 180.02562 * 25 23 22 49 49 H 1.08004 * 120.03560 * 179.72725 * 26 17 16 50 50 H 1.07999 * 119.97178 * 180.25229 * 27 26 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.4526 1.7102 -1.4426 5 1 1.5793 1.5881 -2.0833 6 6 3.1107 3.0955 -1.5556 7 6 3.9637 2.5105 -2.6936 8 1 3.5043 2.6067 -3.6773 9 8 5.3248 2.9452 -2.6703 10 6 3.7455 1.1339 -2.0437 11 6 2.1388 -1.1673 0.0005 12 8 3.3517 -1.1673 0.0010 13 6 1.3854 -2.4724 0.0005 14 6 2.3646 -3.6178 0.0018 15 6 2.8121 -4.1418 1.2006 16 6 3.7101 -5.1913 1.2049 17 6 4.1638 -5.7196 0.0039 18 7 5.0757 -6.7845 0.0051 19 6 6.2922 -6.7919 -0.6155 20 6 6.8711 -7.9894 -0.3933 21 6 5.9846 -8.7476 0.3975 22 6 4.8966 -7.9857 0.6300 23 6 3.6889 -8.3917 1.4347 24 8 2.5105 -7.8588 0.8270 25 14 3.5741 -10.2504 1.4873 26 6 3.7171 -5.1878 -1.1980 27 6 2.8150 -4.1417 -1.1960 28 1 -0.3633 0.0001 1.0277 29 1 -0.3633 0.8899 -0.5139 30 1 -0.3633 -0.8900 -0.5137 31 1 1.6085 2.0284 0.5137 32 1 3.1500 1.1384 0.5138 33 1 2.4262 3.8788 -1.8813 34 1 3.6898 3.3768 -0.6761 35 1 5.8664 2.5802 -3.3834 36 1 4.4981 0.8790 -1.2976 37 1 3.5735 0.3337 -2.7636 38 1 0.7591 -2.5302 -0.8896 39 1 0.7583 -2.5298 0.8903 40 1 2.4597 -3.7295 2.1346 41 1 4.0595 -5.5998 2.1415 42 1 6.7154 -5.9806 -1.1892 43 1 7.8373 -8.3089 -0.7551 44 1 6.1472 -9.7545 0.7530 45 1 3.7813 -8.0045 2.4493 46 1 2.3187 -8.2250 -0.0472 47 1 4.8076 -10.8187 2.0882 48 1 2.3867 -10.6638 2.2775 49 1 4.0718 -5.5939 -2.1338 50 1 2.4641 -3.7302 -2.1308 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_13287746.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:14:37 Heat of formation + Delta-G solvation = 3.286989 kcal Electronic energy + Delta-G solvation = -31808.552460 eV Core-core repulsion = 27576.640802 eV Total energy + Delta-G solvation = -4231.911659 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -42.57425 -41.34323 -40.22041 -39.42807 -37.63758 -36.79998 -35.65460 -34.78206 -32.07658 -31.96304 -30.95760 -29.75401 -28.01507 -27.01874 -26.56602 -25.96105 -23.91184 -23.87809 -22.82040 -21.33517 -20.57235 -20.53367 -20.21589 -19.15906 -18.50618 -18.02098 -17.48523 -17.29336 -17.08144 -16.60589 -16.36598 -16.06682 -15.84864 -15.73401 -15.26599 -15.20788 -14.85352 -14.63773 -14.52195 -14.42657 -14.32138 -14.12910 -14.07101 -13.86041 -13.65056 -13.36293 -13.26238 -13.19449 -13.12226 -12.96034 -12.67921 -12.53485 -12.39448 -12.12465 -11.94254 -11.84511 -11.78201 -11.25858 -10.83672 -10.73743 -10.68583 -10.13481 -9.90160 -9.68147 -9.11759 -8.95148 -4.98408 0.10451 0.44264 1.13965 1.41381 1.64756 1.66567 1.91840 1.92737 2.08958 2.19775 2.74079 3.25887 3.39853 3.46270 3.58248 3.65364 3.70894 3.74795 3.76707 3.82382 3.94847 3.95403 3.99080 4.13364 4.22741 4.23537 4.31263 4.32683 4.41029 4.42560 4.48878 4.50198 4.55279 4.58164 4.64623 4.69585 4.78403 4.82875 4.87003 4.89749 5.01798 5.04180 5.18510 5.27428 5.29836 5.34383 5.39005 5.47299 5.51178 5.55991 5.84225 6.04065 6.29227 6.30578 6.54331 6.62401 6.74181 7.18797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.619 5.619 3 C 0.127 3.873 4 C -0.127 4.127 5 H 0.092 0.908 6 C -0.121 4.121 7 C 0.072 3.928 8 H 0.079 0.921 9 O -0.560 6.560 10 C -0.152 4.152 11 C 0.514 3.486 12 O -0.522 6.522 13 C -0.102 4.102 14 C -0.062 4.062 15 C -0.088 4.088 16 C -0.092 4.092 17 C 0.132 3.868 18 N -0.390 5.390 19 C -0.004 4.004 20 C -0.190 4.190 21 C -0.192 4.192 22 C -0.010 4.010 23 C -0.046 4.046 24 O -0.537 6.537 25 Si 0.717 3.283 26 C -0.114 4.114 27 C -0.090 4.090 28 H 0.059 0.941 29 H 0.074 0.926 30 H 0.073 0.927 31 H 0.079 0.921 32 H 0.087 0.913 33 H 0.075 0.925 34 H 0.092 0.908 35 H 0.379 0.621 36 H 0.096 0.904 37 H 0.062 0.938 38 H 0.104 0.896 39 H 0.104 0.896 40 H 0.125 0.875 41 H 0.121 0.879 42 H 0.164 0.836 43 H 0.142 0.858 44 H 0.142 0.858 45 H 0.111 0.889 46 H 0.376 0.624 47 H -0.254 1.254 48 H -0.254 1.254 49 H 0.128 0.872 50 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.885 0.232 -3.332 6.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 N -0.353 5.353 3 C 0.005 3.995 4 C -0.146 4.146 5 H 0.110 0.890 6 C -0.159 4.159 7 C 0.013 3.987 8 H 0.097 0.903 9 O -0.366 6.366 10 C -0.190 4.190 11 C 0.302 3.698 12 O -0.397 6.397 13 C -0.142 4.142 14 C -0.062 4.062 15 C -0.107 4.107 16 C -0.111 4.111 17 C 0.042 3.958 18 N -0.063 5.063 19 C -0.132 4.132 20 C -0.214 4.214 21 C -0.217 4.217 22 C -0.120 4.120 23 C -0.157 4.157 24 O -0.341 6.341 25 Si 0.617 3.383 26 C -0.133 4.133 27 C -0.109 4.109 28 H 0.078 0.922 29 H 0.093 0.907 30 H 0.092 0.908 31 H 0.098 0.902 32 H 0.105 0.895 33 H 0.093 0.907 34 H 0.111 0.889 35 H 0.226 0.774 36 H 0.114 0.886 37 H 0.081 0.919 38 H 0.122 0.878 39 H 0.122 0.878 40 H 0.143 0.857 41 H 0.139 0.861 42 H 0.181 0.819 43 H 0.159 0.841 44 H 0.160 0.840 45 H 0.128 0.872 46 H 0.223 0.777 47 H -0.178 1.178 48 H -0.179 1.179 49 H 0.146 0.854 50 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -5.692 0.431 -1.723 5.963 hybrid contribution 0.354 0.334 -0.327 0.586 sum -5.338 0.765 -2.051 5.770 Atomic orbital electron populations 1.21869 0.79254 1.03552 1.02233 1.47882 1.07036 1.06034 1.74392 1.21474 0.98040 0.84220 0.95809 1.22727 0.97890 0.96685 0.97315 0.88980 1.23052 0.97615 0.96157 0.99073 1.23367 0.82788 0.94743 0.97781 0.90312 1.86527 1.21115 1.73530 1.55417 1.23669 0.97694 0.96822 1.00802 1.20549 0.88154 0.84938 0.76164 1.90747 1.13675 1.87082 1.48160 1.20722 0.97653 0.90406 1.05373 1.19282 0.97746 0.95774 0.93423 1.20786 0.96603 0.95633 0.97650 1.20870 0.97642 0.95923 0.96665 1.17573 0.93903 0.90085 0.94233 1.41428 1.13816 1.10440 1.40583 1.22016 0.86265 1.00725 1.04168 1.20916 1.01215 0.94231 1.05067 1.20767 0.94899 1.00548 1.05490 1.21012 0.99655 0.86696 1.04653 1.24790 0.82049 1.11915 0.96931 1.86512 1.42096 1.68747 1.36739 0.94095 0.80624 0.74030 0.89508 1.20969 0.97938 0.97822 0.96601 1.20772 0.96803 0.95737 0.97590 0.92211 0.90731 0.90787 0.90232 0.89473 0.90669 0.88929 0.77402 0.88587 0.91910 0.87757 0.87779 0.85676 0.86052 0.81904 0.84069 0.84049 0.87197 0.77698 1.17819 1.17908 0.85447 0.85581 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.30 10.24 59.85 0.61 0.31 16 2 N -0.62 0.57 2.87 -181.57 -0.52 0.04 16 3 C 0.13 -0.06 5.24 -4.04 -0.02 -0.08 16 4 C -0.13 0.08 3.96 -89.80 -0.36 -0.28 16 5 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 6 C -0.12 0.01 7.47 -25.91 -0.19 -0.18 16 7 C 0.07 0.04 5.21 -25.92 -0.14 -0.09 16 8 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 9 O -0.56 -1.18 13.67 -35.23 -0.48 -1.66 16 10 C -0.15 -0.18 6.89 -25.92 -0.18 -0.36 16 11 C 0.51 0.57 7.67 -10.98 -0.08 0.48 16 12 O -0.52 -2.65 14.89 5.55 0.08 -2.56 16 13 C -0.10 0.14 4.38 -29.04 -0.13 0.02 16 14 C -0.06 -0.06 4.37 -104.59 -0.46 -0.52 16 15 C -0.09 -0.16 9.69 -39.61 -0.38 -0.54 16 16 C -0.09 -0.25 8.48 -39.41 -0.33 -0.59 16 17 C 0.13 0.35 4.68 -83.60 -0.39 -0.04 16 18 N -0.39 -1.12 2.84 -56.74 -0.16 -1.28 16 19 C 0.00 -0.01 11.21 -16.64 -0.19 -0.20 16 20 C -0.19 -0.45 10.86 -39.76 -0.43 -0.88 16 21 C -0.19 -0.44 9.40 -39.76 -0.37 -0.82 16 22 C -0.01 -0.02 6.12 -81.68 -0.50 -0.52 16 23 C -0.05 -0.04 2.50 36.00 0.09 0.05 16 24 O -0.54 -0.42 10.86 -35.23 -0.38 -0.80 16 25 Si 0.72 -0.43 30.96 -169.99 -5.26 -5.69 16 26 C -0.11 -0.18 9.76 -39.41 -0.38 -0.56 16 27 C -0.09 -0.08 9.69 -39.60 -0.38 -0.46 16 28 H 0.06 -0.27 8.14 -51.93 -0.42 -0.70 16 29 H 0.07 -0.36 8.07 -51.93 -0.42 -0.78 16 30 H 0.07 -0.40 6.44 -51.93 -0.33 -0.73 16 31 H 0.08 -0.17 8.07 -51.93 -0.42 -0.59 16 32 H 0.09 0.15 7.12 -51.93 -0.37 -0.22 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 34 H 0.09 0.07 8.10 -51.93 -0.42 -0.35 16 35 H 0.38 -0.68 9.12 45.56 0.42 -0.26 16 36 H 0.10 0.35 7.75 -51.93 -0.40 -0.05 16 37 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 38 H 0.10 -0.37 7.35 -51.93 -0.38 -0.75 16 39 H 0.10 -0.32 8.05 -51.93 -0.42 -0.74 16 40 H 0.13 0.05 8.06 -52.48 -0.42 -0.37 16 41 H 0.12 0.34 8.06 -52.49 -0.42 -0.08 16 42 H 0.16 0.14 8.06 -52.49 -0.42 -0.28 16 43 H 0.14 0.10 8.06 -52.49 -0.42 -0.32 16 44 H 0.14 0.15 6.45 -52.48 -0.34 -0.19 16 45 H 0.11 0.14 7.96 -51.93 -0.41 -0.27 16 46 H 0.38 -0.84 8.60 45.56 0.39 -0.45 16 47 H -0.25 -0.42 6.85 56.52 0.39 -0.03 16 48 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 49 H 0.13 0.05 8.06 -52.48 -0.42 -0.37 16 50 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 LS Contribution 410.04 15.07 6.18 6.18 Total: 0.00 -9.35 410.04 -11.74 -21.09 By element: Atomic # 1 Polarization: -3.09 SS G_CDS: -6.97 Total: -10.06 kcal Atomic # 6 Polarization: -1.04 SS G_CDS: -4.22 Total: -5.26 kcal Atomic # 7 Polarization: -0.55 SS G_CDS: -0.68 Total: -1.23 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -0.78 Total: -5.02 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.26 Total: -5.69 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -9.35 -11.74 -21.09 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_13287746.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.377 kcal (2) G-P(sol) polarization free energy of solvation -9.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.741 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.090 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.287 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds