Wall clock time and date at job start Sat Mar 6 2021 17:15:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.46496 * 120.00050 * 2 1 4 4 C 1.53007 * 109.46956 * 270.00100 * 3 2 1 5 5 H 1.08998 * 112.85005 * 316.19485 * 4 3 2 6 6 C 1.53780 * 113.61129 * 87.50331 * 4 3 2 7 7 C 1.53782 * 87.07798 * 139.98122 * 6 4 3 8 8 H 1.08998 * 113.61949 * 89.11817 * 7 6 4 9 9 O 1.42906 * 113.61273 * 220.01692 * 7 6 4 10 10 C 1.53776 * 87.08354 * 334.56440 * 7 6 4 11 11 C 1.34773 * 119.99975 * 179.97438 * 2 1 3 12 12 O 1.21654 * 120.00374 * 184.78461 * 11 2 1 13 13 C 1.47045 * 120.00081 * 4.79067 * 11 2 1 14 14 C 1.36223 * 123.49328 * 155.54603 * 13 11 2 15 15 Cl 1.73598 * 124.60589 * 0.03296 * 14 13 11 16 16 S 1.70448 * 110.78990 * 180.02562 * 14 13 11 17 17 C 1.75497 * 92.46516 * 359.97438 * 16 14 13 18 18 C 1.50705 * 124.68457 * 179.97438 * 17 16 14 19 19 O 1.42901 * 109.47415 * 245.02550 * 18 17 16 20 20 Si 1.86301 * 109.46993 * 5.02787 * 18 17 16 21 21 C 1.32695 * 110.62928 * 0.26605 * 17 16 14 22 22 H 1.09006 * 109.46556 * 267.54865 * 1 2 3 23 23 H 1.08998 * 109.47328 * 27.54107 * 1 2 3 24 24 H 1.08991 * 109.47362 * 147.54676 * 1 2 3 25 25 H 1.09000 * 109.47728 * 29.99774 * 3 2 1 26 26 H 1.09003 * 109.47292 * 150.00211 * 3 2 1 27 27 H 1.08996 * 113.61322 * 254.52339 * 6 4 3 28 28 H 1.08998 * 113.62034 * 25.43276 * 6 4 3 29 29 H 0.96697 * 113.99867 * 277.50021 * 9 7 6 30 30 H 1.09000 * 113.61934 * 270.88630 * 10 7 6 31 31 H 1.09002 * 113.61715 * 139.98082 * 10 7 6 32 32 H 1.09000 * 109.46833 * 125.02845 * 18 17 16 33 33 H 0.96705 * 113.99380 * 59.99671 * 19 18 17 34 34 H 1.48502 * 109.99665 * 179.97438 * 20 18 17 35 35 H 1.48493 * 109.99927 * 301.31547 * 20 18 17 36 36 H 1.08000 * 123.44778 * 179.69610 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4525 1.7104 -1.4426 5 1 2.7834 0.8930 -2.0833 6 6 1.3071 2.5419 -2.0437 7 6 2.3902 3.4191 -2.6935 8 1 2.7032 3.0695 -3.6773 9 8 2.0861 4.8153 -2.6702 10 6 3.3232 2.9729 -1.5555 11 6 2.1389 -1.1672 0.0005 12 8 3.3522 -1.1691 0.0884 13 6 1.4075 -2.4384 -0.1053 14 6 1.9617 -3.5869 -0.5846 15 17 3.5997 -3.7340 -1.1401 16 16 0.8282 -4.8598 -0.5645 17 6 -0.4273 -3.8323 0.1048 18 6 -1.8276 -4.2877 0.4256 19 8 -2.7556 -3.6076 -0.4220 20 14 -1.9626 -6.1247 0.1463 21 6 0.0249 -2.5977 0.2835 22 1 -0.3633 -0.0440 1.0268 23 1 -0.3634 0.9112 -0.4752 24 1 -0.3633 -0.8671 -0.5514 25 1 1.6085 2.0284 0.5138 26 1 3.1500 1.1384 0.5138 27 1 0.7001 1.9929 -2.7636 28 1 0.7099 3.0663 -1.2978 29 1 1.4996 5.1020 -3.3835 30 1 3.2773 3.6151 -0.6759 31 1 4.3438 2.7717 -1.8811 32 1 -2.0536 -4.0610 1.4675 33 1 -2.6138 -3.7639 -1.3657 34 1 -3.3388 -6.5863 0.4597 35 1 -1.6258 -6.4502 -1.2629 36 1 -0.5782 -1.7946 0.6808 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:15:00 Heat of formation + Delta-G solvation = -35.239976 kcal Electronic energy + Delta-G solvation = -22486.371039 eV Core-core repulsion = 18898.858369 eV Total energy + Delta-G solvation = -3587.512670 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.053 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.46948 -40.21511 -39.00140 -37.98194 -37.16259 -36.82204 -35.58238 -31.78862 -30.13063 -27.86906 -26.95832 -26.64693 -25.51936 -23.26154 -21.68589 -20.64304 -20.28355 -19.19928 -18.51435 -18.26397 -17.57716 -17.06136 -16.77693 -16.49892 -16.21692 -15.87267 -15.76305 -15.19634 -14.94743 -14.80581 -14.48407 -14.25008 -14.10839 -13.83733 -13.48492 -13.25797 -13.18834 -12.95784 -12.76965 -12.48373 -12.43733 -12.29562 -11.96653 -11.84311 -11.76164 -11.30433 -11.01711 -10.84242 -10.69166 -9.95572 -9.73313 -9.61922 -5.21675 -0.60430 -0.20953 0.41824 0.71258 1.02002 1.07266 1.38230 1.75225 1.92631 2.16621 3.06254 3.21023 3.29333 3.48343 3.54383 3.68975 3.78133 3.83892 3.90027 4.03657 4.19184 4.21939 4.28271 4.36304 4.42216 4.57035 4.66462 4.68310 4.71681 4.73885 4.83214 4.88580 4.96278 5.10573 5.31231 5.51930 6.11996 6.27420 6.67775 7.14388 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.607 5.607 3 C 0.128 3.872 4 C -0.123 4.123 5 H 0.094 0.906 6 C -0.165 4.165 7 C 0.075 3.925 8 H 0.081 0.919 9 O -0.560 6.560 10 C -0.121 4.121 11 C 0.575 3.425 12 O -0.516 6.516 13 C -0.155 4.155 14 C -0.117 4.117 15 Cl 0.022 6.978 16 S 0.234 5.766 17 C -0.235 4.235 18 C -0.031 4.031 19 O -0.522 6.522 20 Si 0.645 3.355 21 C -0.087 4.087 22 H 0.063 0.937 23 H 0.075 0.925 24 H 0.088 0.912 25 H 0.082 0.918 26 H 0.091 0.909 27 H 0.067 0.933 28 H 0.090 0.910 29 H 0.378 0.622 30 H 0.093 0.907 31 H 0.076 0.924 32 H 0.132 0.868 33 H 0.379 0.621 34 H -0.230 1.230 35 H -0.236 1.236 36 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.519 -1.551 -0.466 4.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.340 5.340 3 C 0.006 3.994 4 C -0.143 4.143 5 H 0.113 0.887 6 C -0.202 4.202 7 C 0.016 3.984 8 H 0.099 0.901 9 O -0.366 6.366 10 C -0.159 4.159 11 C 0.362 3.638 12 O -0.392 6.392 13 C -0.173 4.173 14 C -0.264 4.264 15 Cl 0.051 6.949 16 S 0.499 5.501 17 C -0.353 4.353 18 C -0.144 4.144 19 O -0.328 6.328 20 Si 0.544 3.456 21 C -0.116 4.116 22 H 0.081 0.919 23 H 0.093 0.907 24 H 0.106 0.894 25 H 0.101 0.899 26 H 0.109 0.891 27 H 0.086 0.914 28 H 0.109 0.891 29 H 0.226 0.774 30 H 0.111 0.889 31 H 0.095 0.905 32 H 0.150 0.850 33 H 0.227 0.773 34 H -0.152 1.152 35 H -0.160 1.160 36 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges -3.896 -3.545 -0.240 5.273 hybrid contribution -0.507 2.179 -1.119 2.502 sum -4.403 -1.366 -1.359 4.806 Atomic orbital electron populations 1.22521 0.79588 1.04278 1.01957 1.47601 1.06986 1.05655 1.73740 1.21497 0.98133 0.83896 0.95854 1.22725 0.97365 0.96817 0.97390 0.88730 1.23783 0.97203 0.98282 1.00956 1.23323 0.96178 0.80795 0.98066 0.90118 1.86538 1.70839 1.23895 1.55291 1.23054 0.98326 0.95638 0.98855 1.17471 0.86751 0.82686 0.76899 1.90868 1.12963 1.86853 1.48479 1.20207 0.94710 0.94391 1.08014 1.25480 0.94657 0.99785 1.06493 1.98438 1.12732 1.97296 1.86459 1.83380 0.98244 1.09326 1.59193 1.24813 1.01456 0.98021 1.10968 1.24387 0.83138 1.08291 0.98543 1.86643 1.54104 1.71161 1.20929 0.95121 0.88604 0.75571 0.86345 1.21745 0.92453 0.97499 0.99910 0.91912 0.90654 0.89354 0.89950 0.89076 0.91393 0.89143 0.77427 0.88859 0.90500 0.85037 0.77328 1.15246 1.15975 0.80795 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.15 8.78 59.85 0.53 0.38 16 2 N -0.61 -0.25 2.87 -182.99 -0.53 -0.77 16 3 C 0.13 0.01 5.27 -4.04 -0.02 -0.01 16 4 C -0.12 0.01 3.96 -89.80 -0.36 -0.34 16 5 H 0.09 0.13 8.14 -51.93 -0.42 -0.29 16 6 C -0.16 0.18 7.08 -25.92 -0.18 0.00 16 7 C 0.08 -0.01 5.21 -25.92 -0.14 -0.14 16 8 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 9 O -0.56 -0.53 13.67 -35.23 -0.48 -1.01 16 10 C -0.12 -0.04 7.47 -25.92 -0.19 -0.23 16 11 C 0.58 1.78 7.51 -12.69 -0.10 1.68 16 12 O -0.52 -3.27 14.92 5.23 0.08 -3.20 16 13 C -0.15 -0.24 5.66 -104.58 -0.59 -0.83 16 14 C -0.12 -0.21 6.85 30.01 0.21 0.00 16 15 Cl 0.02 0.07 27.53 -51.86 -1.43 -1.36 16 16 S 0.23 -0.22 20.19 -107.50 -2.17 -2.39 16 17 C -0.24 0.39 5.65 -36.19 -0.20 0.19 16 18 C -0.03 0.08 2.94 36.01 0.11 0.19 16 19 O -0.52 0.87 12.88 -35.23 -0.45 0.42 16 20 Si 0.65 -1.68 30.92 -169.99 -5.26 -6.94 16 21 C -0.09 0.09 7.87 -39.00 -0.31 -0.22 16 22 H 0.06 -0.22 7.41 -51.93 -0.38 -0.61 16 23 H 0.07 -0.26 7.66 -51.93 -0.40 -0.66 16 24 H 0.09 -0.24 4.83 -51.93 -0.25 -0.49 16 25 H 0.08 -0.12 7.77 -51.93 -0.40 -0.52 16 26 H 0.09 0.16 7.36 -51.93 -0.38 -0.23 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.09 -0.10 7.90 -51.93 -0.41 -0.51 16 29 H 0.38 -1.16 9.12 45.56 0.42 -0.74 16 30 H 0.09 0.05 8.10 -51.93 -0.42 -0.37 16 31 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.13 -0.48 7.96 -51.93 -0.41 -0.89 16 33 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 34 H -0.23 -0.04 7.11 56.52 0.40 0.36 16 35 H -0.24 0.24 7.11 56.52 0.40 0.64 16 36 H 0.18 -0.47 4.73 -52.49 -0.25 -0.72 16 LS Contribution 325.56 15.07 4.91 4.91 Total: 0.00 -7.40 325.56 -9.97 -17.37 By element: Atomic # 1 Polarization: -4.30 SS G_CDS: -3.39 Total: -7.69 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -1.25 Total: 0.65 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: -0.53 Total: -0.77 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -0.86 Total: -3.79 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.26 Total: -6.94 kcal Atomic # 16 Polarization: -0.22 SS G_CDS: -2.17 Total: -2.39 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -1.43 Total: -1.36 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -7.40 -9.97 -17.37 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.867 kcal (2) G-P(sol) polarization free energy of solvation -7.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.270 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.970 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.373 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds