Wall clock time and date at job start Sat Mar 6 2021 17:15:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.46505 * 120.00003 * 2 1 4 4 C 1.53000 * 109.47137 * 270.00250 * 3 2 1 5 5 H 1.08991 * 112.85053 * 43.80121 * 4 3 2 6 6 C 1.53786 * 113.61149 * 175.00254 * 4 3 2 7 7 C 1.53779 * 87.08010 * 139.98043 * 6 4 3 8 8 H 1.08997 * 113.61860 * 89.11449 * 7 6 4 9 9 O 1.42904 * 113.61111 * 219.93563 * 7 6 4 10 10 C 1.53781 * 113.61102 * 272.49522 * 4 3 2 11 11 C 1.34780 * 120.00110 * 180.02562 * 2 1 3 12 12 O 1.21630 * 120.00135 * 181.03089 * 11 2 1 13 13 C 1.47259 * 120.00027 * 1.02157 * 11 2 1 14 14 C 1.36333 * 126.97389 * 168.94414 * 13 11 2 15 15 C 1.51000 * 126.78373 * 0.08605 * 14 13 11 16 16 C 1.53397 * 108.24569 * 164.25052 * 15 14 13 17 17 C 1.53436 * 109.08104 * 48.50791 * 16 15 14 18 18 C 1.53122 * 109.38853 * 290.46483 * 17 16 15 19 19 N 1.35207 * 108.66557 * 180.02562 * 14 13 11 20 20 C 1.36421 * 109.89850 * 359.97438 * 19 14 13 21 21 C 1.50697 * 125.49285 * 179.97438 * 20 19 14 22 22 O 1.42894 * 109.47447 * 330.00749 * 21 20 19 23 23 Si 1.86302 * 109.47325 * 210.00168 * 21 20 19 24 24 C 1.34493 * 109.01337 * 0.02562 * 20 19 14 25 25 H 1.09002 * 109.47373 * 263.33649 * 1 2 3 26 26 H 1.09000 * 109.47055 * 23.33655 * 1 2 3 27 27 H 1.09004 * 109.47468 * 143.33511 * 1 2 3 28 28 H 1.09002 * 109.46676 * 30.00492 * 3 2 1 29 29 H 1.09001 * 109.46752 * 149.99727 * 3 2 1 30 30 H 1.09000 * 113.60944 * 254.53098 * 6 4 3 31 31 H 1.09000 * 113.61443 * 25.42775 * 6 4 3 32 32 H 0.96703 * 113.99844 * 179.97438 * 9 7 6 33 33 H 1.09002 * 113.61756 * 334.57152 * 10 4 3 34 34 H 1.08997 * 113.61593 * 105.47068 * 10 4 3 35 35 H 1.08995 * 109.70974 * 283.93615 * 15 14 13 36 36 H 1.09001 * 109.71052 * 44.51980 * 15 14 13 37 37 H 1.09001 * 109.54359 * 168.35263 * 16 15 14 38 38 H 1.08999 * 109.54441 * 288.52423 * 16 15 14 39 39 H 1.08997 * 109.59940 * 170.44586 * 17 16 15 40 40 H 1.09004 * 109.45741 * 50.39963 * 17 16 15 41 41 H 1.09000 * 109.56266 * 291.06252 * 18 17 16 42 42 H 1.08998 * 109.56590 * 170.84065 * 18 17 16 43 43 H 1.09003 * 109.46974 * 90.00607 * 21 20 19 44 44 H 0.96701 * 114.00596 * 179.97438 * 22 21 20 45 45 H 1.48497 * 110.00024 * 298.68283 * 23 21 20 46 46 H 1.48500 * 109.99956 * 60.00361 * 23 21 20 47 47 H 1.08005 * 126.81467 * 179.97438 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4524 1.7105 -1.4425 5 1 1.5791 1.5884 -2.0831 6 6 3.1105 3.0958 -1.5553 7 6 3.9634 2.5110 -2.6934 8 1 3.5041 2.6073 -3.6772 9 8 5.3241 2.9472 -2.6712 10 6 3.7453 1.1343 -2.0437 11 6 2.1389 -1.1672 -0.0005 12 8 3.3550 -1.1673 0.0184 13 6 1.4028 -2.4424 -0.0238 14 6 1.9218 -3.6850 -0.2364 15 6 3.3696 -4.0283 -0.4935 16 6 3.5506 -5.5367 -0.2809 17 6 2.4498 -6.2863 -1.0428 18 6 1.1006 -6.0361 -0.3633 19 7 0.9179 -4.5889 -0.1794 20 6 -0.2641 -3.9549 0.0700 21 6 -1.6063 -4.6269 0.2032 22 8 -1.6316 -5.8050 -0.6051 23 14 -2.9442 -3.4589 -0.3595 24 6 -0.0384 -2.6334 0.1768 25 1 -0.3634 -0.1192 1.0207 26 1 -0.3633 0.9436 -0.4071 27 1 -0.3634 -0.8243 -0.6137 28 1 1.6083 2.0283 0.5139 29 1 3.1498 1.1384 0.5139 30 1 2.4259 3.8791 -1.8808 31 1 3.6896 3.3771 -0.6757 32 1 5.8658 2.5824 -3.3844 33 1 4.4980 0.8793 -1.2977 34 1 3.5733 0.3341 -2.7635 35 1 3.6328 -3.7674 -1.5185 36 1 4.0064 -3.4797 0.2005 37 1 4.5268 -5.8433 -0.6567 38 1 3.4809 -5.7660 0.7824 39 1 2.6654 -7.3547 -1.0396 40 1 2.4107 -5.9269 -2.0712 41 1 1.0831 -6.5321 0.6071 42 1 0.2987 -6.4288 -0.9884 43 1 -1.7752 -4.8978 1.2454 44 1 -2.4674 -6.2899 -0.5679 45 1 -2.9492 -2.2435 0.4938 46 1 -2.7254 -3.0820 -1.7791 47 1 -0.7722 -1.8651 0.3713 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12312124_16915396.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:15:14 Heat of formation + Delta-G solvation = -27.225161 kcal Electronic energy + Delta-G solvation = -28674.941885 eV Core-core repulsion = 24826.385542 eV Total energy + Delta-G solvation = -3848.556343 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.177 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.92963 -41.01557 -39.78572 -37.89275 -37.09515 -36.76201 -35.69440 -33.64566 -31.46346 -30.43485 -28.87184 -27.81447 -26.75136 -26.39719 -24.59742 -24.30572 -22.75906 -21.78773 -20.78891 -20.57955 -19.12878 -18.59259 -18.43289 -17.96431 -17.23957 -16.94394 -16.59970 -16.58354 -16.07631 -15.93888 -15.60413 -15.29860 -15.17497 -15.16549 -14.76031 -14.60127 -14.50056 -14.11211 -14.01429 -13.93219 -13.60218 -13.47849 -13.17520 -12.90324 -12.82470 -12.61142 -12.46759 -12.36540 -12.09193 -12.00972 -11.89981 -11.84178 -11.72516 -11.31160 -10.91812 -10.82376 -10.55131 -9.78039 -9.66840 -9.10102 -4.94918 0.61080 0.95814 1.37052 1.70447 1.76016 2.05365 2.10752 2.38447 3.15123 3.24487 3.43348 3.49802 3.54663 3.60041 3.68928 3.73092 3.76854 3.77849 3.89363 3.94049 4.15193 4.21257 4.26129 4.26952 4.31709 4.35619 4.42068 4.45347 4.51418 4.53101 4.65448 4.70976 4.72386 4.74317 4.77763 4.79331 4.82144 4.87857 4.92395 4.94965 5.05797 5.13593 5.14018 5.36035 5.51779 5.59388 5.94624 6.13274 6.35385 6.79970 6.84024 7.19091 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.610 5.610 3 C 0.128 3.872 4 C -0.117 4.117 5 H 0.101 0.899 6 C -0.116 4.116 7 C 0.073 3.927 8 H 0.096 0.904 9 O -0.581 6.581 10 C -0.154 4.154 11 C 0.585 3.415 12 O -0.577 6.577 13 C -0.257 4.257 14 C 0.101 3.899 15 C -0.054 4.054 16 C -0.123 4.123 17 C -0.133 4.133 18 C 0.098 3.902 19 N -0.423 5.423 20 C 0.024 3.976 21 C -0.054 4.054 22 O -0.563 6.563 23 Si 0.801 3.199 24 C -0.205 4.205 25 H 0.066 0.934 26 H 0.094 0.906 27 H 0.078 0.922 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.093 0.907 31 H 0.083 0.917 32 H 0.392 0.608 33 H 0.069 0.931 34 H 0.051 0.949 35 H 0.078 0.922 36 H 0.082 0.918 37 H 0.092 0.908 38 H 0.068 0.932 39 H 0.113 0.887 40 H 0.066 0.934 41 H 0.089 0.911 42 H 0.118 0.882 43 H 0.098 0.902 44 H 0.409 0.591 45 H -0.275 1.275 46 H -0.306 1.306 47 H 0.173 0.827 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.542 -4.874 -0.537 9.849 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.342 5.342 3 C 0.006 3.994 4 C -0.137 4.137 5 H 0.120 0.880 6 C -0.154 4.154 7 C 0.014 3.986 8 H 0.114 0.886 9 O -0.389 6.389 10 C -0.192 4.192 11 C 0.376 3.624 12 O -0.459 6.459 13 C -0.266 4.266 14 C -0.018 4.018 15 C -0.091 4.091 16 C -0.161 4.161 17 C -0.171 4.171 18 C -0.021 4.021 19 N -0.098 5.098 20 C -0.086 4.086 21 C -0.162 4.162 22 O -0.375 6.375 23 Si 0.704 3.296 24 C -0.228 4.228 25 H 0.085 0.915 26 H 0.113 0.887 27 H 0.097 0.903 28 H 0.121 0.879 29 H 0.083 0.917 30 H 0.111 0.889 31 H 0.102 0.898 32 H 0.242 0.758 33 H 0.088 0.912 34 H 0.070 0.930 35 H 0.096 0.904 36 H 0.101 0.899 37 H 0.110 0.890 38 H 0.087 0.913 39 H 0.131 0.869 40 H 0.084 0.916 41 H 0.107 0.893 42 H 0.136 0.864 43 H 0.116 0.884 44 H 0.262 0.738 45 H -0.201 1.201 46 H -0.234 1.234 47 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges -7.735 -3.964 -0.465 8.704 hybrid contribution 1.021 -0.239 -0.301 1.091 sum -6.714 -4.202 -0.766 7.958 Atomic orbital electron populations 1.22566 0.78457 1.04632 1.02527 1.47646 1.07742 1.05360 1.73414 1.21511 0.97449 0.84340 0.96098 1.22690 0.97434 0.96445 0.97110 0.88039 1.23018 0.97559 0.96331 0.98458 1.23489 0.82563 0.93739 0.98770 0.88588 1.86481 1.22000 1.73786 1.56597 1.23573 0.98182 0.97268 1.00225 1.17585 0.86123 0.83508 0.75138 1.90713 1.14564 1.87810 1.52789 1.19983 0.94270 0.92340 1.20009 1.20618 0.91819 0.88047 1.01304 1.20454 0.88272 0.97697 1.02705 1.21745 1.00404 0.92695 1.01209 1.21981 0.92498 1.03226 0.99369 1.22471 1.00433 0.75946 1.03256 1.44139 1.05169 1.08124 1.52400 1.20434 0.87451 0.92088 1.08635 1.24632 0.97051 0.95096 0.99449 1.86311 1.43510 1.38797 1.68846 0.94545 0.81464 0.77603 0.76015 1.22558 0.94770 0.94738 1.10735 0.91511 0.88727 0.90329 0.87867 0.91738 0.88878 0.89840 0.75790 0.91216 0.92998 0.90355 0.89933 0.88976 0.91337 0.86888 0.91558 0.89278 0.86426 0.88388 0.73830 1.20096 1.23360 0.81055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.06 8.73 127.77 1.12 1.17 16 2 N -0.61 -4.40 2.87 -850.84 -2.44 -6.84 16 3 C 0.13 0.63 5.22 86.38 0.45 1.08 16 4 C -0.12 -0.41 3.97 -10.27 -0.04 -0.46 16 5 H 0.10 0.18 8.14 -2.39 -0.02 0.16 16 6 C -0.12 -0.29 7.47 31.12 0.23 -0.06 16 7 C 0.07 0.31 5.21 31.12 0.16 0.47 16 8 H 0.10 0.06 8.14 -2.39 -0.02 0.04 16 9 O -0.58 -3.93 13.67 -148.98 -2.04 -5.97 16 10 C -0.15 -1.19 6.94 31.12 0.22 -0.98 16 11 C 0.58 7.90 7.66 86.61 0.66 8.57 16 12 O -0.58 -10.91 14.23 -4.13 -0.06 -10.97 16 13 C -0.26 -3.02 6.05 -19.12 -0.12 -3.14 16 14 C 0.10 1.02 6.56 41.69 0.27 1.30 16 15 C -0.05 -0.41 5.47 30.08 0.16 -0.24 16 16 C -0.12 -0.11 5.98 30.87 0.18 0.07 16 17 C -0.13 0.22 5.95 30.78 0.18 0.40 16 18 C 0.10 0.02 6.21 86.32 0.54 0.56 16 19 N -0.42 -2.67 3.11 -493.64 -1.54 -4.20 16 20 C 0.02 0.13 6.18 40.99 0.25 0.38 16 21 C -0.05 0.17 2.99 71.24 0.21 0.38 16 22 O -0.56 3.03 9.97 -148.98 -1.48 1.54 16 23 Si 0.80 -4.03 31.22 68.60 2.14 -1.89 16 24 C -0.20 -1.46 7.35 23.64 0.17 -1.29 16 25 H 0.07 -0.04 7.64 -2.39 -0.02 -0.06 16 26 H 0.09 -0.37 8.02 -2.39 -0.02 -0.39 16 27 H 0.08 0.20 4.84 -2.39 -0.01 0.19 16 28 H 0.10 -0.04 8.07 -2.39 -0.02 -0.06 16 29 H 0.06 0.64 7.11 -2.39 -0.02 0.63 16 30 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 31 H 0.08 0.38 8.10 -2.39 -0.02 0.36 16 32 H 0.39 -0.44 9.12 -74.06 -0.68 -1.12 16 33 H 0.07 0.93 7.77 -2.39 -0.02 0.91 16 34 H 0.05 0.48 8.14 -2.39 -0.02 0.46 16 35 H 0.08 0.64 8.14 -2.39 -0.02 0.62 16 36 H 0.08 0.94 7.22 -2.39 -0.02 0.92 16 37 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 38 H 0.07 0.08 8.12 -2.39 -0.02 0.06 16 39 H 0.11 -0.71 8.14 -2.39 -0.02 -0.73 16 40 H 0.07 0.02 8.11 -2.39 -0.02 0.00 16 41 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 42 H 0.12 -0.09 5.93 -2.39 -0.01 -0.10 16 43 H 0.10 -0.68 7.96 -2.39 -0.02 -0.70 16 44 H 0.41 -6.49 8.74 -74.06 -0.65 -7.14 16 45 H -0.27 0.42 6.88 99.48 0.68 1.10 16 46 H -0.31 -1.26 7.11 99.48 0.71 -0.56 16 47 H 0.17 0.57 3.53 -2.91 -0.01 0.56 16 Total: 0.00 -24.34 362.44 -1.06 -25.40 By element: Atomic # 1 Polarization: -4.98 SS G_CDS: -0.31 Total: -5.29 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: 4.67 Total: 8.22 kcal Atomic # 7 Polarization: -7.06 SS G_CDS: -3.98 Total: -11.04 kcal Atomic # 8 Polarization: -11.82 SS G_CDS: -3.58 Total: -15.40 kcal Atomic # 14 Polarization: -4.03 SS G_CDS: 2.14 Total: -1.89 kcal Total: -24.34 -1.06 -25.40 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_16915396.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.824 kcal (2) G-P(sol) polarization free energy of solvation -24.339 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.062 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.401 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.225 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds