Wall clock time and date at job start Sat Mar 6 2021 17:15:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46490 * 1 3 3 C 1.46498 * 120.00201 * 2 1 4 4 C 1.53002 * 109.47019 * 270.00269 * 3 2 1 5 5 H 1.08999 * 112.84969 * 316.19054 * 4 3 2 6 6 C 1.53782 * 113.61639 * 87.49961 * 4 3 2 7 7 C 1.53787 * 87.07948 * 139.98055 * 6 4 3 8 8 H 1.08991 * 113.61247 * 89.11945 * 7 6 4 9 9 O 1.42905 * 113.68557 * 220.00585 * 7 6 4 10 10 C 1.53781 * 87.08253 * 334.56767 * 7 6 4 11 11 C 1.34777 * 120.00221 * 180.02562 * 2 1 3 12 12 O 1.21283 * 120.00035 * 180.02562 * 11 2 1 13 13 C 1.50703 * 120.00008 * 359.97438 * 11 2 1 14 14 O 1.42897 * 109.47339 * 179.97438 * 13 11 2 15 15 C 1.35896 * 116.99891 * 180.02562 * 14 13 11 16 16 C 1.38717 * 120.05449 * 180.25402 * 15 14 13 17 17 C 1.50693 * 120.02742 * 359.97438 * 16 15 14 18 18 O 1.42905 * 109.47246 * 75.22907 * 17 16 15 19 19 Si 1.86305 * 109.47207 * 195.22703 * 17 16 15 20 20 C 1.38163 * 119.94349 * 180.21612 * 16 15 14 21 21 C 1.38251 * 120.05527 * 359.50941 * 20 16 15 22 22 C 1.38291 * 120.11088 * 0.28334 * 21 20 16 23 23 C 1.38121 * 120.05358 * 359.95164 * 22 21 20 24 24 H 1.09005 * 109.47042 * 270.00171 * 1 2 3 25 25 H 1.09004 * 109.47715 * 29.99988 * 1 2 3 26 26 H 1.08999 * 109.47567 * 150.00057 * 1 2 3 27 27 H 1.09002 * 109.47337 * 30.00040 * 3 2 1 28 28 H 1.08997 * 109.47641 * 149.99976 * 3 2 1 29 29 H 1.08990 * 113.61333 * 254.52934 * 6 4 3 30 30 H 1.08999 * 113.61013 * 25.43373 * 6 4 3 31 31 H 0.96691 * 114.00324 * 277.53480 * 9 7 6 32 32 H 1.09000 * 113.61469 * 270.88550 * 10 7 6 33 33 H 1.08999 * 113.68882 * 139.99348 * 10 7 6 34 34 H 1.09006 * 109.46463 * 60.00278 * 13 11 2 35 35 H 1.08996 * 109.47285 * 300.00462 * 13 11 2 36 36 H 1.08999 * 109.47741 * 315.23032 * 17 16 15 37 37 H 0.96701 * 113.99557 * 59.99747 * 18 17 16 38 38 H 1.48497 * 109.99972 * 180.02562 * 19 17 16 39 39 H 1.48496 * 109.99926 * 301.32111 * 19 17 16 40 40 H 1.08002 * 119.97507 * 179.79516 * 20 16 15 41 41 H 1.07998 * 119.94295 * 180.25934 * 21 20 16 42 42 H 1.08000 * 119.96802 * 179.97438 * 22 21 20 43 43 H 1.07997 * 120.02529 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1974 1.2687 0.0000 4 6 2.4524 1.7104 -1.4425 5 1 2.7834 0.8930 -2.0832 6 6 1.3070 2.5419 -2.0438 7 6 2.3902 3.4192 -2.6935 8 1 2.7031 3.0695 -3.6772 9 8 2.0875 4.8157 -2.6713 10 6 3.3232 2.9729 -1.5554 11 6 2.1388 -1.1672 -0.0005 12 8 3.3517 -1.1671 -0.0001 13 6 1.3854 -2.4723 -0.0005 14 8 2.3140 -3.5585 -0.0017 15 6 1.7945 -4.8142 -0.0024 16 6 2.6385 -5.9151 0.0017 17 6 4.1327 -5.7199 0.0064 18 8 4.5562 -5.3159 1.3101 19 14 4.9696 -7.3205 -0.4502 20 6 2.1079 -7.1908 -0.0035 21 6 0.7371 -7.3706 -0.0026 22 6 -0.1063 -6.2747 -0.0024 23 6 0.4191 -4.9974 -0.0021 24 1 -0.3633 0.0000 1.0277 25 1 -0.3635 0.8900 -0.5138 26 1 -0.3634 -0.8900 -0.5138 27 1 1.6084 2.0284 0.5138 28 1 3.1498 1.1384 0.5138 29 1 0.7001 1.9929 -2.7635 30 1 0.7099 3.0663 -1.2977 31 1 1.5011 5.1024 -3.3847 32 1 3.2772 3.6151 -0.6759 33 1 4.3442 2.7716 -1.8797 34 1 0.7584 -2.5298 -0.8904 35 1 0.7590 -2.5303 0.8896 36 1 4.4009 -4.9503 -0.7173 37 1 4.3497 -5.9546 2.0062 38 1 6.4437 -7.1413 -0.4485 39 1 4.5869 -8.3859 0.5108 40 1 2.7645 -8.0483 -0.0036 41 1 0.3244 -8.3686 -0.0025 42 1 -1.1768 -6.4179 -0.0022 43 1 -0.2400 -4.1419 -0.0015 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12312124_2989392.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:15:17 Heat of formation + Delta-G solvation = -86.061075 kcal Electronic energy + Delta-G solvation = -25543.175836 eV Core-core repulsion = 21749.887133 eV Total energy + Delta-G solvation = -3793.288703 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.73645 -41.00966 -40.03116 -38.56644 -37.62687 -36.92308 -35.70649 -32.78617 -31.49071 -30.48835 -28.71395 -27.14005 -26.69802 -26.67917 -24.04681 -23.07676 -22.59372 -20.64122 -20.39052 -19.58966 -18.53306 -18.24307 -17.98808 -17.61205 -17.33739 -16.91487 -16.56684 -16.45622 -15.98395 -15.78209 -15.55431 -15.12566 -15.04108 -14.88389 -14.58787 -14.18067 -14.05004 -13.72235 -13.51470 -13.48016 -13.34256 -13.13145 -13.04671 -12.79172 -12.53526 -12.41108 -12.13878 -11.88585 -11.81686 -11.69029 -11.30116 -11.00774 -10.76711 -10.54584 -9.97741 -9.78436 -9.22095 -4.96504 0.23561 0.41909 1.27775 1.37039 1.41590 1.53220 1.92696 2.44377 2.69993 3.25615 3.31452 3.44266 3.50203 3.57200 3.70335 3.77938 3.82708 3.92207 3.93459 3.97887 4.11693 4.19499 4.27091 4.30652 4.31329 4.37154 4.53477 4.58769 4.61966 4.67050 4.75025 4.77518 4.78752 4.88214 4.97530 4.98181 5.08919 5.28388 5.30442 5.37819 5.47067 5.53238 5.76221 6.13740 6.35614 6.51656 6.87191 6.97466 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.605 5.605 3 C 0.128 3.872 4 C -0.119 4.119 5 H 0.078 0.922 6 C -0.146 4.146 7 C 0.073 3.927 8 H 0.088 0.912 9 O -0.580 6.580 10 C -0.131 4.131 11 C 0.506 3.494 12 O -0.571 6.571 13 C 0.041 3.959 14 O -0.314 6.314 15 C 0.128 3.872 16 C -0.165 4.165 17 C -0.084 4.084 18 O -0.550 6.550 19 Si 0.784 3.216 20 C -0.088 4.088 21 C -0.154 4.154 22 C -0.073 4.073 23 C -0.212 4.212 24 H 0.075 0.925 25 H 0.092 0.908 26 H 0.092 0.908 27 H 0.105 0.895 28 H 0.060 0.940 29 H 0.081 0.919 30 H 0.097 0.903 31 H 0.395 0.605 32 H 0.089 0.911 33 H 0.066 0.934 34 H 0.123 0.877 35 H 0.117 0.883 36 H 0.094 0.906 37 H 0.381 0.619 38 H -0.308 1.308 39 H -0.264 1.264 40 H 0.146 0.854 41 H 0.151 0.849 42 H 0.155 0.845 43 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.982 -1.707 -3.084 11.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.338 5.338 3 C 0.005 3.995 4 C -0.138 4.138 5 H 0.096 0.904 6 C -0.184 4.184 7 C 0.014 3.986 8 H 0.106 0.894 9 O -0.388 6.388 10 C -0.169 4.169 11 C 0.294 3.706 12 O -0.450 6.450 13 C -0.036 4.036 14 O -0.227 6.227 15 C 0.082 3.918 16 C -0.166 4.166 17 C -0.192 4.192 18 O -0.357 6.357 19 Si 0.688 3.312 20 C -0.105 4.105 21 C -0.172 4.172 22 C -0.091 4.091 23 C -0.230 4.230 24 H 0.094 0.906 25 H 0.111 0.889 26 H 0.110 0.890 27 H 0.123 0.877 28 H 0.079 0.921 29 H 0.100 0.900 30 H 0.116 0.884 31 H 0.245 0.755 32 H 0.107 0.893 33 H 0.085 0.915 34 H 0.141 0.859 35 H 0.134 0.866 36 H 0.113 0.887 37 H 0.230 0.770 38 H -0.237 1.237 39 H -0.189 1.189 40 H 0.164 0.836 41 H 0.169 0.831 42 H 0.173 0.827 43 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -9.046 -1.739 -2.634 9.581 hybrid contribution -0.168 0.577 0.760 0.969 sum -9.214 -1.162 -1.874 9.475 Atomic orbital electron populations 1.22257 0.76324 1.05519 1.03838 1.47828 1.08774 1.04583 1.72662 1.21502 0.97417 0.84477 0.96070 1.22576 0.98180 0.96147 0.96913 0.90405 1.23671 0.96489 0.97333 1.00903 1.23364 0.96380 0.80754 0.98076 0.89424 1.86491 1.71574 1.24282 1.56490 1.23112 0.98338 0.96131 0.99334 1.20619 0.87589 0.86145 0.76250 1.90764 1.16135 1.87720 1.50332 1.22722 0.91546 0.83283 1.06085 1.86189 1.35508 1.12432 1.88600 1.19095 0.92703 0.83549 0.96420 1.19711 0.95523 0.92161 1.09177 1.25236 0.93979 1.12701 0.87245 1.86655 1.82603 1.49069 1.17411 0.94046 0.75698 0.72773 0.88666 1.21193 0.96848 0.94987 0.97518 1.21414 0.92632 1.00631 1.02493 1.21405 1.01493 0.91227 0.95008 1.21580 0.92639 1.00384 1.08395 0.90631 0.88891 0.88956 0.87677 0.92107 0.90023 0.88424 0.75497 0.89252 0.91485 0.85938 0.86565 0.88748 0.77018 1.23694 1.18945 0.83623 0.83127 0.82737 0.82859 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.63 10.24 127.77 1.31 0.68 16 2 N -0.60 0.44 2.87 -846.77 -2.43 -1.99 16 3 C 0.13 0.08 5.24 86.38 0.45 0.54 16 4 C -0.12 -0.03 3.96 -10.26 -0.04 -0.07 16 5 H 0.08 0.32 8.14 -2.39 -0.02 0.30 16 6 C -0.15 0.59 7.04 31.12 0.22 0.81 16 7 C 0.07 -0.05 5.21 31.12 0.16 0.12 16 8 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 9 O -0.58 -0.68 13.67 -148.98 -2.04 -2.72 16 10 C -0.13 -0.25 7.47 31.12 0.23 -0.02 16 11 C 0.51 3.31 7.75 87.66 0.68 3.99 16 12 O -0.57 -10.52 16.08 16.00 0.26 -10.27 16 13 C 0.04 0.01 3.77 71.24 0.27 0.28 16 14 O -0.31 -2.91 9.00 -73.34 -0.66 -3.57 16 15 C 0.13 0.66 6.66 22.51 0.15 0.81 16 16 C -0.16 -0.80 5.27 -19.77 -0.10 -0.91 16 17 C -0.08 -0.62 2.38 71.23 0.17 -0.45 16 18 O -0.55 -6.32 12.88 -148.98 -1.92 -8.24 16 19 Si 0.78 1.48 30.25 68.60 2.08 3.55 16 20 C -0.09 0.00 8.66 22.26 0.19 0.19 16 21 C -0.15 0.44 10.04 22.29 0.22 0.66 16 22 C -0.07 0.27 10.04 22.25 0.22 0.50 16 23 C -0.21 0.32 9.04 22.36 0.20 0.52 16 24 H 0.08 -0.90 8.14 -2.38 -0.02 -0.92 16 25 H 0.09 -1.14 7.64 -2.39 -0.02 -1.15 16 26 H 0.09 -1.29 6.44 -2.39 -0.02 -1.31 16 27 H 0.11 -0.41 7.77 -2.39 -0.02 -0.43 16 28 H 0.06 0.41 7.42 -2.39 -0.02 0.39 16 29 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 30 H 0.10 -0.49 7.90 -2.39 -0.02 -0.51 16 31 H 0.39 -2.89 9.12 -74.06 -0.68 -3.56 16 32 H 0.09 0.22 8.10 -2.39 -0.02 0.20 16 33 H 0.07 0.23 8.14 -2.39 -0.02 0.21 16 34 H 0.12 -0.81 6.92 -2.38 -0.02 -0.83 16 35 H 0.12 -0.61 7.63 -2.39 -0.02 -0.63 16 36 H 0.09 1.03 7.82 -2.39 -0.02 1.01 16 37 H 0.38 1.47 8.70 -74.06 -0.64 0.83 16 38 H -0.31 -3.15 7.11 99.48 0.71 -2.45 16 39 H -0.26 -0.60 6.68 99.48 0.66 0.06 16 40 H 0.15 -0.46 4.86 -2.91 -0.01 -0.48 16 41 H 0.15 -1.14 8.06 -2.91 -0.02 -1.16 16 42 H 0.15 -1.43 8.06 -2.91 -0.02 -1.45 16 43 H 0.15 -1.18 6.30 -2.91 -0.02 -1.20 16 Total: 0.00 -28.75 354.78 -0.66 -29.41 By element: Atomic # 1 Polarization: -13.52 SS G_CDS: -0.29 Total: -13.81 kcal Atomic # 6 Polarization: 3.30 SS G_CDS: 4.34 Total: 7.64 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -2.43 Total: -1.99 kcal Atomic # 8 Polarization: -20.44 SS G_CDS: -4.36 Total: -24.80 kcal Atomic # 14 Polarization: 1.48 SS G_CDS: 2.08 Total: 3.55 kcal Total: -28.75 -0.66 -29.41 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_2989392.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.652 kcal (2) G-P(sol) polarization free energy of solvation -28.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.399 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.662 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.409 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds