Wall clock time and date at job start Sat Mar 6 2021 17:15:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.46496 * 119.99896 * 2 1 4 4 C 1.53001 * 109.47073 * 269.99770 * 3 2 1 5 5 H 1.09003 * 112.84680 * 43.80401 * 4 3 2 6 6 C 1.53775 * 113.61522 * 175.00151 * 4 3 2 7 7 C 1.53784 * 87.08305 * 139.98272 * 6 4 3 8 8 H 1.09004 * 113.61699 * 89.11306 * 7 6 4 9 9 O 1.42900 * 113.61560 * 220.01954 * 7 6 4 10 10 C 1.53777 * 87.07886 * 334.56965 * 7 6 4 11 11 C 1.34777 * 119.99832 * 179.97438 * 2 1 3 12 12 O 1.21278 * 119.99854 * 179.97438 * 11 2 1 13 13 C 1.50703 * 120.00161 * 0.02562 * 11 2 1 14 14 C 1.53000 * 109.46912 * 179.97438 * 13 11 2 15 15 C 1.52997 * 109.47060 * 179.97438 * 14 13 11 16 16 O 1.42895 * 109.47503 * 180.02562 * 15 14 13 17 17 C 1.35900 * 117.00356 * 180.02562 * 16 15 14 18 18 C 1.38711 * 120.05562 * 179.97438 * 17 16 15 19 19 C 1.38163 * 119.94281 * 180.02562 * 18 17 16 20 20 C 1.50702 * 119.97443 * 180.02562 * 19 18 17 21 21 O 1.42903 * 109.46667 * 65.00303 * 20 19 18 22 22 Si 1.86296 * 109.47317 * 184.99764 * 20 19 18 23 23 C 1.38245 * 120.05829 * 359.97438 * 19 18 17 24 24 C 1.38288 * 120.10906 * 0.02562 * 23 19 18 25 25 C 1.38125 * 120.05518 * 359.68193 * 24 23 19 26 26 H 1.09003 * 109.46862 * 270.00235 * 1 2 3 27 27 H 1.08996 * 109.47101 * 30.00360 * 1 2 3 28 28 H 1.09003 * 109.46885 * 149.99968 * 1 2 3 29 29 H 1.08998 * 109.47205 * 29.99486 * 3 2 1 30 30 H 1.08997 * 109.47416 * 150.00347 * 3 2 1 31 31 H 1.09004 * 113.61490 * 254.52564 * 6 4 3 32 32 H 1.09000 * 113.61519 * 25.34815 * 6 4 3 33 33 H 0.96696 * 113.99893 * 179.97438 * 9 7 6 34 34 H 1.09005 * 113.61257 * 270.88453 * 10 7 6 35 35 H 1.09001 * 113.61573 * 139.98361 * 10 7 6 36 36 H 1.09001 * 109.46980 * 59.99654 * 13 11 2 37 37 H 1.08992 * 109.47158 * 299.99760 * 13 11 2 38 38 H 1.09002 * 109.47398 * 300.00078 * 14 13 11 39 39 H 1.09001 * 109.47194 * 60.00258 * 14 13 11 40 40 H 1.09002 * 109.47153 * 300.00319 * 15 14 13 41 41 H 1.08998 * 109.47533 * 59.99948 * 15 14 13 42 42 H 1.07999 * 120.02730 * 359.97438 * 18 17 16 43 43 H 1.08997 * 109.47338 * 305.00320 * 20 19 18 44 44 H 0.96697 * 114.00498 * 59.99900 * 21 20 19 45 45 H 1.48500 * 109.99860 * 180.02562 * 22 20 19 46 46 H 1.48501 * 110.00513 * 301.32449 * 22 20 19 47 47 H 1.07998 * 119.94863 * 179.97438 * 23 19 18 48 48 H 1.08000 * 119.97287 * 179.97438 * 24 23 19 49 49 H 1.07996 * 120.02800 * 180.32252 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4525 1.7103 -1.4425 5 1 1.5792 1.5882 -2.0832 6 6 3.1105 3.0956 -1.5554 7 6 3.9636 2.5108 -2.6935 8 1 3.5042 2.6070 -3.6773 9 8 5.3247 2.9455 -2.6703 10 6 3.7453 1.1342 -2.0438 11 6 2.1389 -1.1672 0.0005 12 8 3.3517 -1.1672 0.0001 13 6 1.3854 -2.4723 0.0005 14 6 2.3797 -3.6352 0.0005 15 6 1.6147 -4.9602 0.0012 16 8 2.5432 -6.0464 0.0018 17 6 2.0238 -7.3022 0.0018 18 6 2.8678 -8.4031 0.0019 19 6 2.3372 -9.6788 0.0014 20 6 3.2534 -10.8753 0.0021 21 8 3.9941 -10.9073 1.2237 22 14 2.2419 -12.4321 -0.1518 23 6 0.9665 -9.8586 0.0015 24 6 0.1230 -8.7628 0.0014 25 6 0.6485 -7.4854 0.0080 26 1 -0.3633 0.0000 1.0277 27 1 -0.3633 0.8899 -0.5139 28 1 -0.3633 -0.8900 -0.5139 29 1 1.6084 2.0284 0.5137 30 1 3.1499 1.1384 0.5138 31 1 2.4260 3.8789 -1.8811 32 1 3.6885 3.3775 -0.6753 33 1 5.8663 2.5807 -3.3834 34 1 4.4980 0.8792 -1.2977 35 1 3.5733 0.3339 -2.7636 36 1 0.7590 -2.5302 -0.8897 37 1 0.7585 -2.5299 0.8902 38 1 3.0064 -3.5775 -0.8895 39 1 3.0063 -3.5775 0.8905 40 1 0.9883 -5.0177 0.8914 41 1 0.9877 -5.0183 -0.8885 42 1 3.9386 -8.2631 0.0014 43 1 3.9430 -10.8054 -0.8392 44 1 3.4434 -10.9692 2.0161 45 1 3.1339 -13.6194 -0.1517 46 1 1.2756 -12.5233 0.9722 47 1 0.5537 -10.8566 0.0007 48 1 -0.9475 -8.9058 0.0011 49 1 -0.0106 -6.6299 0.0132 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12312124_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:15:29 Heat of formation + Delta-G solvation = -102.971295 kcal Electronic energy + Delta-G solvation = -28190.893521 eV Core-core repulsion = 24085.796298 eV Total energy + Delta-G solvation = -4105.097223 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.37976 -41.16796 -39.99621 -39.22178 -37.43482 -36.89440 -35.71513 -34.88849 -32.48387 -31.32796 -29.99266 -28.19868 -27.19073 -26.78742 -26.53633 -24.08259 -23.67983 -22.83745 -21.84130 -20.56971 -20.17288 -19.17741 -18.57060 -18.04575 -17.91361 -17.53414 -17.26748 -17.06869 -16.79905 -16.69547 -16.28046 -16.15733 -15.52508 -15.39386 -15.07822 -14.83866 -14.62069 -14.58631 -14.16408 -14.10929 -13.90229 -13.51064 -13.39076 -13.35872 -13.25024 -13.08886 -12.97609 -12.76864 -12.59865 -12.40425 -12.31745 -12.27772 -11.91645 -11.82187 -11.62003 -11.54948 -11.28394 -10.86124 -10.79446 -10.66604 -9.94142 -9.63915 -9.25037 -4.91412 0.21313 0.40855 1.28753 1.60780 1.61660 1.85982 1.96265 2.29146 2.67278 3.26212 3.38796 3.43016 3.58330 3.62837 3.65874 3.79367 3.83878 3.85578 3.94056 3.96239 4.09129 4.13646 4.24794 4.28260 4.30223 4.34695 4.38848 4.40159 4.43811 4.51399 4.54810 4.59654 4.68452 4.72342 4.74421 4.79724 4.85512 4.96957 4.98054 4.98802 5.01165 5.14505 5.15956 5.28664 5.38592 5.38803 5.45319 5.56360 5.74723 6.37225 6.42984 6.45435 6.80913 7.17647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.616 5.616 3 C 0.124 3.876 4 C -0.113 4.113 5 H 0.110 0.890 6 C -0.120 4.120 7 C 0.069 3.931 8 H 0.099 0.901 9 O -0.584 6.584 10 C -0.156 4.156 11 C 0.502 3.498 12 O -0.583 6.583 13 C -0.126 4.126 14 C -0.100 4.100 15 C 0.059 3.941 16 O -0.340 6.340 17 C 0.115 3.885 18 C -0.152 4.152 19 C -0.082 4.082 20 C -0.094 4.094 21 O -0.551 6.551 22 Si 0.784 3.216 23 C -0.161 4.161 24 C -0.072 4.072 25 C -0.205 4.205 26 H 0.069 0.931 27 H 0.086 0.914 28 H 0.093 0.907 29 H 0.102 0.898 30 H 0.056 0.944 31 H 0.093 0.907 32 H 0.078 0.922 33 H 0.392 0.608 34 H 0.063 0.937 35 H 0.057 0.943 36 H 0.127 0.873 37 H 0.124 0.876 38 H 0.059 0.941 39 H 0.056 0.944 40 H 0.082 0.918 41 H 0.086 0.914 42 H 0.115 0.885 43 H 0.119 0.881 44 H 0.386 0.614 45 H -0.305 1.305 46 H -0.276 1.276 47 H 0.147 0.853 48 H 0.159 0.841 49 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.240 1.297 -3.025 12.674 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 N -0.348 5.348 3 C 0.002 3.998 4 C -0.132 4.132 5 H 0.128 0.872 6 C -0.158 4.158 7 C 0.011 3.989 8 H 0.116 0.884 9 O -0.392 6.392 10 C -0.194 4.194 11 C 0.292 3.708 12 O -0.462 6.462 13 C -0.165 4.165 14 C -0.138 4.138 15 C -0.015 4.015 16 O -0.254 6.254 17 C 0.070 3.930 18 C -0.171 4.171 19 C -0.082 4.082 20 C -0.201 4.201 21 O -0.359 6.359 22 Si 0.689 3.311 23 C -0.179 4.179 24 C -0.090 4.090 25 C -0.223 4.223 26 H 0.088 0.912 27 H 0.105 0.895 28 H 0.112 0.888 29 H 0.120 0.880 30 H 0.075 0.925 31 H 0.111 0.889 32 H 0.097 0.903 33 H 0.242 0.758 34 H 0.082 0.918 35 H 0.075 0.925 36 H 0.145 0.855 37 H 0.142 0.858 38 H 0.077 0.923 39 H 0.075 0.925 40 H 0.100 0.900 41 H 0.104 0.896 42 H 0.133 0.867 43 H 0.137 0.863 44 H 0.235 0.765 45 H -0.233 1.233 46 H -0.203 1.203 47 H 0.164 0.836 48 H 0.177 0.823 49 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -11.363 1.015 -2.536 11.687 hybrid contribution 1.085 0.219 0.756 1.340 sum -10.279 1.235 -1.780 10.504 Atomic orbital electron populations 1.22145 0.76701 1.05210 1.03385 1.48000 1.08588 1.05264 1.72938 1.21445 0.97330 0.85204 0.95866 1.22686 0.97413 0.95854 0.97290 0.87170 1.23041 0.97670 0.96811 0.98306 1.23556 0.82456 0.93999 0.98922 0.88357 1.86482 1.22156 1.73960 1.56582 1.23575 0.98308 0.97296 1.00214 1.21207 0.87727 0.86747 0.75133 1.90724 1.16262 1.88016 1.51246 1.21561 0.98581 0.89074 1.07271 1.21144 0.98141 0.91451 1.03111 1.22978 0.91503 0.83674 1.03357 1.86055 1.37806 1.12900 1.88656 1.19210 0.92885 0.84243 0.96629 1.20338 0.99612 0.90634 1.06527 1.20124 0.94771 0.94015 0.99311 1.25445 1.00569 1.04582 0.89525 1.86580 1.37344 1.95666 1.16299 0.93841 0.77382 0.71673 0.88253 1.21224 0.92170 1.00343 1.04136 1.21308 1.01424 0.90925 0.95332 1.21607 0.93064 1.00105 1.07529 0.91233 0.89500 0.88810 0.88033 0.92548 0.88890 0.90313 0.75811 0.91793 0.92451 0.85532 0.85844 0.92254 0.92511 0.89961 0.89634 0.86707 0.86285 0.76468 1.23305 1.20260 0.83581 0.82291 0.82855 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.74 10.24 127.77 1.31 0.56 16 2 N -0.62 1.51 2.87 -846.76 -2.43 -0.93 16 3 C 0.12 -0.06 5.24 86.38 0.45 0.40 16 4 C -0.11 0.12 3.96 -10.27 -0.04 0.08 16 5 H 0.11 -0.48 8.14 -2.39 -0.02 -0.50 16 6 C -0.12 0.00 7.47 31.12 0.23 0.24 16 7 C 0.07 0.14 5.21 31.12 0.16 0.30 16 8 H 0.10 -0.20 8.14 -2.39 -0.02 -0.22 16 9 O -0.58 -3.25 13.67 -148.98 -2.04 -5.29 16 10 C -0.16 -0.68 6.89 31.12 0.21 -0.47 16 11 C 0.50 1.28 7.67 87.66 0.67 1.96 16 12 O -0.58 -7.52 14.84 -3.02 -0.04 -7.56 16 13 C -0.13 0.69 4.25 29.85 0.13 0.82 16 14 C -0.10 -0.08 4.87 30.59 0.15 0.07 16 15 C 0.06 -0.13 4.74 71.98 0.34 0.22 16 16 O -0.34 -2.17 10.14 -92.43 -0.94 -3.11 16 17 C 0.12 0.58 6.69 22.51 0.15 0.73 16 18 C -0.15 -1.00 9.62 22.37 0.22 -0.78 16 19 C -0.08 -0.21 5.35 -19.88 -0.11 -0.32 16 20 C -0.09 -0.17 2.80 71.24 0.20 0.03 16 21 O -0.55 -3.03 12.83 -148.98 -1.91 -4.94 16 22 Si 0.78 -1.28 29.88 68.60 2.05 0.77 16 23 C -0.16 0.19 8.67 22.28 0.19 0.39 16 24 C -0.07 0.20 10.04 22.25 0.22 0.43 16 25 C -0.20 0.17 9.04 22.37 0.20 0.38 16 26 H 0.07 -0.85 8.14 -2.39 -0.02 -0.87 16 27 H 0.09 -1.12 8.07 -2.39 -0.02 -1.14 16 28 H 0.09 -1.39 6.44 -2.39 -0.02 -1.41 16 29 H 0.10 -0.51 8.07 -2.39 -0.02 -0.53 16 30 H 0.06 0.35 7.12 -2.39 -0.02 0.33 16 31 H 0.09 -0.33 8.14 -2.38 -0.02 -0.35 16 32 H 0.08 0.23 8.10 -2.39 -0.02 0.21 16 33 H 0.39 -0.85 9.12 -74.06 -0.68 -1.52 16 34 H 0.06 0.71 7.75 -2.38 -0.02 0.70 16 35 H 0.06 0.28 8.14 -2.39 -0.02 0.27 16 36 H 0.13 -1.43 7.40 -2.39 -0.02 -1.45 16 37 H 0.12 -1.30 8.11 -2.39 -0.02 -1.32 16 38 H 0.06 0.32 8.10 -2.39 -0.02 0.30 16 39 H 0.06 0.33 8.10 -2.39 -0.02 0.31 16 40 H 0.08 -0.49 7.65 -2.39 -0.02 -0.51 16 41 H 0.09 -0.55 7.67 -2.39 -0.02 -0.57 16 42 H 0.11 1.03 8.06 -2.91 -0.02 1.01 16 43 H 0.12 0.13 7.96 -2.39 -0.02 0.11 16 44 H 0.39 -0.22 8.70 -74.06 -0.64 -0.87 16 45 H -0.30 -1.90 7.11 99.48 0.71 -1.20 16 46 H -0.28 -0.28 7.01 99.48 0.70 0.42 16 47 H 0.15 -0.78 4.83 -2.91 -0.01 -0.80 16 48 H 0.16 -1.41 8.06 -2.91 -0.02 -1.44 16 49 H 0.15 -0.99 6.30 -2.91 -0.02 -1.01 16 Total: 0.00 -27.15 397.44 -0.95 -28.10 By element: Atomic # 1 Polarization: -11.72 SS G_CDS: -0.33 Total: -12.06 kcal Atomic # 6 Polarization: 0.31 SS G_CDS: 4.70 Total: 5.01 kcal Atomic # 7 Polarization: 1.51 SS G_CDS: -2.43 Total: -0.93 kcal Atomic # 8 Polarization: -15.97 SS G_CDS: -4.93 Total: -20.90 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: 2.05 Total: 0.77 kcal Total: -27.15 -0.95 -28.10 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.870 kcal (2) G-P(sol) polarization free energy of solvation -27.153 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.101 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.971 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds