Wall clock time and date at job start Sat Mar 6 2021 17:15:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.46500 * 119.99903 * 2 1 4 4 C 1.53003 * 109.47253 * 270.00191 * 3 2 1 5 5 H 1.08991 * 112.84986 * 316.19509 * 4 3 2 6 6 C 1.54053 * 113.61562 * 87.50583 * 4 3 2 7 7 C 1.53780 * 86.98399 * 139.98036 * 6 4 3 8 8 H 1.09003 * 113.61625 * 89.15503 * 7 6 4 9 9 O 1.42897 * 113.61646 * 219.98044 * 7 6 4 10 10 C 1.53778 * 113.61370 * 184.99640 * 4 3 2 11 11 C 1.34773 * 120.00425 * 180.02562 * 2 1 3 12 12 O 1.21610 * 120.00676 * 175.55357 * 11 2 1 13 13 C 1.47384 * 119.99736 * 355.55591 * 11 2 1 14 14 C 1.36410 * 127.19279 * 215.39117 * 13 11 2 15 15 C 1.50696 * 125.80414 * 0.02562 * 14 13 11 16 16 O 1.42897 * 109.47404 * 89.99310 * 15 14 13 17 17 C 1.35899 * 116.99961 * 180.02562 * 16 15 14 18 18 C 1.38729 * 120.05754 * 359.72842 * 17 16 15 19 19 C 1.38144 * 119.94250 * 179.74146 * 18 17 16 20 20 C 1.38270 * 120.05899 * 0.51004 * 19 18 17 21 21 C 1.50701 * 119.94776 * 179.74264 * 20 19 18 22 22 O 1.42903 * 109.47091 * 245.02780 * 21 20 19 23 23 Si 1.86303 * 109.46928 * 5.02344 * 21 20 19 24 24 C 1.38262 * 120.10575 * 359.76737 * 20 19 18 25 25 C 1.38141 * 120.06109 * 359.97438 * 24 20 19 26 26 O 1.33651 * 108.39724 * 179.97438 * 14 13 11 27 27 C 1.34216 * 110.90866 * 0.02562 * 26 14 13 28 28 C 1.34176 * 109.12191 * 359.69836 * 27 26 14 29 29 H 1.08990 * 109.47601 * 95.36012 * 1 2 3 30 30 H 1.09007 * 109.46813 * 215.36615 * 1 2 3 31 31 H 1.09004 * 109.47179 * 335.35924 * 1 2 3 32 32 H 1.09004 * 109.47224 * 149.99737 * 3 2 1 33 33 H 1.09004 * 109.47197 * 30.00615 * 3 2 1 34 34 H 1.09000 * 113.61550 * 25.47475 * 6 4 3 35 35 H 1.08998 * 113.69116 * 254.49021 * 6 4 3 36 36 H 0.96704 * 113.99732 * 279.13471 * 9 7 6 37 37 H 1.09002 * 113.60882 * 105.47069 * 10 4 3 38 38 H 1.09000 * 113.69790 * 334.58433 * 10 4 3 39 39 H 1.09003 * 109.47545 * 209.99711 * 15 14 13 40 40 H 1.09000 * 109.47032 * 329.99291 * 15 14 13 41 41 H 1.08001 * 120.02771 * 359.97438 * 18 17 16 42 42 H 1.08007 * 119.97494 * 180.23298 * 19 18 17 43 43 H 1.08991 * 109.47006 * 125.01906 * 21 20 19 44 44 H 0.96696 * 114.00057 * 59.99800 * 22 21 20 45 45 H 1.48499 * 109.99983 * 179.97438 * 23 21 20 46 46 H 1.48503 * 110.00122 * 301.31787 * 23 21 20 47 47 H 1.08004 * 119.96789 * 179.97438 * 24 20 19 48 48 H 1.07996 * 120.03029 * 179.97438 * 25 24 20 49 49 H 1.08000 * 125.43504 * 180.02562 * 27 26 14 50 50 H 1.08002 * 127.01810 * 180.27268 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2687 0.0000 4 6 2.4524 1.7105 -1.4425 5 1 2.7834 0.8932 -2.0832 6 6 1.3050 2.5436 -2.0448 7 6 2.3900 3.4193 -2.6934 8 1 2.7031 3.0697 -3.6772 9 8 2.0875 4.8158 -2.6711 10 6 3.3230 2.9730 -1.5554 11 6 2.1389 -1.1671 -0.0005 12 8 3.3523 -1.1687 -0.0822 13 6 1.4054 -2.4417 0.0978 14 6 1.8032 -3.5742 0.7458 15 6 3.0942 -3.7492 1.5032 16 8 2.9008 -3.3719 2.8678 17 6 3.9757 -3.4707 3.6935 18 6 5.1900 -3.9269 3.2017 19 6 6.2825 -4.0213 4.0419 20 6 6.1638 -3.6717 5.3744 21 6 7.3557 -3.7812 6.2900 22 8 7.1016 -4.7739 7.2860 23 14 8.8573 -4.2656 5.2994 24 6 4.9531 -3.2222 5.8682 25 6 3.8589 -3.1209 5.0310 26 8 0.8529 -4.5019 0.5957 27 6 -0.1693 -4.0270 -0.1330 28 6 0.0891 -2.7560 -0.4767 29 1 -0.3634 -0.0960 -1.0230 30 1 -0.3633 -0.8381 0.5949 31 1 -0.3634 0.9341 0.4285 32 1 3.1499 1.1384 0.5139 33 1 1.6084 2.0284 0.5139 34 1 0.7084 3.0685 -1.2988 35 1 0.6976 1.9959 -2.7653 36 1 1.4825 5.0983 -3.3706 37 1 4.3436 2.7719 -1.8810 38 1 3.2782 3.6161 -0.6764 39 1 3.4050 -4.7929 1.4553 40 1 3.8648 -3.1199 1.0579 41 1 5.2822 -4.2043 2.1620 42 1 7.2292 -4.3728 3.6587 43 1 7.5331 -2.8198 6.7720 44 1 6.9347 -5.6565 6.9281 45 1 10.0398 -4.3764 6.1908 46 1 8.6163 -5.5595 4.6115 47 1 4.8627 -2.9501 6.9095 48 1 2.9134 -2.7702 5.4173 49 1 -1.0601 -4.5782 -0.3959 50 1 -0.5402 -2.0991 -1.0587 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12312124_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:15:41 Heat of formation + Delta-G solvation = -64.770575 kcal Electronic energy + Delta-G solvation = -33905.311488 eV Core-core repulsion = 29254.047778 eV Total energy + Delta-G solvation = -4651.263710 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -43.74823 -41.35226 -41.11006 -39.92525 -39.30428 -37.34434 -36.92391 -35.73051 -34.09694 -32.90711 -32.02547 -31.44072 -29.80173 -28.23632 -27.23806 -26.67014 -26.19297 -24.69605 -23.84960 -23.22220 -22.43910 -21.97178 -20.55619 -20.14559 -19.55370 -18.76819 -18.48794 -18.32961 -17.71644 -17.43588 -17.18611 -16.97650 -16.81470 -16.54146 -16.36864 -16.15194 -16.04142 -15.68022 -15.36377 -15.10553 -14.80676 -14.71039 -14.54611 -14.43977 -14.37391 -13.95187 -13.84803 -13.69582 -13.49789 -13.42895 -13.30751 -13.12213 -12.95184 -12.71736 -12.39046 -12.34865 -12.17392 -12.10915 -11.76405 -11.64767 -11.27519 -11.22477 -10.82478 -10.76872 -10.60655 -10.08953 -9.93456 -9.67479 -9.30757 -4.92626 0.02441 0.22010 0.25695 1.04561 1.30770 1.46647 1.57657 1.85008 1.93379 1.94619 2.39044 2.59519 3.29520 3.33103 3.40677 3.42977 3.54694 3.61136 3.65700 3.70949 3.77288 3.81496 3.86904 3.91469 3.95886 4.04267 4.16295 4.25439 4.31313 4.34584 4.38654 4.44728 4.49649 4.52291 4.61410 4.66163 4.67030 4.76716 4.79989 4.80639 4.81804 4.88006 4.92284 4.99541 5.10362 5.12658 5.21332 5.26006 5.34707 5.44020 5.52077 5.64170 5.89146 6.19504 6.22312 6.48656 6.88501 6.97518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.600 5.600 3 C 0.128 3.872 4 C -0.116 4.116 5 H 0.079 0.921 6 C -0.149 4.149 7 C 0.073 3.927 8 H 0.088 0.912 9 O -0.580 6.580 10 C -0.128 4.128 11 C 0.581 3.419 12 O -0.572 6.572 13 C -0.216 4.216 14 C 0.032 3.968 15 C 0.132 3.868 16 O -0.324 6.324 17 C 0.121 3.879 18 C -0.207 4.207 19 C -0.078 4.078 20 C -0.155 4.155 21 C -0.076 4.076 22 O -0.548 6.548 23 Si 0.760 3.240 24 C -0.057 4.057 25 C -0.159 4.159 26 O -0.178 6.178 27 C -0.010 4.010 28 C -0.198 4.198 29 H 0.076 0.924 30 H 0.078 0.922 31 H 0.090 0.910 32 H 0.066 0.934 33 H 0.101 0.899 34 H 0.095 0.905 35 H 0.078 0.922 36 H 0.394 0.606 37 H 0.070 0.930 38 H 0.089 0.911 39 H 0.101 0.899 40 H 0.106 0.894 41 H 0.145 0.855 42 H 0.147 0.853 43 H 0.125 0.875 44 H 0.386 0.614 45 H -0.302 1.302 46 H -0.281 1.281 47 H 0.142 0.858 48 H 0.136 0.864 49 H 0.253 0.747 50 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.205 0.907 -4.686 7.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 N -0.331 5.331 3 C 0.006 3.994 4 C -0.135 4.135 5 H 0.098 0.902 6 C -0.186 4.186 7 C 0.014 3.986 8 H 0.105 0.895 9 O -0.389 6.389 10 C -0.166 4.166 11 C 0.371 3.629 12 O -0.453 6.453 13 C -0.221 4.221 14 C -0.020 4.020 15 C 0.058 3.942 16 O -0.238 6.238 17 C 0.077 3.923 18 C -0.225 4.225 19 C -0.096 4.096 20 C -0.156 4.156 21 C -0.185 4.185 22 O -0.356 6.356 23 Si 0.666 3.334 24 C -0.075 4.075 25 C -0.178 4.178 26 O -0.073 6.073 27 C -0.075 4.075 28 C -0.217 4.217 29 H 0.095 0.905 30 H 0.097 0.903 31 H 0.109 0.891 32 H 0.085 0.915 33 H 0.120 0.880 34 H 0.113 0.887 35 H 0.096 0.904 36 H 0.244 0.756 37 H 0.089 0.911 38 H 0.108 0.892 39 H 0.119 0.881 40 H 0.124 0.876 41 H 0.163 0.837 42 H 0.164 0.836 43 H 0.143 0.857 44 H 0.235 0.765 45 H -0.230 1.230 46 H -0.207 1.207 47 H 0.160 0.840 48 H 0.154 0.846 49 H 0.269 0.731 50 H 0.207 0.793 Dipole moment (debyes) X Y Z Total from point charges -4.690 0.618 -3.792 6.063 hybrid contribution -0.863 -0.900 -0.274 1.277 sum -5.553 -0.282 -4.066 6.888 Atomic orbital electron populations 1.22313 0.77149 1.04667 1.03222 1.47703 1.08527 1.04957 1.71892 1.21563 0.97427 0.84152 0.96231 1.22602 0.97976 0.96151 0.96803 0.90246 1.23719 0.96576 0.97493 1.00859 1.23377 0.96419 0.80662 0.98147 0.89455 1.86491 1.69981 1.24348 1.58036 1.23083 0.98375 0.95953 0.99166 1.17568 0.86104 0.83602 0.75676 1.90759 1.14931 1.87692 1.51920 1.21322 0.98524 0.94441 1.07788 1.21907 0.91711 0.87407 1.00987 1.21149 0.90700 1.03274 0.79062 1.86052 1.35002 1.82706 1.20082 1.19192 0.86303 0.96311 0.90542 1.21416 0.92578 1.06612 1.01901 1.21050 0.98521 0.97304 0.92677 1.20278 0.96555 1.04033 0.94736 1.25128 1.02464 0.96055 0.94863 1.86568 1.92476 1.21916 1.34685 0.94063 0.73637 0.84930 0.80767 1.20979 0.90983 0.95601 0.99898 1.20643 1.00891 1.05557 0.90706 1.83783 1.25550 1.40137 1.57873 1.24930 0.91906 0.95298 0.95388 1.23339 0.94778 0.97692 1.05857 0.90549 0.90316 0.89128 0.91510 0.88048 0.88680 0.90376 0.75572 0.91109 0.89234 0.88102 0.87617 0.83685 0.83567 0.85719 0.76528 1.23008 1.20705 0.84035 0.84597 0.73128 0.79349 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.41 9.07 127.77 1.16 0.75 16 2 N -0.60 -0.77 2.87 -850.71 -2.44 -3.22 16 3 C 0.13 0.09 5.25 86.38 0.45 0.55 16 4 C -0.12 0.01 3.97 -10.17 -0.04 -0.03 16 5 H 0.08 0.28 8.14 -2.39 -0.02 0.26 16 6 C -0.15 0.53 7.48 31.21 0.23 0.77 16 7 C 0.07 -0.07 5.20 31.12 0.16 0.10 16 8 H 0.09 -0.22 8.14 -2.39 -0.02 -0.24 16 9 O -0.58 -0.60 13.67 -148.98 -2.04 -2.63 16 10 C -0.13 -0.12 7.47 31.12 0.23 0.11 16 11 C 0.58 4.27 7.49 86.65 0.65 4.92 16 12 O -0.57 -7.94 15.09 -4.06 -0.06 -8.01 16 13 C -0.22 -0.95 5.54 -18.99 -0.11 -1.05 16 14 C 0.03 0.17 7.00 25.26 0.18 0.35 16 15 C 0.13 0.66 5.07 71.23 0.36 1.02 16 16 O -0.32 -2.64 10.12 -92.41 -0.94 -3.58 16 17 C 0.12 0.79 6.69 22.51 0.15 0.94 16 18 C -0.21 -0.72 9.04 22.36 0.20 -0.52 16 19 C -0.08 -0.12 8.66 22.26 0.19 0.07 16 20 C -0.16 -0.34 5.35 -19.85 -0.11 -0.45 16 21 C -0.08 -0.06 2.80 71.24 0.20 0.14 16 22 O -0.55 -2.00 12.83 -148.98 -1.91 -3.91 16 23 Si 0.76 -0.46 29.88 68.60 2.05 1.59 16 24 C -0.06 -0.19 9.68 22.25 0.22 0.02 16 25 C -0.16 -0.84 9.99 22.37 0.22 -0.62 16 26 O -0.18 -0.48 10.52 4.47 0.05 -0.43 16 27 C -0.01 0.04 12.03 66.89 0.80 0.85 16 28 C -0.20 0.61 8.78 23.65 0.21 0.82 16 29 H 0.08 -0.70 7.36 -2.39 -0.02 -0.72 16 30 H 0.08 -0.44 5.81 -2.38 -0.01 -0.45 16 31 H 0.09 -0.80 7.83 -2.38 -0.02 -0.82 16 32 H 0.07 0.35 7.49 -2.38 -0.02 0.33 16 33 H 0.10 -0.34 7.56 -2.38 -0.02 -0.36 16 34 H 0.09 -0.40 7.90 -2.39 -0.02 -0.41 16 35 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 36 H 0.39 -2.86 9.12 -74.05 -0.68 -3.54 16 37 H 0.07 0.13 8.14 -2.39 -0.02 0.11 16 38 H 0.09 0.14 8.10 -2.39 -0.02 0.12 16 39 H 0.10 0.08 7.65 -2.39 -0.02 0.06 16 40 H 0.11 0.68 6.10 -2.39 -0.01 0.67 16 41 H 0.15 0.01 6.30 -2.91 -0.02 0.00 16 42 H 0.15 -0.36 4.83 -2.91 -0.01 -0.37 16 43 H 0.13 -0.11 7.96 -2.39 -0.02 -0.13 16 44 H 0.39 -0.70 8.70 -74.06 -0.64 -1.34 16 45 H -0.30 -2.10 7.11 99.48 0.71 -1.40 16 46 H -0.28 -0.75 7.01 99.48 0.70 -0.05 16 47 H 0.14 0.16 8.06 -2.91 -0.02 0.13 16 48 H 0.14 0.50 8.06 -2.91 -0.02 0.47 16 49 H 0.25 -3.42 8.06 -2.91 -0.02 -3.44 16 50 H 0.19 -1.71 6.40 -2.91 -0.02 -1.73 16 Total: 0.00 -24.53 411.52 -0.21 -24.74 By element: Atomic # 1 Polarization: -13.00 SS G_CDS: -0.29 Total: -13.29 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: 5.37 Total: 8.74 kcal Atomic # 7 Polarization: -0.77 SS G_CDS: -2.44 Total: -3.22 kcal Atomic # 8 Polarization: -13.66 SS G_CDS: -4.90 Total: -18.56 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: 2.05 Total: 1.59 kcal Total: -24.53 -0.21 -24.74 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.033 kcal (2) G-P(sol) polarization free energy of solvation -24.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.558 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.738 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.771 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds