Wall clock time and date at job start Sat Mar 6 2021 17:16:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35981 * 116.99691 * 2 1 4 4 C 1.38673 * 120.00239 * 179.97438 * 3 2 1 5 5 C 1.38157 * 120.00340 * 179.97438 * 4 3 2 6 6 C 1.50700 * 120.00077 * 180.02562 * 5 4 3 7 7 O 1.42904 * 109.46816 * 254.98223 * 6 5 4 8 8 Si 1.86294 * 109.47024 * 14.97769 * 6 5 4 9 9 C 1.38674 * 119.99810 * 0.02562 * 5 4 3 10 10 O 1.35981 * 119.99911 * 179.97438 * 9 5 4 11 11 C 1.42899 * 117.00055 * 180.02562 * 10 9 5 12 12 C 1.50700 * 109.47247 * 179.97438 * 11 10 9 13 13 O 1.21275 * 119.99805 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00084 * 179.97438 * 12 11 10 15 15 C 1.46507 * 120.00025 * 0.02562 * 14 12 11 16 16 C 1.46494 * 120.00280 * 180.02562 * 14 12 11 17 17 C 1.52998 * 109.47484 * 89.99669 * 16 14 12 18 18 H 1.09000 * 112.85012 * 314.67284 * 17 16 14 19 19 C 1.53783 * 113.61240 * 85.86473 * 17 16 14 20 20 C 1.53953 * 87.01960 * 139.95231 * 19 17 16 21 21 H 1.09001 * 113.53767 * 89.19091 * 20 19 17 22 22 O 1.42898 * 113.66703 * 220.06752 * 20 19 17 23 23 C 1.53781 * 113.61571 * 183.47273 * 17 16 14 24 24 C 1.38723 * 120.00087 * 0.02562 * 9 5 4 25 25 C 1.38108 * 119.99987 * 0.23661 * 24 9 5 26 26 H 1.08999 * 109.47213 * 59.99613 * 1 2 3 27 27 H 1.09002 * 109.46532 * 179.97438 * 1 2 3 28 28 H 1.08991 * 109.47011 * 299.99386 * 1 2 3 29 29 H 1.08001 * 120.00051 * 0.02889 * 4 3 2 30 30 H 1.08999 * 109.47030 * 134.98124 * 6 5 4 31 31 H 0.96709 * 113.99885 * 180.02562 * 7 6 5 32 32 H 1.48496 * 110.00623 * 299.99972 * 8 6 5 33 33 H 1.48506 * 110.00146 * 61.32333 * 8 6 5 34 34 H 1.09000 * 109.47367 * 299.99890 * 11 10 9 35 35 H 1.08997 * 109.47388 * 59.99809 * 11 10 9 36 36 H 1.09001 * 109.46787 * 89.99654 * 15 14 12 37 37 H 1.08998 * 109.46823 * 210.00094 * 15 14 12 38 38 H 1.09000 * 109.46710 * 330.00050 * 15 14 12 39 39 H 1.08994 * 109.47668 * 210.00270 * 16 14 12 40 40 H 1.09009 * 109.46820 * 329.99963 * 16 14 12 41 41 H 1.08996 * 113.61553 * 254.53547 * 19 17 16 42 42 H 1.09002 * 113.61239 * 25.43442 * 19 17 16 43 43 H 0.96703 * 114.00123 * 277.56025 * 22 20 19 44 44 H 1.08997 * 113.61695 * 334.56700 * 23 17 16 45 45 H 1.08998 * 113.61549 * 105.39456 * 23 17 16 46 46 H 1.08002 * 119.99739 * 179.97438 * 24 9 5 47 47 H 1.07998 * 120.00335 * 179.72327 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4311 1.2843 0.0005 5 6 4.0583 2.5154 0.0000 6 6 5.5632 2.5943 0.0000 7 8 6.0205 2.9685 1.3012 8 14 6.2722 0.9322 -0.4532 9 6 3.3029 3.6783 -0.0005 10 8 3.9202 4.8900 -0.0005 11 6 3.0802 6.0460 -0.0005 12 6 3.9343 7.2876 0.0001 13 8 5.1433 7.1919 0.0010 14 7 3.3547 8.5043 -0.0003 15 6 1.8942 8.6199 -0.0008 16 6 4.1849 9.7113 -0.0003 17 6 4.4745 10.1312 -1.4427 18 1 4.7659 9.2940 -2.0769 19 6 3.3789 11.0179 -2.0579 20 6 4.5139 11.8345 -2.7021 21 1 4.8153 11.4636 -3.6817 22 8 4.2852 13.2450 -2.6878 23 6 5.4128 11.3445 -1.5545 24 6 1.9176 3.6056 0.0000 25 6 1.2907 2.3751 0.0060 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3632 -1.0277 -0.0005 28 1 -0.3633 0.5137 0.8900 29 1 4.0194 0.3786 0.0005 30 1 5.8880 3.3384 -0.7272 31 1 6.9822 3.0392 1.3748 32 1 5.8368 -0.0912 0.5307 33 1 5.8298 0.5461 -1.8172 34 1 2.4510 6.0379 -0.8905 35 1 2.4509 6.0379 0.8894 36 1 1.5317 8.6487 1.0268 37 1 1.6024 9.5357 -0.5149 38 1 1.4620 7.7613 -0.5146 39 1 3.6575 10.5151 0.5132 40 1 5.1240 9.5063 0.5140 41 1 2.7502 10.4972 -2.7801 42 1 2.8037 11.5766 -1.3196 43 1 3.7206 13.5593 -3.4072 44 1 5.3946 11.9928 -0.6784 45 1 6.4239 11.0870 -1.8696 46 1 1.3294 4.5114 0.0000 47 1 0.2122 2.3184 0.0109 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:16:04 Heat of formation + Delta-G solvation = -115.340621 kcal Electronic energy + Delta-G solvation = -29636.359236 eV Core-core repulsion = 25367.581065 eV Total energy + Delta-G solvation = -4268.778170 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.80714 -41.18644 -40.25811 -39.63087 -37.99062 -36.97332 -36.76992 -35.70541 -32.91213 -31.41124 -30.39503 -28.87427 -28.09078 -27.20240 -26.74725 -26.49797 -24.09163 -23.16846 -22.25539 -20.68371 -20.38468 -19.45273 -18.69688 -18.55263 -18.25538 -18.17410 -17.55231 -17.53420 -17.10586 -16.71770 -16.50096 -16.00108 -15.91832 -15.52217 -15.40551 -15.15992 -15.02878 -14.75773 -14.37740 -14.19048 -14.03482 -13.81253 -13.71312 -13.67049 -13.48569 -13.47713 -13.22690 -13.01412 -12.84549 -12.60023 -12.53694 -12.42093 -11.85183 -11.80290 -11.70469 -11.47326 -11.35195 -10.91138 -10.74648 -10.14882 -10.06805 -9.79098 -8.77909 -4.87601 0.05794 0.38859 1.39297 1.39848 1.48520 1.74405 2.06432 2.23507 2.41717 2.55122 3.17169 3.26595 3.46855 3.49485 3.51662 3.63834 3.68347 3.75018 3.85504 3.86500 3.87483 3.94805 4.01337 4.07849 4.14935 4.16029 4.18418 4.23068 4.32610 4.36957 4.46271 4.48779 4.53246 4.59431 4.64180 4.66299 4.69506 4.78555 4.91935 5.03458 5.05085 5.13076 5.19167 5.24907 5.40963 5.44236 6.08635 6.22715 6.40482 6.65007 6.83529 7.04829 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.317 6.317 3 C 0.100 3.900 4 C -0.116 4.116 5 C -0.062 4.062 6 C -0.061 4.061 7 O -0.540 6.540 8 Si 0.682 3.318 9 C 0.119 3.881 10 O -0.277 6.277 11 C 0.041 3.959 12 C 0.517 3.483 13 O -0.507 6.507 14 N -0.613 5.613 15 C 0.071 3.929 16 C 0.129 3.871 17 C -0.124 4.124 18 H 0.095 0.905 19 C -0.165 4.165 20 C 0.076 3.924 21 H 0.081 0.919 22 O -0.560 6.560 23 C -0.121 4.121 24 C -0.170 4.170 25 C -0.160 4.160 26 H 0.056 0.944 27 H 0.103 0.897 28 H 0.056 0.944 29 H 0.138 0.862 30 H 0.078 0.922 31 H 0.381 0.619 32 H -0.248 1.248 33 H -0.254 1.254 34 H 0.091 0.909 35 H 0.092 0.908 36 H 0.062 0.938 37 H 0.079 0.921 38 H 0.070 0.930 39 H 0.083 0.917 40 H 0.090 0.910 41 H 0.068 0.932 42 H 0.090 0.910 43 H 0.379 0.621 44 H 0.093 0.907 45 H 0.077 0.923 46 H 0.135 0.865 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.730 1.974 -2.067 5.526 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.230 6.230 3 C 0.054 3.946 4 C -0.134 4.134 5 C -0.063 4.063 6 C -0.172 4.172 7 O -0.346 6.346 8 Si 0.583 3.417 9 C 0.074 3.926 10 O -0.189 6.189 11 C -0.038 4.038 12 C 0.303 3.697 13 O -0.380 6.380 14 N -0.349 5.349 15 C -0.072 4.072 16 C 0.007 3.993 17 C -0.144 4.144 18 H 0.114 0.886 19 C -0.203 4.203 20 C 0.017 3.983 21 H 0.099 0.901 22 O -0.365 6.365 23 C -0.159 4.159 24 C -0.188 4.188 25 C -0.179 4.179 26 H 0.075 0.925 27 H 0.121 0.879 28 H 0.075 0.925 29 H 0.155 0.845 30 H 0.096 0.904 31 H 0.229 0.771 32 H -0.173 1.173 33 H -0.178 1.178 34 H 0.109 0.891 35 H 0.110 0.890 36 H 0.081 0.919 37 H 0.098 0.902 38 H 0.089 0.911 39 H 0.102 0.898 40 H 0.108 0.892 41 H 0.086 0.914 42 H 0.108 0.892 43 H 0.226 0.774 44 H 0.111 0.889 45 H 0.096 0.904 46 H 0.152 0.848 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -4.220 0.891 -1.636 4.613 hybrid contribution -1.667 0.631 -0.576 1.873 sum -5.886 1.522 -2.212 6.470 Atomic orbital electron populations 1.23101 0.77995 1.04370 1.01383 1.86104 1.21635 1.26275 1.89036 1.18713 0.91703 0.84640 0.99497 1.20084 0.92023 0.96937 1.04361 1.18407 0.94077 0.89799 1.03991 1.24497 0.92420 1.10873 0.89408 1.86497 1.27178 1.92547 1.28349 0.95329 0.90617 0.75709 0.80012 1.18584 0.90470 0.84890 0.98689 1.86221 1.33318 1.10722 1.88659 1.22516 0.93264 0.84491 1.03548 1.19995 0.88652 0.83974 0.77094 1.90774 1.14029 1.86110 1.47107 1.47720 1.07324 1.05427 1.74427 1.21936 0.79191 1.03636 1.02432 1.21499 0.96296 0.85510 0.95976 1.22722 0.97348 0.97008 0.97292 0.88640 1.23815 0.97257 0.98300 1.00907 1.23351 0.96278 0.80633 0.98082 0.90078 1.86539 1.72983 1.22215 1.54809 1.23049 0.98272 0.95776 0.98792 1.21044 0.92868 0.98673 1.06251 1.21077 1.00304 0.91417 1.05126 0.92537 0.87904 0.92493 0.84516 0.90416 0.77130 1.17334 1.17819 0.89140 0.88999 0.91898 0.90234 0.91100 0.89819 0.89160 0.91365 0.89162 0.77400 0.88860 0.90414 0.84766 0.84579 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.32 -1.02 10.50 -19.68 -0.21 -1.22 16 3 C 0.10 0.36 6.69 -39.24 -0.26 0.09 16 4 C -0.12 -0.52 8.59 -39.45 -0.34 -0.86 16 5 C -0.06 -0.28 5.30 -104.49 -0.55 -0.83 16 6 C -0.06 -0.18 2.36 36.01 0.09 -0.09 16 7 O -0.54 -1.81 12.86 -35.23 -0.45 -2.27 16 8 Si 0.68 0.63 30.20 -169.99 -5.13 -4.50 16 9 C 0.12 0.45 6.66 -39.24 -0.26 0.19 16 10 O -0.28 -1.16 9.00 -39.59 -0.36 -1.52 16 11 C 0.04 0.01 3.77 36.01 0.14 0.15 16 12 C 0.52 1.17 7.75 -10.99 -0.09 1.08 16 13 O -0.51 -3.38 16.08 -14.35 -0.23 -3.61 16 14 N -0.61 0.41 2.87 -181.57 -0.52 -0.11 16 15 C 0.07 -0.29 10.24 59.85 0.61 0.32 16 16 C 0.13 -0.07 5.23 -4.05 -0.02 -0.09 16 17 C -0.12 0.09 3.96 -89.81 -0.36 -0.27 16 18 H 0.10 0.07 8.14 -51.93 -0.42 -0.35 16 19 C -0.17 0.30 6.96 -25.83 -0.18 0.12 16 20 C 0.08 -0.05 5.21 -25.83 -0.13 -0.18 16 21 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 22 O -0.56 -0.28 13.67 -35.23 -0.48 -0.76 16 23 C -0.12 0.02 7.48 -25.92 -0.19 -0.17 16 24 C -0.17 -0.22 9.03 -39.45 -0.36 -0.58 16 25 C -0.16 -0.23 9.03 -39.45 -0.36 -0.59 16 26 H 0.06 -0.12 7.67 -51.93 -0.40 -0.52 16 27 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 28 H 0.06 -0.11 7.65 -51.93 -0.40 -0.51 16 29 H 0.14 0.60 4.90 -52.49 -0.26 0.34 16 30 H 0.08 0.20 7.82 -51.93 -0.41 -0.20 16 31 H 0.38 -0.60 8.74 45.56 0.40 -0.20 16 32 H -0.25 -0.88 6.75 56.52 0.38 -0.49 16 33 H -0.25 -0.82 7.11 56.52 0.40 -0.42 16 34 H 0.09 -0.21 6.92 -51.93 -0.36 -0.57 16 35 H 0.09 -0.16 7.62 -51.93 -0.40 -0.56 16 36 H 0.06 -0.30 8.14 -51.93 -0.42 -0.72 16 37 H 0.08 -0.38 7.54 -51.93 -0.39 -0.78 16 38 H 0.07 -0.39 6.44 -51.93 -0.33 -0.72 16 39 H 0.08 -0.18 7.80 -51.93 -0.41 -0.58 16 40 H 0.09 0.11 7.42 -51.92 -0.39 -0.27 16 41 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 42 H 0.09 -0.17 7.92 -51.93 -0.41 -0.58 16 43 H 0.38 -1.33 9.12 45.56 0.42 -0.91 16 44 H 0.09 0.01 8.10 -51.93 -0.42 -0.41 16 45 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 46 H 0.13 -0.26 6.29 -52.49 -0.33 -0.59 16 47 H 0.14 -0.17 6.29 -52.49 -0.33 -0.50 16 LS Contribution 384.22 15.07 5.79 5.79 Total: 0.00 -11.70 384.22 -9.03 -20.73 By element: Atomic # 1 Polarization: -5.62 SS G_CDS: -6.16 Total: -11.78 kcal Atomic # 6 Polarization: 0.52 SS G_CDS: -1.27 Total: -0.75 kcal Atomic # 7 Polarization: 0.41 SS G_CDS: -0.52 Total: -0.11 kcal Atomic # 8 Polarization: -7.64 SS G_CDS: -1.73 Total: -9.37 kcal Atomic # 14 Polarization: 0.63 SS G_CDS: -5.13 Total: -4.50 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -11.70 -9.03 -20.73 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.611 kcal (2) G-P(sol) polarization free energy of solvation -11.700 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.311 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.730 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds