Wall clock time and date at job start Sat Mar 6 2021 17:16:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35987 * 117.00413 * 2 1 4 4 C 1.39153 * 120.07144 * 179.97438 * 3 2 1 5 5 O 1.35992 * 120.07296 * 359.97438 * 4 3 2 6 6 C 1.42907 * 117.00005 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47118 * 180.02562 * 6 5 4 8 8 O 1.21280 * 119.99840 * 359.97438 * 7 6 5 9 9 N 1.34774 * 119.99667 * 180.02562 * 7 6 5 10 10 C 1.46497 * 120.00144 * 359.97438 * 9 7 6 11 11 C 1.46502 * 119.99831 * 179.97438 * 9 7 6 12 12 C 1.53000 * 109.47212 * 89.99608 * 11 9 7 13 13 H 1.08992 * 112.85502 * 45.33359 * 12 11 9 14 14 C 1.53782 * 113.61495 * 176.53297 * 12 11 9 15 15 C 1.53779 * 87.08550 * 139.97940 * 14 12 11 16 16 H 1.08995 * 113.61511 * 89.10985 * 15 14 12 17 17 O 1.42898 * 113.61559 * 220.02067 * 15 14 12 18 18 C 1.53788 * 113.61346 * 274.13672 * 12 11 9 19 19 C 1.38563 * 119.85224 * 180.02562 * 4 3 2 20 20 C 1.38245 * 120.00301 * 359.72280 * 19 4 3 21 21 C 1.38261 * 120.14178 * 0.54753 * 20 19 4 22 22 C 1.50699 * 119.92538 * 179.72723 * 21 20 19 23 23 O 1.42892 * 109.47249 * 119.73101 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 359.72486 * 22 21 20 25 25 C 1.38242 * 120.14400 * 359.45608 * 21 20 19 26 26 H 1.08999 * 109.46938 * 300.00589 * 1 2 3 27 27 H 1.09000 * 109.46817 * 59.99582 * 1 2 3 28 28 H 1.08995 * 109.47739 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.46820 * 300.00532 * 6 5 4 30 30 H 1.08998 * 109.47063 * 60.00104 * 6 5 4 31 31 H 1.09000 * 109.47106 * 90.00886 * 10 9 7 32 32 H 1.09005 * 109.46936 * 210.00250 * 10 9 7 33 33 H 1.08994 * 109.47422 * 330.00645 * 10 9 7 34 34 H 1.08999 * 109.47420 * 209.99574 * 11 9 7 35 35 H 1.09001 * 109.47056 * 329.99831 * 11 9 7 36 36 H 1.09000 * 113.61326 * 254.52862 * 14 12 11 37 37 H 1.09004 * 113.61585 * 25.34477 * 14 12 11 38 38 H 0.96697 * 114.00305 * 180.02562 * 17 15 14 39 39 H 1.09002 * 113.61122 * 334.56539 * 18 12 11 40 40 H 1.08988 * 113.61419 * 105.47052 * 18 12 11 41 41 H 1.08005 * 120.00453 * 179.97438 * 19 4 3 42 42 H 1.07999 * 119.93162 * 180.27366 * 20 19 4 43 43 H 1.09004 * 109.46453 * 239.73169 * 22 21 20 44 44 H 0.96703 * 114.00176 * 299.99748 * 23 22 21 45 45 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 46 46 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 47 47 H 1.08001 * 119.99775 * 180.25292 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 3.4360 1.2861 0.0005 5 8 4.1795 0.1474 0.0016 6 6 5.6003 0.3002 0.0027 7 6 6.2518 -1.0587 0.0031 8 8 5.5667 -2.0595 0.0030 9 7 7.5956 -1.1617 0.0046 10 6 8.4229 0.0472 0.0053 11 6 8.2289 -2.4828 0.0056 12 6 8.4509 -2.9431 -1.4365 13 1 8.8689 -2.1614 -2.0707 14 6 9.1898 -4.2871 -1.5474 15 6 8.2268 -4.6324 -2.6955 16 1 8.5827 -4.3129 -3.6749 17 8 7.7823 -5.9904 -2.6810 18 6 7.2315 -3.6495 -2.0523 19 6 4.0604 2.5230 0.0011 20 6 3.3032 3.6796 -0.0047 21 6 1.9226 3.6056 0.0004 22 6 1.1020 4.8696 0.0002 23 8 0.2781 4.9025 -1.1668 24 14 2.2370 6.3469 0.0011 25 6 1.2934 2.3747 -0.0001 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 5.9073 0.8497 -0.8873 30 1 5.9059 0.8503 0.8927 31 1 8.6271 0.3472 1.0331 32 1 9.3632 -0.1557 -0.5075 33 1 7.8943 0.8496 -0.5092 34 1 9.1879 -2.4256 0.5204 35 1 7.5828 -3.1950 0.5189 36 1 10.2285 -4.1896 -1.8632 37 1 9.0721 -4.9238 -0.6705 38 1 7.1766 -6.2138 -3.4009 39 1 6.5762 -4.1122 -1.3143 40 1 6.6916 -3.0380 -2.7751 41 1 5.1388 2.5837 0.0019 42 1 3.7911 4.6431 -0.0088 43 1 0.4729 4.8943 0.8901 44 1 0.7722 4.8830 -1.9978 45 1 3.1221 6.3080 -1.1908 46 1 1.4399 7.5998 0.0016 47 1 0.2148 2.3197 -0.0002 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:16:13 Heat of formation + Delta-G solvation = -116.900504 kcal Electronic energy + Delta-G solvation = -29636.123258 eV Core-core repulsion = 25367.277446 eV Total energy + Delta-G solvation = -4268.845812 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.83101 -41.16728 -40.03568 -39.15942 -38.89518 -37.06348 -36.75920 -35.66530 -32.12983 -31.50450 -30.64659 -28.85301 -28.41011 -27.31433 -26.59172 -26.17975 -23.93734 -23.18186 -22.47406 -20.53194 -20.44454 -19.81419 -18.59599 -18.44493 -18.20803 -17.80419 -17.62513 -17.30844 -16.90390 -16.70613 -16.35580 -16.16392 -15.87227 -15.80182 -15.76885 -15.34828 -14.97357 -14.72319 -14.52777 -14.26207 -14.16690 -13.81342 -13.61972 -13.55857 -13.45413 -13.33543 -13.06707 -12.70549 -12.60199 -12.55154 -12.40656 -12.17685 -12.15441 -12.00755 -11.77905 -11.66830 -11.25248 -10.77080 -10.71397 -10.64912 -9.78757 -9.75150 -8.85865 -4.99651 0.16851 0.29151 1.24815 1.40041 1.52375 1.56167 1.92947 2.31525 2.38250 2.56065 3.24949 3.29442 3.32086 3.55429 3.60915 3.65738 3.69025 3.77517 3.81171 3.85774 3.92838 3.95405 3.98292 4.11837 4.18324 4.24630 4.28862 4.29195 4.33892 4.39198 4.47413 4.50563 4.52037 4.56923 4.65035 4.79433 4.83124 4.88880 4.99436 5.06468 5.09465 5.18690 5.33946 5.35866 5.49524 5.55359 5.96187 6.19410 6.36636 6.54382 6.76835 7.09096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.040 3.960 7 C 0.516 3.484 8 O -0.503 6.503 9 N -0.615 5.615 10 C 0.071 3.929 11 C 0.129 3.871 12 C -0.128 4.128 13 H 0.093 0.907 14 C -0.120 4.120 15 C 0.073 3.927 16 H 0.079 0.921 17 O -0.560 6.560 18 C -0.155 4.155 19 C -0.170 4.170 20 C -0.113 4.113 21 C -0.114 4.114 22 C -0.073 4.073 23 O -0.530 6.530 24 Si 0.686 3.314 25 C -0.146 4.146 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.103 0.897 29 H 0.092 0.908 30 H 0.094 0.906 31 H 0.063 0.937 32 H 0.078 0.922 33 H 0.071 0.929 34 H 0.083 0.917 35 H 0.089 0.911 36 H 0.075 0.925 37 H 0.093 0.907 38 H 0.379 0.621 39 H 0.097 0.903 40 H 0.063 0.937 41 H 0.138 0.862 42 H 0.133 0.867 43 H 0.119 0.881 44 H 0.376 0.624 45 H -0.260 1.260 46 H -0.257 1.257 47 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.779 4.588 0.380 6.635 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.190 6.190 6 C -0.038 4.038 7 C 0.302 3.698 8 O -0.376 6.376 9 N -0.351 5.351 10 C -0.072 4.072 11 C 0.007 3.993 12 C -0.148 4.148 13 H 0.111 0.889 14 C -0.158 4.158 15 C 0.014 3.986 16 H 0.097 0.903 17 O -0.366 6.366 18 C -0.193 4.193 19 C -0.189 4.189 20 C -0.131 4.131 21 C -0.114 4.114 22 C -0.182 4.182 23 O -0.337 6.337 24 Si 0.587 3.413 25 C -0.165 4.165 26 H 0.075 0.925 27 H 0.075 0.925 28 H 0.121 0.879 29 H 0.109 0.891 30 H 0.112 0.888 31 H 0.082 0.918 32 H 0.097 0.903 33 H 0.090 0.910 34 H 0.102 0.898 35 H 0.108 0.892 36 H 0.094 0.906 37 H 0.111 0.889 38 H 0.226 0.774 39 H 0.116 0.884 40 H 0.082 0.918 41 H 0.156 0.844 42 H 0.150 0.850 43 H 0.136 0.864 44 H 0.224 0.776 45 H -0.184 1.184 46 H -0.182 1.182 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.569 4.360 0.944 6.385 hybrid contribution -0.632 0.120 -1.673 1.793 sum 3.936 4.480 -0.730 6.008 Atomic orbital electron populations 1.23130 0.78114 1.04406 1.01364 1.86249 1.21333 1.25342 1.88534 1.18282 0.89018 0.85570 1.01051 1.18288 0.88324 0.85796 1.01670 1.86279 1.16158 1.27740 1.88774 1.22542 0.81087 0.96570 1.03640 1.19986 0.82174 0.90488 0.77195 1.90783 1.62066 1.37949 1.46765 1.47730 1.05060 1.07693 1.74619 1.21922 0.96213 0.86574 1.02478 1.21517 0.98248 0.83542 0.96007 1.22738 0.98249 0.96619 0.97167 0.88923 1.23035 0.98187 0.95515 0.99038 1.23388 0.95770 0.81716 0.97754 0.90322 1.86520 1.67519 1.27670 1.54862 1.23729 0.96738 0.97916 1.00872 1.20978 1.00411 0.90689 1.06800 1.20686 0.92849 0.97866 1.01664 1.19983 0.93699 0.95089 1.02675 1.25012 1.00243 1.01808 0.91178 1.86593 1.35612 1.95713 1.15740 0.94993 0.80384 0.76377 0.89513 1.20936 1.00406 0.90395 1.04778 0.92497 0.92548 0.87871 0.89054 0.88847 0.91843 0.90295 0.91048 0.89842 0.89234 0.90635 0.88852 0.77363 0.88422 0.91833 0.84389 0.85008 0.86370 0.77613 1.18436 1.18250 0.84165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.34 10.28 -34.21 -0.35 -1.70 16 3 C 0.11 0.36 6.70 -39.12 -0.26 0.10 16 4 C 0.11 0.29 6.70 -39.12 -0.26 0.03 16 5 O -0.28 -1.14 9.45 -47.34 -0.45 -1.59 16 6 C 0.04 -0.01 3.77 36.00 0.14 0.13 16 7 C 0.52 1.11 7.75 -10.99 -0.09 1.02 16 8 O -0.50 -3.40 15.17 -14.35 -0.22 -3.61 16 9 N -0.62 0.53 2.87 -181.58 -0.52 0.01 16 10 C 0.07 -0.33 10.24 59.85 0.61 0.28 16 11 C 0.13 -0.08 5.23 -4.04 -0.02 -0.10 16 12 C -0.13 0.08 3.96 -89.80 -0.36 -0.28 16 13 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 14 C -0.12 0.02 7.47 -25.92 -0.19 -0.18 16 15 C 0.07 0.06 5.21 -25.83 -0.13 -0.08 16 16 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 17 O -0.56 -1.28 13.67 -35.23 -0.48 -1.76 16 18 C -0.15 -0.24 6.86 -25.82 -0.18 -0.42 16 19 C -0.17 0.05 9.04 -39.46 -0.36 -0.31 16 20 C -0.11 0.08 8.66 -39.57 -0.34 -0.26 16 21 C -0.11 -0.03 5.39 -104.61 -0.56 -0.59 16 22 C -0.07 0.03 2.82 36.01 0.10 0.14 16 23 O -0.53 -0.52 12.77 -35.23 -0.45 -0.97 16 24 Si 0.69 -0.99 29.78 -169.99 -5.06 -6.05 16 25 C -0.15 -0.22 8.60 -39.46 -0.34 -0.56 16 26 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 27 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 28 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.09 -0.25 6.92 -51.93 -0.36 -0.61 16 30 H 0.09 -0.26 7.63 -51.93 -0.40 -0.66 16 31 H 0.06 -0.34 8.14 -51.93 -0.42 -0.77 16 32 H 0.08 -0.44 8.07 -51.93 -0.42 -0.86 16 33 H 0.07 -0.43 6.44 -51.93 -0.33 -0.77 16 34 H 0.08 -0.22 8.07 -51.93 -0.42 -0.64 16 35 H 0.09 0.14 7.15 -51.93 -0.37 -0.23 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 37 H 0.09 0.06 8.10 -51.93 -0.42 -0.36 16 38 H 0.38 -0.58 9.12 45.56 0.42 -0.17 16 39 H 0.10 0.40 7.64 -51.93 -0.40 0.00 16 40 H 0.06 0.13 8.14 -51.94 -0.42 -0.29 16 41 H 0.14 -0.47 6.30 -52.48 -0.33 -0.80 16 42 H 0.13 -0.38 4.87 -52.49 -0.26 -0.64 16 43 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 44 H 0.38 -0.65 8.70 45.56 0.40 -0.26 16 45 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 46 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 47 H 0.14 0.08 6.30 -52.49 -0.33 -0.25 16 LS Contribution 383.89 15.07 5.79 5.79 Total: 0.00 -11.38 383.89 -9.16 -20.54 By element: Atomic # 1 Polarization: -4.41 SS G_CDS: -6.17 Total: -10.57 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: -1.25 Total: -0.08 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: -0.52 Total: 0.01 kcal Atomic # 8 Polarization: -7.68 SS G_CDS: -1.95 Total: -9.63 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.06 Total: -6.05 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -11.38 -9.16 -20.54 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.359 kcal (2) G-P(sol) polarization free energy of solvation -11.377 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.165 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.542 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.901 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds