Wall clock time and date at job start Sat Mar 6 2021 17:16:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 C 1.46498 * 120.00407 * 2 1 4 4 C 1.52998 * 109.47212 * 269.99690 * 3 2 1 5 5 H 1.09001 * 112.84893 * 316.19868 * 4 3 2 6 6 C 1.53785 * 113.61425 * 87.49771 * 4 3 2 7 7 C 1.53784 * 87.07970 * 139.98480 * 6 4 3 8 8 H 1.09000 * 113.68652 * 89.13216 * 7 6 4 9 9 O 1.42903 * 113.61092 * 220.01717 * 7 6 4 10 10 C 1.53777 * 87.08050 * 334.56681 * 7 6 4 11 11 C 1.34782 * 120.00193 * 179.97438 * 2 1 3 12 12 O 1.21689 * 120.00233 * 180.91341 * 11 2 1 13 13 C 1.46679 * 119.99716 * 0.90968 * 11 2 1 14 14 C 1.37867 * 126.23359 * 168.72552 * 13 11 2 15 15 C 1.39834 * 107.08409 * 179.97438 * 14 13 11 16 16 C 1.35450 * 107.86695 * 0.02562 * 15 14 13 17 17 C 1.50703 * 125.56292 * 179.97438 * 16 15 14 18 18 O 1.42900 * 109.47320 * 245.02415 * 17 16 15 19 19 Si 1.86298 * 109.47364 * 5.02701 * 17 16 15 20 20 N 1.35530 * 108.87117 * 359.97438 * 16 15 14 21 21 H 1.09000 * 109.47623 * 263.45366 * 1 2 3 22 22 H 1.09003 * 109.46698 * 23.44955 * 1 2 3 23 23 H 1.08995 * 109.47265 * 143.44490 * 1 2 3 24 24 H 1.09001 * 109.47258 * 29.99684 * 3 2 1 25 25 H 1.09003 * 109.47847 * 149.99837 * 3 2 1 26 26 H 1.08998 * 113.61739 * 254.53290 * 6 4 3 27 27 H 1.09000 * 113.61546 * 25.43651 * 6 4 3 28 28 H 0.96697 * 114.00020 * 277.49376 * 9 7 6 29 29 H 1.08991 * 113.61711 * 270.88101 * 10 7 6 30 30 H 1.08997 * 113.68714 * 139.99030 * 10 7 6 31 31 H 1.08001 * 126.45746 * 0.24555 * 14 13 11 32 32 H 1.08000 * 126.06610 * 180.02562 * 15 14 13 33 33 H 1.09000 * 109.46801 * 125.03068 * 17 16 15 34 34 H 0.96707 * 113.99812 * 60.00033 * 18 17 16 35 35 H 1.48503 * 110.00064 * 58.67818 * 19 17 16 36 36 H 1.48495 * 109.99998 * 179.97438 * 19 17 16 37 37 H 0.96999 * 125.67632 * 180.02562 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4526 1.7103 -1.4425 5 1 2.7835 0.8929 -2.0832 6 6 1.3072 2.5418 -2.0439 7 6 2.3904 3.4190 -2.6936 8 1 2.7042 3.0705 -3.6775 9 8 2.0863 4.8151 -2.6704 10 6 3.3233 2.9728 -1.5554 11 6 2.1389 -1.1672 0.0005 12 8 3.3556 -1.1673 0.0173 13 6 1.4056 -2.4374 -0.0191 14 6 1.9456 -3.6868 -0.2385 15 6 0.8945 -4.6065 -0.1695 16 6 -0.2440 -3.9182 0.0845 17 6 -1.6168 -4.5207 0.2378 18 8 -2.4583 -4.0649 -0.8235 19 14 -1.4902 -6.3783 0.1759 20 7 0.0529 -2.5991 0.1784 21 1 -0.3634 -0.1172 1.0209 22 1 -0.3633 0.9428 -0.4090 23 1 -0.3633 -0.8255 -0.6120 24 1 1.6085 2.0284 0.5138 25 1 3.1499 1.1384 0.5138 26 1 0.7002 1.9928 -2.7637 27 1 0.7100 3.0663 -1.2979 28 1 1.4999 5.1018 -3.3839 29 1 3.2773 3.6150 -0.6760 30 1 4.3443 2.7714 -1.8796 31 1 2.9852 -3.9131 -0.4238 32 1 0.9761 -5.6759 -0.2964 33 1 -2.0421 -4.2171 1.1944 34 1 -2.1404 -4.3000 -1.7061 35 1 -0.5924 -6.8625 1.2551 36 1 -2.8374 -6.9845 0.3265 37 1 -0.5820 -1.8875 0.3555 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:16:23 Heat of formation + Delta-G solvation = -19.183296 kcal Electronic energy + Delta-G solvation = -20610.139017 eV Core-core repulsion = 17356.770392 eV Total energy + Delta-G solvation = -3253.368624 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.70597 -40.90320 -39.77052 -37.80325 -36.99326 -35.77776 -32.47262 -31.50999 -29.71211 -28.09726 -26.77020 -26.40581 -24.04903 -22.25638 -21.81732 -20.83514 -20.60007 -18.99235 -18.55678 -18.07304 -17.34926 -17.05100 -16.52519 -16.41674 -16.01942 -15.43036 -15.29076 -15.00460 -14.77781 -14.54500 -14.33191 -14.18961 -13.97024 -13.70998 -13.55342 -13.42580 -13.15080 -12.80391 -12.42350 -12.25474 -12.07855 -11.85329 -11.35632 -11.15970 -10.85437 -10.73230 -10.08499 -9.83896 -9.24519 -5.07618 0.37708 1.10615 1.52170 1.62796 1.73917 1.86338 2.17714 2.37174 3.17284 3.26292 3.36438 3.47863 3.53312 3.55022 3.68053 3.76064 3.85930 3.97406 4.16090 4.20504 4.24027 4.29048 4.34374 4.41585 4.60337 4.65663 4.68803 4.77107 4.91151 5.00742 5.01314 5.10091 5.23922 5.41730 5.62214 5.84431 6.15850 6.26953 6.34462 6.65035 7.06690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.615 5.615 3 C 0.128 3.872 4 C -0.124 4.124 5 H 0.097 0.903 6 C -0.166 4.166 7 C 0.076 3.924 8 H 0.082 0.918 9 O -0.560 6.560 10 C -0.121 4.121 11 C 0.589 3.411 12 O -0.521 6.521 13 C -0.049 4.049 14 C -0.099 4.099 15 C -0.198 4.198 16 C 0.014 3.986 17 C -0.055 4.055 18 O -0.544 6.544 19 Si 0.721 3.279 20 N -0.530 5.530 21 H 0.061 0.939 22 H 0.088 0.912 23 H 0.076 0.924 24 H 0.082 0.918 25 H 0.092 0.908 26 H 0.068 0.932 27 H 0.089 0.911 28 H 0.379 0.621 29 H 0.093 0.907 30 H 0.077 0.923 31 H 0.152 0.848 32 H 0.151 0.849 33 H 0.114 0.886 34 H 0.383 0.617 35 H -0.253 1.253 36 H -0.254 1.254 37 H 0.421 0.579 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.917 -0.579 -2.835 4.869 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.348 5.348 3 C 0.006 3.994 4 C -0.143 4.143 5 H 0.115 0.885 6 C -0.203 4.203 7 C 0.017 3.983 8 H 0.100 0.900 9 O -0.366 6.366 10 C -0.159 4.159 11 C 0.378 3.622 12 O -0.396 6.396 13 C -0.162 4.162 14 C -0.126 4.126 15 C -0.223 4.223 16 C -0.104 4.104 17 C -0.166 4.166 18 O -0.349 6.349 19 Si 0.621 3.379 20 N -0.135 5.135 21 H 0.079 0.921 22 H 0.107 0.893 23 H 0.094 0.906 24 H 0.100 0.900 25 H 0.110 0.890 26 H 0.086 0.914 27 H 0.108 0.892 28 H 0.226 0.774 29 H 0.111 0.889 30 H 0.096 0.904 31 H 0.170 0.830 32 H 0.168 0.832 33 H 0.131 0.869 34 H 0.231 0.769 35 H -0.177 1.177 36 H -0.178 1.178 37 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges -3.461 -0.927 -1.319 3.818 hybrid contribution -0.798 0.969 -0.106 1.260 sum -4.258 0.042 -1.424 4.491 Atomic orbital electron populations 1.22230 0.80380 1.04467 1.01665 1.47720 1.06505 1.06242 1.74331 1.21523 0.98070 0.83710 0.96069 1.22730 0.97417 0.96929 0.97266 0.88520 1.23794 0.97243 0.98341 1.00968 1.23315 0.96074 0.80790 0.98111 0.90007 1.86537 1.70861 1.23882 1.55301 1.23053 0.98410 0.95558 0.98871 1.17151 0.86767 0.81888 0.76397 1.90868 1.12409 1.86498 1.49870 1.20415 0.83021 0.95497 1.17311 1.21322 0.99771 0.89619 1.01866 1.20714 0.91424 0.99635 1.10482 1.21218 0.97129 0.84161 1.07916 1.24953 0.86265 1.11922 0.93416 1.86496 1.49578 1.81452 1.17408 0.94019 0.81388 0.72641 0.89863 1.43135 1.07840 1.08265 1.54219 0.92085 0.89319 0.90554 0.89961 0.89002 0.91360 0.89223 0.77390 0.88893 0.90380 0.83000 0.83177 0.86890 0.76872 1.17698 1.17832 0.73268 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.17 8.88 59.84 0.53 0.37 16 2 N -0.61 -0.09 2.87 -183.13 -0.53 -0.62 16 3 C 0.13 -0.03 5.22 -4.04 -0.02 -0.05 16 4 C -0.12 0.05 3.96 -89.81 -0.36 -0.30 16 5 H 0.10 0.10 8.14 -51.93 -0.42 -0.33 16 6 C -0.17 0.24 7.16 -25.91 -0.19 0.05 16 7 C 0.08 -0.03 5.21 -25.92 -0.14 -0.17 16 8 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 9 O -0.56 -0.38 13.67 -35.23 -0.48 -0.86 16 10 C -0.12 0.00 7.47 -25.92 -0.19 -0.19 16 11 C 0.59 1.82 7.64 -12.85 -0.10 1.73 16 12 O -0.52 -3.41 16.48 5.20 0.09 -3.33 16 13 C -0.05 -0.09 6.64 -81.98 -0.54 -0.64 16 14 C -0.10 -0.18 10.67 -39.12 -0.42 -0.60 16 15 C -0.20 0.01 9.32 -39.98 -0.37 -0.36 16 16 C 0.01 -0.01 6.47 -81.95 -0.53 -0.54 16 17 C -0.06 0.09 3.08 36.01 0.11 0.20 16 18 O -0.54 0.89 12.88 -35.23 -0.45 0.43 16 19 Si 0.72 -1.67 30.56 -169.99 -5.19 -6.86 16 20 N -0.53 0.18 5.04 -5.70 -0.03 0.16 16 21 H 0.06 -0.24 7.71 -51.93 -0.40 -0.64 16 22 H 0.09 -0.37 7.72 -51.93 -0.40 -0.77 16 23 H 0.08 -0.24 5.21 -51.93 -0.27 -0.51 16 24 H 0.08 -0.15 7.77 -51.93 -0.40 -0.55 16 25 H 0.09 0.13 7.41 -51.93 -0.38 -0.25 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.09 -0.13 7.90 -51.93 -0.41 -0.54 16 28 H 0.38 -1.26 9.12 45.56 0.42 -0.85 16 29 H 0.09 0.02 8.10 -51.93 -0.42 -0.40 16 30 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 31 H 0.15 0.23 8.06 -52.49 -0.42 -0.19 16 32 H 0.15 -0.34 6.19 -52.49 -0.32 -0.66 16 33 H 0.11 -0.18 7.96 -51.93 -0.41 -0.59 16 34 H 0.38 -1.97 8.70 45.56 0.40 -1.57 16 35 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 36 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 37 H 0.42 -0.94 4.97 -40.82 -0.20 -1.14 16 LS Contribution 306.82 15.07 4.62 4.62 Total: 0.00 -8.61 306.82 -8.32 -16.93 By element: Atomic # 1 Polarization: -5.85 SS G_CDS: -4.13 Total: -9.98 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -2.21 Total: -0.50 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.55 Total: -0.47 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.85 Total: -3.76 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.19 Total: -6.86 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -8.61 -8.32 -16.93 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.250 kcal (2) G-P(sol) polarization free energy of solvation -8.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.865 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.318 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.933 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.183 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds