Wall clock time and date at job start Sat Mar 6 2021 17:16:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 C 1.46498 * 120.00407 * 2 1 4 4 C 1.52998 * 109.47212 * 269.99690 * 3 2 1 5 5 H 1.09001 * 112.84893 * 316.19868 * 4 3 2 6 6 C 1.53785 * 113.61425 * 87.49771 * 4 3 2 7 7 C 1.53784 * 87.07970 * 139.98480 * 6 4 3 8 8 H 1.09000 * 113.68652 * 89.13216 * 7 6 4 9 9 O 1.42903 * 113.61092 * 220.01717 * 7 6 4 10 10 C 1.53777 * 87.08050 * 334.56681 * 7 6 4 11 11 C 1.34782 * 120.00193 * 179.97438 * 2 1 3 12 12 O 1.21689 * 120.00233 * 180.91341 * 11 2 1 13 13 C 1.46679 * 119.99716 * 0.90968 * 11 2 1 14 14 C 1.37867 * 126.23359 * 168.72552 * 13 11 2 15 15 C 1.39834 * 107.08409 * 179.97438 * 14 13 11 16 16 C 1.35450 * 107.86695 * 0.02562 * 15 14 13 17 17 C 1.50703 * 125.56292 * 179.97438 * 16 15 14 18 18 O 1.42900 * 109.47320 * 245.02415 * 17 16 15 19 19 Si 1.86298 * 109.47364 * 5.02701 * 17 16 15 20 20 N 1.35530 * 108.87117 * 359.97438 * 16 15 14 21 21 H 1.09000 * 109.47623 * 263.45366 * 1 2 3 22 22 H 1.09003 * 109.46698 * 23.44955 * 1 2 3 23 23 H 1.08995 * 109.47265 * 143.44490 * 1 2 3 24 24 H 1.09001 * 109.47258 * 29.99684 * 3 2 1 25 25 H 1.09003 * 109.47847 * 149.99837 * 3 2 1 26 26 H 1.08998 * 113.61739 * 254.53290 * 6 4 3 27 27 H 1.09000 * 113.61546 * 25.43651 * 6 4 3 28 28 H 0.96697 * 114.00020 * 277.49376 * 9 7 6 29 29 H 1.08991 * 113.61711 * 270.88101 * 10 7 6 30 30 H 1.08997 * 113.68714 * 139.99030 * 10 7 6 31 31 H 1.08001 * 126.45746 * 0.24555 * 14 13 11 32 32 H 1.08000 * 126.06610 * 180.02562 * 15 14 13 33 33 H 1.09000 * 109.46801 * 125.03068 * 17 16 15 34 34 H 0.96707 * 113.99812 * 60.00033 * 18 17 16 35 35 H 1.48503 * 110.00064 * 58.67818 * 19 17 16 36 36 H 1.48495 * 109.99998 * 179.97438 * 19 17 16 37 37 H 0.96999 * 125.67632 * 180.02562 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4526 1.7103 -1.4425 5 1 2.7835 0.8929 -2.0832 6 6 1.3072 2.5418 -2.0439 7 6 2.3904 3.4190 -2.6936 8 1 2.7042 3.0705 -3.6775 9 8 2.0863 4.8151 -2.6704 10 6 3.3233 2.9728 -1.5554 11 6 2.1389 -1.1672 0.0005 12 8 3.3556 -1.1673 0.0173 13 6 1.4056 -2.4374 -0.0191 14 6 1.9456 -3.6868 -0.2385 15 6 0.8945 -4.6065 -0.1695 16 6 -0.2440 -3.9182 0.0845 17 6 -1.6168 -4.5207 0.2378 18 8 -2.4583 -4.0649 -0.8235 19 14 -1.4902 -6.3783 0.1759 20 7 0.0529 -2.5991 0.1784 21 1 -0.3634 -0.1172 1.0209 22 1 -0.3633 0.9428 -0.4090 23 1 -0.3633 -0.8255 -0.6120 24 1 1.6085 2.0284 0.5138 25 1 3.1499 1.1384 0.5138 26 1 0.7002 1.9928 -2.7637 27 1 0.7100 3.0663 -1.2979 28 1 1.4999 5.1018 -3.3839 29 1 3.2773 3.6150 -0.6760 30 1 4.3443 2.7714 -1.8796 31 1 2.9852 -3.9131 -0.4238 32 1 0.9761 -5.6759 -0.2964 33 1 -2.0421 -4.2171 1.1944 34 1 -2.1404 -4.3000 -1.7061 35 1 -0.5924 -6.8625 1.2551 36 1 -2.8374 -6.9845 0.3265 37 1 -0.5820 -1.8875 0.3555 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12312124_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:16:22 Heat of formation + Delta-G solvation = -21.869870 kcal Electronic energy + Delta-G solvation = -20610.255515 eV Core-core repulsion = 17356.770392 eV Total energy + Delta-G solvation = -3253.485123 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.73296 -40.92840 -39.84328 -37.67191 -37.07638 -35.77745 -32.47874 -31.52844 -29.65016 -28.06890 -26.71912 -26.35183 -24.04902 -22.28059 -21.81219 -20.86254 -20.57401 -18.97336 -18.53311 -18.04185 -17.41266 -17.04830 -16.46555 -16.40978 -15.95360 -15.38932 -15.28278 -14.98703 -14.76778 -14.49702 -14.33273 -14.24184 -13.97152 -13.70711 -13.48614 -13.33135 -13.06143 -12.80629 -12.42696 -12.20867 -12.05741 -11.82695 -11.34845 -11.30575 -10.80608 -10.64496 -10.11801 -9.88459 -9.27397 -4.90887 0.28436 1.23721 1.51256 1.69343 1.77141 1.95797 2.16887 2.29777 3.26725 3.38354 3.47848 3.51915 3.58094 3.60712 3.77193 3.89984 3.92561 4.17598 4.19812 4.25638 4.30623 4.38970 4.44682 4.56617 4.59271 4.71971 4.75475 4.78415 4.94070 4.96141 5.03965 5.12150 5.26838 5.42915 5.59911 5.79758 6.12689 6.31537 6.68403 6.86127 6.92068 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.608 5.608 3 C 0.127 3.873 4 C -0.118 4.118 5 H 0.079 0.921 6 C -0.151 4.151 7 C 0.073 3.927 8 H 0.089 0.911 9 O -0.580 6.580 10 C -0.128 4.128 11 C 0.582 3.418 12 O -0.570 6.570 13 C -0.065 4.065 14 C -0.118 4.118 15 C -0.202 4.202 16 C 0.021 3.979 17 C -0.055 4.055 18 O -0.553 6.553 19 Si 0.805 3.195 20 N -0.520 5.520 21 H 0.076 0.924 22 H 0.107 0.893 23 H 0.080 0.920 24 H 0.104 0.896 25 H 0.069 0.931 26 H 0.077 0.923 27 H 0.096 0.904 28 H 0.395 0.605 29 H 0.090 0.910 30 H 0.071 0.929 31 H 0.145 0.855 32 H 0.171 0.829 33 H 0.115 0.885 34 H 0.399 0.601 35 H -0.288 1.288 36 H -0.294 1.294 37 H 0.430 0.570 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.673 -0.383 -3.215 6.532 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 N -0.339 5.339 3 C 0.005 3.995 4 C -0.138 4.138 5 H 0.098 0.902 6 C -0.188 4.188 7 C 0.015 3.985 8 H 0.107 0.893 9 O -0.388 6.388 10 C -0.166 4.166 11 C 0.372 3.628 12 O -0.449 6.449 13 C -0.178 4.178 14 C -0.145 4.145 15 C -0.226 4.226 16 C -0.098 4.098 17 C -0.164 4.164 18 O -0.361 6.361 19 Si 0.709 3.291 20 N -0.126 5.126 21 H 0.094 0.906 22 H 0.126 0.874 23 H 0.098 0.902 24 H 0.122 0.878 25 H 0.088 0.912 26 H 0.096 0.904 27 H 0.114 0.886 28 H 0.245 0.755 29 H 0.108 0.892 30 H 0.089 0.911 31 H 0.163 0.837 32 H 0.188 0.812 33 H 0.133 0.867 34 H 0.250 0.750 35 H -0.215 1.215 36 H -0.222 1.222 37 H 0.278 0.722 Dipole moment (debyes) X Y Z Total from point charges -5.261 -0.684 -1.733 5.581 hybrid contribution -0.301 0.908 0.022 0.956 sum -5.562 0.224 -1.711 5.823 Atomic orbital electron populations 1.22465 0.78194 1.05726 1.02898 1.47782 1.07867 1.05472 1.72823 1.21563 0.97614 0.84041 0.96253 1.22583 0.98106 0.96275 0.96822 0.90225 1.23695 0.96664 0.97531 1.00922 1.23367 0.96291 0.80677 0.98206 0.89346 1.86490 1.71546 1.24340 1.56451 1.23091 0.98413 0.95865 0.99224 1.17412 0.86381 0.82980 0.76021 1.90831 1.14374 1.87245 1.52459 1.20286 0.83961 0.95040 1.18554 1.21486 1.00141 0.90397 1.02497 1.20962 0.90908 1.00509 1.10245 1.21466 0.97575 0.84000 1.06746 1.25039 0.85473 1.12158 0.93756 1.86472 1.49661 1.81574 1.18412 0.92979 0.77553 0.70497 0.88050 1.43121 1.07106 1.08730 1.53622 0.90600 0.87400 0.90159 0.87807 0.91212 0.90435 0.88551 0.75538 0.89174 0.91072 0.83702 0.81221 0.86745 0.75021 1.21496 1.22154 0.72205 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.35 8.88 127.77 1.13 0.79 16 2 N -0.61 -0.42 2.87 -851.53 -2.45 -2.87 16 3 C 0.13 0.04 5.22 86.38 0.45 0.49 16 4 C -0.12 0.02 3.96 -10.27 -0.04 -0.02 16 5 H 0.08 0.28 8.14 -2.39 -0.02 0.26 16 6 C -0.15 0.56 7.16 31.12 0.22 0.78 16 7 C 0.07 -0.07 5.21 31.12 0.16 0.09 16 8 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 9 O -0.58 -0.55 13.67 -148.98 -2.04 -2.58 16 10 C -0.13 -0.12 7.47 31.12 0.23 0.12 16 11 C 0.58 4.51 7.64 86.45 0.66 5.17 16 12 O -0.57 -9.07 16.48 -4.31 -0.07 -9.15 16 13 C -0.06 -0.30 6.64 40.35 0.27 -0.03 16 14 C -0.12 -0.56 10.67 22.57 0.24 -0.32 16 15 C -0.20 0.07 9.32 22.01 0.21 0.27 16 16 C 0.02 -0.04 6.47 41.34 0.27 0.23 16 17 C -0.05 0.25 3.08 71.24 0.22 0.47 16 18 O -0.55 2.75 12.88 -148.98 -1.92 0.83 16 19 Si 0.81 -4.24 30.56 68.60 2.10 -2.14 16 20 N -0.52 0.63 5.04 -171.93 -0.87 -0.24 16 21 H 0.08 -0.72 7.71 -2.39 -0.02 -0.73 16 22 H 0.11 -1.13 7.72 -2.39 -0.02 -1.15 16 23 H 0.08 -0.61 5.21 -2.39 -0.01 -0.62 16 24 H 0.10 -0.44 7.77 -2.39 -0.02 -0.46 16 25 H 0.07 0.35 7.41 -2.39 -0.02 0.33 16 26 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 27 H 0.10 -0.45 7.90 -2.39 -0.02 -0.47 16 28 H 0.39 -2.89 9.12 -74.06 -0.68 -3.57 16 29 H 0.09 0.12 8.10 -2.39 -0.02 0.11 16 30 H 0.07 0.14 8.14 -2.39 -0.02 0.12 16 31 H 0.15 0.77 8.06 -2.91 -0.02 0.74 16 32 H 0.17 -0.90 6.19 -2.91 -0.02 -0.92 16 33 H 0.12 -0.52 7.96 -2.39 -0.02 -0.54 16 34 H 0.40 -4.87 8.70 -74.05 -0.64 -5.51 16 35 H -0.29 -0.23 7.11 99.48 0.71 0.48 16 36 H -0.29 -0.49 7.11 99.48 0.71 0.22 16 37 H 0.43 -2.41 4.97 -92.71 -0.46 -2.87 16 Total: 0.00 -21.51 306.82 -1.85 -23.35 By element: Atomic # 1 Polarization: -14.61 SS G_CDS: -0.63 Total: -15.24 kcal Atomic # 6 Polarization: 4.01 SS G_CDS: 4.02 Total: 8.03 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -3.31 Total: -3.11 kcal Atomic # 8 Polarization: -6.87 SS G_CDS: -4.03 Total: -10.90 kcal Atomic # 14 Polarization: -4.24 SS G_CDS: 2.10 Total: -2.14 kcal Total: -21.51 -1.85 -23.35 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.482 kcal (2) G-P(sol) polarization free energy of solvation -21.505 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.847 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.352 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds