Wall clock time and date at job start Sat Mar 6 2021 17:16:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.46503 * 119.99509 * 2 1 4 4 C 1.53003 * 109.47090 * 270.00040 * 3 2 1 5 5 H 1.09005 * 112.84737 * 45.34149 * 4 3 2 6 6 C 1.53783 * 113.61301 * 176.53150 * 4 3 2 7 7 C 1.53781 * 87.08013 * 139.98584 * 6 4 3 8 8 H 1.08998 * 113.61176 * 89.20048 * 7 6 4 9 9 O 1.42900 * 113.61294 * 220.02154 * 7 6 4 10 10 C 1.53773 * 113.61881 * 274.13908 * 4 3 2 11 11 C 1.34769 * 120.00179 * 180.02562 * 2 1 3 12 12 O 1.21280 * 120.00097 * 179.97438 * 11 2 1 13 13 C 1.50701 * 120.00219 * 359.97438 * 11 2 1 14 14 N 1.46498 * 109.47268 * 180.02562 * 13 11 2 15 15 C 1.36835 * 125.06518 * 265.22977 * 14 13 11 16 16 C 1.34229 * 109.93982 * 180.20547 * 15 14 13 17 17 C 1.50705 * 126.50090 * 179.87484 * 16 15 14 18 18 O 1.42894 * 109.47171 * 104.68600 * 17 16 15 19 19 Si 1.86298 * 109.46780 * 344.68041 * 17 16 15 20 20 C 1.46488 * 107.00074 * 359.60828 * 16 15 14 21 21 C 1.39593 * 134.03387 * 180.24364 * 20 16 15 22 22 C 1.36665 * 119.76247 * 179.97438 * 21 20 16 23 23 C 1.38786 * 120.52659 * 0.03947 * 22 21 20 24 24 C 1.37783 * 120.67017 * 359.97438 * 23 22 21 25 25 C 1.37688 * 125.06289 * 84.99901 * 14 13 11 26 26 H 1.09003 * 109.46192 * 269.99280 * 1 2 3 27 27 H 1.08998 * 109.47536 * 29.99204 * 1 2 3 28 28 H 1.08998 * 109.46998 * 149.99947 * 1 2 3 29 29 H 1.08996 * 109.47601 * 30.00690 * 3 2 1 30 30 H 1.09006 * 109.46832 * 150.00565 * 3 2 1 31 31 H 1.08997 * 113.61183 * 254.53515 * 6 4 3 32 32 H 1.08998 * 113.61052 * 25.43407 * 6 4 3 33 33 H 0.96701 * 114.00048 * 180.02562 * 9 7 6 34 34 H 1.09001 * 113.61713 * 334.56995 * 10 4 3 35 35 H 1.09007 * 113.61427 * 105.47327 * 10 4 3 36 36 H 1.08995 * 109.47510 * 59.99796 * 13 11 2 37 37 H 1.09001 * 109.46805 * 299.99854 * 13 11 2 38 38 H 1.08005 * 125.02557 * 0.05412 * 15 14 13 39 39 H 1.09004 * 109.46779 * 224.68923 * 17 16 15 40 40 H 0.96709 * 113.99337 * 180.02562 * 18 17 16 41 41 H 1.48506 * 109.99834 * 60.00830 * 19 17 16 42 42 H 1.48502 * 110.00011 * 181.32094 * 19 17 16 43 43 H 1.07996 * 120.11969 * 359.97352 * 21 20 16 44 44 H 1.08000 * 119.73165 * 180.02562 * 22 21 20 45 45 H 1.08002 * 119.66374 * 180.02562 * 23 22 21 46 46 H 1.08007 * 120.11332 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4524 1.7105 -1.4425 5 1 1.5713 1.6134 -2.0769 6 6 3.1442 3.0794 -1.5545 7 6 3.9734 2.4786 -2.7018 8 1 3.5096 2.5922 -3.6816 9 8 5.3451 2.8788 -2.6872 10 6 3.7242 1.1028 -2.0573 11 6 2.1389 -1.1671 -0.0005 12 8 3.3517 -1.1671 -0.0010 13 6 1.3855 -2.4723 -0.0005 14 7 2.3375 -3.5857 -0.0005 15 6 2.7776 -4.2438 -1.1166 16 6 3.6384 -5.2126 -0.7672 17 6 4.3439 -6.1639 -1.6992 18 8 5.7111 -5.7712 -1.8353 19 14 3.5174 -6.1252 -3.3684 20 6 3.7670 -5.1658 0.6912 21 6 4.5015 -5.8993 1.6246 22 6 4.4001 -5.6000 2.9542 23 6 3.5720 -4.5727 3.3844 24 6 2.8380 -3.8363 2.4804 25 6 2.9262 -4.1231 1.1222 26 1 -0.3632 -0.0001 1.0278 27 1 -0.3634 0.8900 -0.5137 28 1 -0.3633 -0.8900 -0.5138 29 1 1.6084 2.0284 0.5139 30 1 3.1500 1.1385 0.5138 31 1 2.4770 3.8811 -1.8712 32 1 3.7369 3.3420 -0.6782 33 1 5.8717 2.5044 -3.4066 34 1 4.4759 0.8240 -1.3189 35 1 3.5247 0.3111 -2.7795 36 1 0.7585 -2.5299 -0.8902 37 1 0.7592 -2.5302 0.8897 38 1 2.4751 -4.0186 -2.1287 39 1 4.2947 -7.1741 -1.2928 40 1 6.2271 -6.3403 -2.4228 41 1 3.5778 -4.7531 -3.9333 42 1 4.1838 -7.0826 -4.2874 43 1 5.1474 -6.7005 1.2972 44 1 4.9689 -6.1675 3.6759 45 1 3.5028 -4.3478 4.4385 46 1 2.1967 -3.0385 2.8251 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:16:42 Heat of formation + Delta-G solvation = -6.703657 kcal Electronic energy + Delta-G solvation = -28983.983428 eV Core-core repulsion = 25035.402302 eV Total energy + Delta-G solvation = -3948.581126 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.44920 -41.13808 -39.87868 -37.95566 -37.62535 -36.84770 -35.71463 -34.10470 -31.51851 -30.19605 -30.01642 -28.67620 -27.43742 -26.64717 -25.56367 -23.83634 -23.37047 -22.35042 -20.64099 -20.54489 -20.28766 -18.62911 -18.37917 -18.25992 -18.05673 -17.65362 -16.97729 -16.77050 -16.28823 -16.22026 -15.70929 -15.52011 -15.23110 -14.84755 -14.74393 -14.67883 -14.57534 -14.26369 -14.21831 -13.99171 -13.74067 -13.43277 -13.39224 -13.37900 -13.06219 -12.71344 -12.62365 -12.45125 -12.39161 -12.36525 -11.97360 -11.82132 -11.56507 -11.29733 -10.97072 -10.75651 -10.36207 -10.25149 -9.79405 -8.97193 -8.48052 -4.93183 0.32107 0.83718 1.35068 1.42072 1.44240 1.61891 1.77746 1.97748 2.02397 3.09351 3.22806 3.27269 3.47871 3.52797 3.61464 3.68433 3.74535 3.77968 3.81686 3.90184 3.91399 3.93846 4.10330 4.14251 4.24181 4.34586 4.35395 4.38750 4.43721 4.46644 4.48202 4.73872 4.75141 4.79178 4.83554 4.83894 4.94719 5.01340 5.03391 5.14434 5.28990 5.30507 5.45581 5.68971 5.84888 5.90171 5.94034 6.09801 6.31783 6.40676 6.64333 6.73270 7.01560 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.071 3.929 2 N -0.615 5.615 3 C 0.128 3.872 4 C -0.127 4.127 5 H 0.092 0.908 6 C -0.120 4.120 7 C 0.073 3.927 8 H 0.079 0.921 9 O -0.560 6.560 10 C -0.154 4.154 11 C 0.490 3.510 12 O -0.506 6.506 13 C 0.094 3.906 14 N -0.466 5.466 15 C 0.072 3.928 16 C -0.151 4.151 17 C -0.037 4.037 18 O -0.534 6.534 19 Si 0.678 3.322 20 C -0.085 4.085 21 C -0.065 4.065 22 C -0.146 4.146 23 C -0.097 4.097 24 C -0.127 4.127 25 C 0.110 3.890 26 H 0.062 0.938 27 H 0.078 0.922 28 H 0.072 0.928 29 H 0.082 0.918 30 H 0.087 0.913 31 H 0.075 0.925 32 H 0.093 0.907 33 H 0.379 0.621 34 H 0.096 0.904 35 H 0.061 0.939 36 H 0.121 0.879 37 H 0.117 0.883 38 H 0.168 0.832 39 H 0.072 0.928 40 H 0.375 0.625 41 H -0.256 1.256 42 H -0.260 1.260 43 H 0.121 0.879 44 H 0.122 0.878 45 H 0.125 0.875 46 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.198 -0.438 -1.358 8.321 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 N -0.351 5.351 3 C 0.005 3.995 4 C -0.146 4.146 5 H 0.111 0.889 6 C -0.158 4.158 7 C 0.014 3.986 8 H 0.097 0.903 9 O -0.365 6.365 10 C -0.192 4.192 11 C 0.275 3.725 12 O -0.379 6.379 13 C -0.032 4.032 14 N -0.149 5.149 15 C -0.053 4.053 16 C -0.159 4.159 17 C -0.147 4.147 18 O -0.341 6.341 19 Si 0.579 3.421 20 C -0.090 4.090 21 C -0.084 4.084 22 C -0.165 4.165 23 C -0.116 4.116 24 C -0.147 4.147 25 C 0.006 3.994 26 H 0.081 0.919 27 H 0.097 0.903 28 H 0.091 0.909 29 H 0.100 0.900 30 H 0.106 0.894 31 H 0.094 0.906 32 H 0.111 0.889 33 H 0.226 0.774 34 H 0.115 0.885 35 H 0.080 0.920 36 H 0.139 0.861 37 H 0.135 0.865 38 H 0.185 0.815 39 H 0.090 0.910 40 H 0.222 0.778 41 H -0.181 1.181 42 H -0.185 1.185 43 H 0.139 0.861 44 H 0.140 0.860 45 H 0.143 0.857 46 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -8.066 0.760 -1.296 8.205 hybrid contribution 1.191 -0.310 -0.643 1.388 sum -6.875 0.450 -1.938 7.157 Atomic orbital electron populations 1.21917 0.79059 1.03717 1.02463 1.47862 1.07089 1.05897 1.74205 1.21503 0.98084 0.83927 0.95947 1.22725 0.97904 0.96867 0.97149 0.88942 1.23036 0.97585 0.96130 0.99027 1.23386 0.82598 0.94865 0.97756 0.90313 1.86523 1.20754 1.74339 1.54931 1.23712 0.97825 0.96841 1.00795 1.20992 0.88713 0.85489 0.77298 1.90816 1.13303 1.86664 1.47121 1.21643 0.91078 0.83965 1.06552 1.43208 1.38765 1.27922 1.05012 1.21473 0.99039 0.93876 0.90862 1.19399 1.02986 1.01675 0.91809 1.24016 0.85613 0.97949 1.07130 1.86682 1.20514 1.57469 1.69439 0.95413 0.90393 0.81020 0.75245 1.18935 0.99698 0.97844 0.92486 1.20265 0.97501 0.98601 0.92017 1.20654 1.00970 0.99305 0.95551 1.20809 0.96327 0.95552 0.98952 1.19948 1.03428 1.02025 0.89309 1.18146 0.97236 0.95890 0.88174 0.91905 0.90338 0.90942 0.89972 0.89424 0.90586 0.88890 0.77364 0.88538 0.92007 0.86107 0.86497 0.81538 0.91044 0.77819 1.18088 1.18489 0.86124 0.85961 0.85747 0.86779 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.36 10.24 59.85 0.61 0.25 16 2 N -0.62 0.83 2.87 -181.56 -0.52 0.31 16 3 C 0.13 -0.08 5.23 -4.04 -0.02 -0.10 16 4 C -0.13 0.07 3.96 -89.81 -0.36 -0.28 16 5 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 6 C -0.12 0.00 7.48 -25.92 -0.19 -0.20 16 7 C 0.07 0.07 5.21 -25.83 -0.13 -0.06 16 8 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 9 O -0.56 -1.47 13.67 -35.23 -0.48 -1.96 16 10 C -0.15 -0.27 6.85 -25.83 -0.18 -0.45 16 11 C 0.49 0.60 7.74 -10.99 -0.09 0.52 16 12 O -0.51 -3.09 15.09 5.56 0.08 -3.01 16 13 C 0.09 -0.13 5.03 -5.19 -0.03 -0.16 16 14 N -0.47 -1.05 2.27 -115.71 -0.26 -1.31 16 15 C 0.07 0.17 9.89 -16.73 -0.17 0.00 16 16 C -0.15 -0.56 5.61 -102.71 -0.58 -1.14 16 17 C -0.04 -0.07 3.05 36.01 0.11 0.04 16 18 O -0.53 -1.88 12.86 -35.23 -0.45 -2.33 16 19 Si 0.68 -0.13 30.80 -169.99 -5.24 -5.36 16 20 C -0.09 -0.43 6.35 -105.14 -0.67 -1.10 16 21 C -0.07 -0.27 10.05 -39.64 -0.40 -0.67 16 22 C -0.15 -0.44 9.97 -39.95 -0.40 -0.84 16 23 C -0.10 -0.26 10.01 -39.55 -0.40 -0.66 16 24 C -0.13 -0.40 10.00 -39.43 -0.39 -0.79 16 25 C 0.11 0.46 6.80 -83.99 -0.57 -0.11 16 26 H 0.06 -0.36 8.14 -51.93 -0.42 -0.78 16 27 H 0.08 -0.45 8.07 -51.93 -0.42 -0.87 16 28 H 0.07 -0.49 6.44 -51.93 -0.33 -0.82 16 29 H 0.08 -0.20 8.07 -51.93 -0.42 -0.62 16 30 H 0.09 0.17 7.16 -51.93 -0.37 -0.20 16 31 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 32 H 0.09 0.09 8.10 -51.93 -0.42 -0.33 16 33 H 0.38 -0.43 9.12 45.56 0.42 -0.01 16 34 H 0.10 0.44 7.64 -51.93 -0.40 0.05 16 35 H 0.06 0.14 8.14 -51.92 -0.42 -0.29 16 36 H 0.12 -0.57 7.38 -51.93 -0.38 -0.95 16 37 H 0.12 -0.42 8.11 -51.93 -0.42 -0.84 16 38 H 0.17 -0.04 6.31 -52.48 -0.33 -0.37 16 39 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 40 H 0.37 -0.33 8.74 45.56 0.40 0.07 16 41 H -0.26 -0.65 7.04 56.52 0.40 -0.26 16 42 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 43 H 0.12 0.34 8.06 -52.49 -0.42 -0.08 16 44 H 0.12 0.12 8.06 -52.49 -0.42 -0.31 16 45 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 46 H 0.11 0.14 8.06 -52.48 -0.42 -0.28 16 LS Contribution 381.22 15.07 5.74 5.74 Total: 0.00 -11.82 381.22 -11.07 -22.89 By element: Atomic # 1 Polarization: -3.14 SS G_CDS: -6.10 Total: -9.24 kcal Atomic # 6 Polarization: -1.89 SS G_CDS: -3.84 Total: -5.73 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -0.78 Total: -1.00 kcal Atomic # 8 Polarization: -6.44 SS G_CDS: -0.85 Total: -7.29 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: -5.24 Total: -5.36 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -11.82 -11.07 -22.89 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.185 kcal (2) G-P(sol) polarization free energy of solvation -11.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.363 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.889 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds