Wall clock time and date at job start Sat Mar 6 2021 21:10:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42909 * 1 3 3 C 1.42892 * 113.99928 * 2 1 4 4 H 1.08993 * 112.85214 * 341.19319 * 3 2 1 5 5 C 1.53787 * 113.61437 * 112.50624 * 3 2 1 6 6 C 1.53776 * 87.08353 * 139.97763 * 5 3 2 7 7 H 1.08996 * 113.69384 * 220.00488 * 6 5 3 8 8 N 1.46509 * 113.61734 * 89.11198 * 6 5 3 9 9 C 1.34773 * 119.99664 * 107.49974 * 8 6 5 10 10 O 1.21696 * 120.00059 * 0.02562 * 9 8 6 11 11 C 1.46681 * 119.99674 * 180.02562 * 9 8 6 12 12 C 1.37875 * 126.23236 * 180.02562 * 11 9 8 13 13 C 1.39833 * 107.08615 * 179.74025 * 12 11 9 14 14 C 1.50697 * 126.06706 * 180.02562 * 13 12 11 15 15 O 1.42900 * 109.47123 * 65.00292 * 14 13 12 16 16 Si 1.86306 * 109.46977 * 184.99872 * 14 13 12 17 17 C 1.35454 * 107.86387 * 359.97438 * 13 12 11 18 18 N 1.35535 * 108.87121 * 0.02562 * 17 13 12 19 19 C 1.53785 * 113.61190 * 209.99892 * 3 2 1 20 20 H 1.08998 * 109.46770 * 299.99902 * 1 2 3 21 21 H 1.09002 * 109.46469 * 60.00081 * 1 2 3 22 22 H 1.09002 * 109.47156 * 180.02562 * 1 2 3 23 23 H 1.08998 * 113.61662 * 25.42433 * 5 3 2 24 24 H 1.08998 * 113.60987 * 254.52541 * 5 3 2 25 25 H 0.96998 * 119.99705 * 287.50431 * 8 6 5 26 26 H 1.07997 * 126.45730 * 359.75831 * 12 11 9 27 27 H 1.08992 * 109.47213 * 305.00165 * 14 13 12 28 28 H 0.96701 * 113.99938 * 59.99592 * 15 14 13 29 29 H 1.48497 * 110.00039 * 58.68195 * 16 14 13 30 30 H 1.48504 * 109.99725 * 180.02562 * 16 14 13 31 31 H 1.07997 * 125.56548 * 179.97438 * 17 13 12 32 32 H 0.97004 * 125.67280 * 180.02562 * 18 17 13 33 33 H 1.08996 * 113.61841 * 105.46801 * 19 3 2 34 34 H 1.09007 * 113.61630 * 334.56703 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3139 2.0788 -0.3238 5 6 2.7536 1.6488 1.3018 6 6 3.8228 2.3180 0.4223 7 1 4.8432 2.1408 0.7621 8 7 3.5534 3.7309 0.1436 9 6 4.2937 4.6879 0.7374 10 8 5.1861 4.3784 1.5047 11 6 4.0236 6.1024 0.4588 12 6 4.6973 7.1810 0.9914 13 6 4.1183 8.3340 0.4524 14 6 4.5291 9.7538 0.7466 15 8 5.8554 9.9758 0.2632 16 14 3.3553 10.9278 -0.0990 17 6 3.1234 7.9483 -0.3820 18 7 3.0554 6.5947 -0.3868 19 6 3.3756 1.3718 -0.7045 20 1 -0.3633 0.5138 0.8900 21 1 -0.3632 0.5138 -0.8900 22 1 -0.3633 -1.0277 0.0005 23 1 3.1167 0.7739 1.8411 24 1 2.2142 2.3476 1.9411 25 1 2.8423 3.9775 -0.4683 26 1 5.5179 7.1425 1.6925 27 1 4.5013 9.9245 1.8227 28 1 5.9544 9.8416 -0.6894 29 1 1.9679 10.6855 0.3716 30 1 3.7500 12.3314 0.1829 31 1 2.4875 8.6112 -0.9500 32 1 2.4291 6.0616 -0.9011 33 1 3.3386 1.8469 -1.6848 34 1 3.9089 0.4211 -0.7138 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_10543058.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:13 Heat of formation + Delta-G solvation = -32.418019 kcal Electronic energy + Delta-G solvation = -18338.513077 eV Core-core repulsion = 15240.108171 eV Total energy + Delta-G solvation = -3098.404906 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -42.55233 -41.16687 -39.51583 -37.64128 -37.34921 -34.21633 -32.49856 -30.71840 -27.99689 -26.90537 -26.65969 -25.41825 -23.92543 -21.33240 -20.96003 -20.73379 -19.97748 -18.09727 -17.51315 -17.03261 -16.90596 -16.56642 -16.42292 -16.16147 -15.76536 -15.58059 -14.94548 -14.70896 -14.42168 -14.22990 -13.94402 -13.71116 -13.60246 -13.50546 -13.40367 -12.31697 -12.24675 -12.09277 -11.97470 -11.66773 -11.19842 -10.58190 -10.36690 -10.27028 -9.99509 -9.35600 -5.06857 0.35613 1.32734 1.46202 1.63712 1.84480 1.94549 2.00606 2.31207 2.72069 3.29823 3.40570 3.59106 3.65755 3.71704 3.74744 3.84570 3.99202 4.23420 4.31258 4.33808 4.34397 4.61545 4.64354 4.65985 4.69551 4.76079 4.82787 4.86974 4.91278 5.02164 5.34422 5.55211 5.75271 6.12360 6.14516 6.34000 6.70246 7.06331 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.060 3.940 4 H 0.084 0.916 5 C -0.166 4.166 6 C 0.122 3.878 7 H 0.116 0.884 8 N -0.717 5.717 9 C 0.594 3.406 10 O -0.519 6.519 11 C -0.060 4.060 12 C -0.073 4.073 13 C -0.211 4.211 14 C -0.033 4.033 15 O -0.542 6.542 16 Si 0.686 3.314 17 C 0.036 3.964 18 N -0.536 5.536 19 C -0.142 4.142 20 H 0.042 0.958 21 H 0.042 0.958 22 H 0.088 0.912 23 H 0.103 0.897 24 H 0.073 0.927 25 H 0.393 0.607 26 H 0.151 0.849 27 H 0.112 0.888 28 H 0.377 0.623 29 H -0.258 1.258 30 H -0.256 1.256 31 H 0.177 0.823 32 H 0.417 0.583 33 H 0.078 0.922 34 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.352 0.111 -5.942 7.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.002 3.998 4 H 0.102 0.898 5 C -0.205 4.205 6 C 0.017 3.983 7 H 0.133 0.867 8 N -0.369 5.369 9 C 0.382 3.618 10 O -0.394 6.394 11 C -0.172 4.172 12 C -0.100 4.100 13 C -0.218 4.218 14 C -0.145 4.145 15 O -0.347 6.347 16 Si 0.588 3.412 17 C -0.100 4.100 18 N -0.132 5.132 19 C -0.180 4.180 20 H 0.061 0.939 21 H 0.060 0.940 22 H 0.106 0.894 23 H 0.122 0.878 24 H 0.092 0.908 25 H 0.227 0.773 26 H 0.169 0.831 27 H 0.129 0.871 28 H 0.224 0.776 29 H -0.182 1.182 30 H -0.180 1.180 31 H 0.194 0.806 32 H 0.255 0.745 33 H 0.097 0.903 34 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -5.146 0.349 -4.706 6.982 hybrid contribution -0.918 -0.258 -0.046 0.955 sum -6.064 0.091 -4.752 7.704 Atomic orbital electron populations 1.22827 0.80854 1.03168 0.99944 1.87968 1.19896 1.26916 1.94533 1.23822 0.93761 0.85554 0.96698 0.89831 1.23992 0.97674 1.01413 0.97445 1.21661 1.00791 0.79125 0.96771 0.86652 1.45570 1.37180 1.05844 1.48261 1.17038 0.81467 0.83189 0.80152 1.90889 1.31228 1.81930 1.35372 1.20373 0.99082 0.93289 1.04444 1.21243 0.99526 0.89308 0.99891 1.19907 1.01192 0.96340 1.04335 1.24376 0.91148 0.95917 1.03068 1.86509 1.27730 1.91960 1.28485 0.95208 0.77198 0.78788 0.89974 1.21879 1.01713 0.83478 1.02968 1.41919 1.28333 1.06975 1.35988 1.23632 0.95764 1.00616 0.97985 0.93939 0.93959 0.89372 0.87832 0.90784 0.77292 0.83144 0.87112 0.77573 1.18245 1.18039 0.80648 0.74505 0.90301 0.87303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.35 10.71 -35.23 -0.38 -0.73 16 3 C 0.06 -0.07 4.19 -25.91 -0.11 -0.18 16 4 H 0.08 -0.25 7.87 -51.93 -0.41 -0.66 16 5 C -0.17 0.08 7.71 -25.92 -0.20 -0.12 16 6 C 0.12 -0.07 4.32 -67.11 -0.29 -0.36 16 7 H 0.12 0.13 7.46 -51.93 -0.39 -0.26 16 8 N -0.72 0.89 5.26 -54.32 -0.29 0.60 16 9 C 0.59 1.27 7.79 -12.85 -0.10 1.17 16 10 O -0.52 -3.32 16.48 5.19 0.09 -3.24 16 11 C -0.06 -0.05 7.06 -81.98 -0.58 -0.63 16 12 C -0.07 -0.15 10.59 -39.12 -0.41 -0.57 16 13 C -0.21 0.01 5.43 -105.02 -0.57 -0.56 16 14 C -0.03 0.01 3.02 36.00 0.11 0.11 16 15 O -0.54 -0.40 12.88 -35.23 -0.45 -0.85 16 16 Si 0.69 -1.32 30.60 -169.99 -5.20 -6.52 16 17 C 0.04 -0.09 10.45 -16.91 -0.18 -0.27 16 18 N -0.54 1.54 5.99 -9.39 -0.06 1.48 16 19 C -0.14 0.25 7.66 -25.91 -0.20 0.06 16 20 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 21 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 22 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 23 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 24 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 25 H 0.39 -1.72 7.83 -40.82 -0.32 -2.04 16 26 H 0.15 0.48 8.06 -52.49 -0.42 0.05 16 27 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 28 H 0.38 -1.25 8.70 45.56 0.40 -0.85 16 29 H -0.26 -0.04 7.11 56.52 0.40 0.36 16 30 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 31 H 0.18 -1.02 6.21 -52.49 -0.33 -1.34 16 32 H 0.42 -2.64 8.19 -40.82 -0.33 -2.97 16 33 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 34 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 LS Contribution 294.47 15.07 4.44 4.44 Total: 0.00 -9.27 294.47 -7.66 -16.92 By element: Atomic # 1 Polarization: -7.44 SS G_CDS: -4.37 Total: -11.81 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -1.43 Total: -0.28 kcal Atomic # 7 Polarization: 2.42 SS G_CDS: -0.34 Total: 2.08 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -0.75 Total: -4.82 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.20 Total: -6.52 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -9.27 -7.66 -16.92 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_10543058.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.495 kcal (2) G-P(sol) polarization free energy of solvation -9.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.762 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.656 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.923 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.418 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds