Wall clock time and date at job start Sat Mar 6 2021 21:10:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42903 * 114.00444 * 2 1 4 4 H 1.08998 * 112.84357 * 18.79803 * 3 2 1 5 5 C 1.53775 * 113.61785 * 149.99861 * 3 2 1 6 6 C 1.53780 * 87.08338 * 89.11569 * 5 3 2 7 7 H 1.09002 * 113.61547 * 270.79910 * 6 5 3 8 8 N 1.46499 * 113.61681 * 139.97900 * 6 5 3 9 9 C 1.34774 * 119.99887 * 155.00359 * 8 6 5 10 10 O 1.21689 * 120.00432 * 5.13042 * 9 8 6 11 11 C 1.46676 * 119.99783 * 185.13781 * 9 8 6 12 12 C 1.37872 * 126.23419 * 5.00211 * 11 9 8 13 13 C 1.39833 * 107.08761 * 180.02562 * 12 11 9 14 14 C 1.50702 * 126.07195 * 180.02562 * 13 12 11 15 15 O 1.42902 * 109.47188 * 300.00389 * 14 13 12 16 16 Si 1.86297 * 109.47545 * 180.02562 * 14 13 12 17 17 C 1.35450 * 107.86476 * 359.97438 * 13 12 11 18 18 N 1.35530 * 108.87264 * 359.97438 * 17 13 12 19 19 C 1.46501 * 125.67923 * 180.25971 * 18 17 13 20 20 C 1.53781 * 87.08112 * 25.43163 * 6 5 3 21 21 H 1.09001 * 109.47008 * 300.00642 * 1 2 3 22 22 H 1.09001 * 109.46682 * 60.00443 * 1 2 3 23 23 H 1.09000 * 109.47067 * 180.02562 * 1 2 3 24 24 H 1.09003 * 113.61448 * 334.56639 * 5 3 2 25 25 H 1.09006 * 113.61015 * 203.66480 * 5 3 2 26 26 H 0.97005 * 119.99743 * 335.00267 * 8 6 5 27 27 H 1.08004 * 126.45876 * 0.02994 * 12 11 9 28 28 H 1.09004 * 109.46997 * 59.99734 * 14 13 12 29 29 H 0.96703 * 113.99491 * 299.99881 * 15 14 13 30 30 H 1.48497 * 109.99949 * 58.67893 * 16 14 13 31 31 H 1.48495 * 110.00153 * 179.97438 * 16 14 13 32 32 H 1.08000 * 125.56680 * 180.02562 * 17 13 12 33 33 H 1.08994 * 109.47614 * 264.22698 * 19 18 17 34 34 H 1.08995 * 109.47054 * 24.23400 * 19 18 17 35 35 H 1.09007 * 109.46768 * 144.23336 * 19 18 17 36 36 H 1.09000 * 113.61937 * 89.11458 * 20 6 5 37 37 H 1.08996 * 113.61765 * 220.02215 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0788 0.3237 5 6 3.3756 1.3719 0.7045 6 6 4.0062 1.0329 -0.6565 7 1 4.1099 -0.0373 -0.8353 8 7 5.2365 1.7780 -0.9351 9 6 6.1522 1.2729 -1.7852 10 8 5.9171 0.2450 -2.3926 11 6 7.4325 1.9622 -1.9782 12 6 7.8715 3.0735 -1.2903 13 6 9.1366 3.3943 -1.7924 14 6 10.0066 4.5388 -1.3404 15 8 9.3179 5.7730 -1.5516 16 14 11.5920 4.5378 -2.3187 17 6 9.4417 2.4931 -2.7565 18 7 8.4149 1.6169 -2.8784 19 6 8.3614 0.4876 -3.8101 20 6 2.7536 1.6487 -1.3018 21 1 -0.3633 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8901 23 1 -0.3633 -1.0277 0.0005 24 1 3.5170 0.5957 1.4567 25 1 3.6311 2.3671 1.0684 26 1 5.3918 2.6349 -0.5078 27 1 7.3388 3.5975 -0.5105 28 1 10.2333 4.4261 -0.2802 29 1 9.0839 5.9397 -2.4750 30 1 11.2943 4.6591 -3.7685 31 1 12.4585 5.6621 -1.8828 32 1 10.3547 2.4750 -3.3332 33 1 7.8243 0.7847 -4.7108 34 1 9.3750 0.1861 -4.0742 35 1 7.8449 -0.3484 -3.3383 36 1 2.8390 2.7196 -1.4864 37 1 2.3928 1.0962 -2.1693 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_10803934.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:15 Heat of formation + Delta-G solvation = -27.268490 kcal Electronic energy + Delta-G solvation = -20302.009428 eV Core-core repulsion = 17048.290204 eV Total energy + Delta-G solvation = -3253.719225 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.53039 -41.01015 -39.49047 -37.81199 -37.08528 -34.54261 -33.59704 -30.83081 -28.37123 -27.71162 -26.80408 -25.97556 -25.38073 -23.30806 -21.17602 -21.14200 -20.24592 -18.83767 -18.02121 -17.72894 -16.92042 -16.79365 -16.70739 -16.20185 -16.07055 -15.82073 -15.42630 -15.29033 -15.01129 -14.61451 -14.33597 -13.98525 -13.57073 -13.53287 -13.43223 -13.28635 -13.15880 -13.11389 -12.46942 -12.36648 -12.01442 -11.77197 -11.46508 -10.98316 -10.55957 -10.45865 -10.06165 -9.67712 -9.24405 -4.93805 0.47068 1.32867 1.57707 1.58475 1.65157 2.01210 2.35524 2.39584 2.60459 3.43499 3.48617 3.54822 3.72531 3.78830 3.81441 3.92569 4.02014 4.18108 4.26712 4.29800 4.37305 4.41329 4.42540 4.56615 4.65986 4.71678 4.72543 4.76103 4.78968 4.91824 5.00037 5.03648 5.19200 5.47582 5.69180 5.91164 6.13165 6.18171 6.50312 6.52537 7.21639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.369 6.369 3 C 0.065 3.935 4 H 0.082 0.918 5 C -0.148 4.148 6 C 0.134 3.866 7 H 0.121 0.879 8 N -0.710 5.710 9 C 0.591 3.409 10 O -0.545 6.545 11 C -0.054 4.054 12 C -0.113 4.113 13 C -0.206 4.206 14 C -0.037 4.037 15 O -0.532 6.532 16 Si 0.680 3.320 17 C 0.027 3.973 18 N -0.404 5.404 19 C 0.065 3.935 20 C -0.171 4.171 21 H 0.044 0.956 22 H 0.043 0.957 23 H 0.089 0.911 24 H 0.086 0.914 25 H 0.099 0.901 26 H 0.403 0.597 27 H 0.145 0.855 28 H 0.115 0.885 29 H 0.374 0.626 30 H -0.260 1.260 31 H -0.258 1.258 32 H 0.173 0.827 33 H 0.078 0.922 34 H 0.088 0.912 35 H 0.103 0.897 36 H 0.093 0.907 37 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.116 0.416 0.676 0.802 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.287 6.287 3 C 0.006 3.994 4 H 0.100 0.900 5 C -0.186 4.186 6 C 0.029 3.971 7 H 0.139 0.861 8 N -0.361 5.361 9 C 0.379 3.621 10 O -0.424 6.424 11 C -0.167 4.167 12 C -0.139 4.139 13 C -0.213 4.213 14 C -0.148 4.148 15 O -0.338 6.338 16 Si 0.581 3.419 17 C -0.109 4.109 18 N -0.076 5.076 19 C -0.076 4.076 20 C -0.211 4.211 21 H 0.063 0.937 22 H 0.062 0.938 23 H 0.107 0.893 24 H 0.105 0.895 25 H 0.117 0.883 26 H 0.239 0.761 27 H 0.163 0.837 28 H 0.132 0.868 29 H 0.222 0.778 30 H -0.185 1.185 31 H -0.183 1.183 32 H 0.190 0.810 33 H 0.096 0.904 34 H 0.106 0.894 35 H 0.122 0.878 36 H 0.112 0.888 37 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.375 -0.353 0.087 0.522 hybrid contribution -1.011 1.315 -0.362 1.697 sum -0.636 0.962 -0.275 1.186 Atomic orbital electron populations 1.22855 0.80375 1.03192 1.00193 1.87900 1.20173 1.26103 1.94537 1.22857 0.94266 0.85788 0.96492 0.89991 1.23639 0.94302 1.03410 0.97230 1.22531 0.81378 0.97980 0.95168 0.86132 1.45665 1.19679 1.24065 1.46671 1.17007 0.82196 0.83712 0.79140 1.90809 1.79342 1.24693 1.47558 1.20063 0.93568 1.02104 1.00968 1.21179 0.96132 0.95643 1.00982 1.19725 0.98309 1.01162 1.02095 1.24274 1.01802 0.81696 1.07020 1.86583 1.77248 1.38128 1.31839 0.95361 0.78522 0.89324 0.78709 1.21867 0.93867 0.93051 1.02156 1.43824 1.13186 1.22693 1.27873 1.22340 1.04198 0.88190 0.92895 1.23994 0.96437 1.01920 0.98702 0.93726 0.93791 0.89273 0.89484 0.88274 0.76124 0.83716 0.86756 0.77840 1.18517 1.18311 0.80979 0.90366 0.89372 0.87849 0.88825 0.90144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.63 10.63 -35.23 -0.37 -1.00 16 3 C 0.06 -0.03 4.38 -25.92 -0.11 -0.14 16 4 H 0.08 -0.16 7.87 -51.93 -0.41 -0.57 16 5 C -0.15 0.18 7.66 -25.92 -0.20 -0.02 16 6 C 0.13 0.09 4.14 -67.12 -0.28 -0.19 16 7 H 0.12 0.38 7.53 -51.93 -0.39 -0.01 16 8 N -0.71 -0.24 5.33 -54.33 -0.29 -0.52 16 9 C 0.59 1.82 7.77 -12.86 -0.10 1.72 16 10 O -0.55 -3.32 14.42 5.20 0.07 -3.24 16 11 C -0.05 -0.11 6.89 -81.98 -0.56 -0.68 16 12 C -0.11 -0.10 10.28 -39.12 -0.40 -0.50 16 13 C -0.21 -0.08 5.44 -105.02 -0.57 -0.65 16 14 C -0.04 0.01 3.02 36.01 0.11 0.12 16 15 O -0.53 -0.66 12.88 -35.23 -0.45 -1.11 16 16 Si 0.68 -0.82 30.59 -169.99 -5.20 -6.02 16 17 C 0.03 0.00 9.92 -16.91 -0.17 -0.17 16 18 N -0.40 -0.49 3.16 -120.24 -0.38 -0.87 16 19 C 0.06 -0.03 10.48 59.85 0.63 0.60 16 20 C -0.17 0.01 7.71 -25.92 -0.20 -0.19 16 21 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 22 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 23 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 24 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.10 -0.32 8.12 -51.93 -0.42 -0.74 16 26 H 0.40 -0.85 7.67 -40.82 -0.31 -1.16 16 27 H 0.15 -0.12 7.49 -52.48 -0.39 -0.51 16 28 H 0.11 -0.09 7.96 -51.93 -0.41 -0.50 16 29 H 0.37 -0.52 8.70 45.56 0.40 -0.12 16 30 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 31 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 32 H 0.17 -0.50 6.19 -52.49 -0.32 -0.83 16 33 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.09 -0.28 8.12 -51.93 -0.42 -0.70 16 35 H 0.10 0.13 6.55 -51.92 -0.34 -0.21 16 36 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 LS Contribution 312.94 15.07 4.72 4.72 Total: 0.00 -7.90 312.94 -7.86 -15.75 By element: Atomic # 1 Polarization: -3.47 SS G_CDS: -5.19 Total: -8.66 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -0.76 Total: 0.97 kcal Atomic # 7 Polarization: -0.73 SS G_CDS: -0.67 Total: -1.40 kcal Atomic # 8 Polarization: -4.60 SS G_CDS: -0.75 Total: -5.36 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.20 Total: -6.02 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -7.90 -7.86 -15.75 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_10803934.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.516 kcal (2) G-P(sol) polarization free energy of solvation -7.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.268 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds