Wall clock time and date at job start Sat Mar 6 2021 21:10:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42903 * 114.00444 * 2 1 4 4 H 1.08998 * 112.84357 * 18.79803 * 3 2 1 5 5 C 1.53775 * 113.61785 * 149.99861 * 3 2 1 6 6 C 1.53780 * 87.08338 * 89.11569 * 5 3 2 7 7 H 1.09002 * 113.61547 * 270.79910 * 6 5 3 8 8 N 1.46499 * 113.61681 * 139.97900 * 6 5 3 9 9 C 1.34774 * 119.99887 * 155.00359 * 8 6 5 10 10 O 1.21689 * 120.00432 * 5.13042 * 9 8 6 11 11 C 1.46676 * 119.99783 * 185.13781 * 9 8 6 12 12 C 1.37872 * 126.23419 * 5.00211 * 11 9 8 13 13 C 1.39833 * 107.08761 * 180.02562 * 12 11 9 14 14 C 1.50702 * 126.07195 * 180.02562 * 13 12 11 15 15 O 1.42902 * 109.47188 * 300.00389 * 14 13 12 16 16 Si 1.86297 * 109.47545 * 180.02562 * 14 13 12 17 17 C 1.35450 * 107.86476 * 359.97438 * 13 12 11 18 18 N 1.35530 * 108.87264 * 359.97438 * 17 13 12 19 19 C 1.46501 * 125.67923 * 180.25971 * 18 17 13 20 20 C 1.53781 * 87.08112 * 25.43163 * 6 5 3 21 21 H 1.09001 * 109.47008 * 300.00642 * 1 2 3 22 22 H 1.09001 * 109.46682 * 60.00443 * 1 2 3 23 23 H 1.09000 * 109.47067 * 180.02562 * 1 2 3 24 24 H 1.09003 * 113.61448 * 334.56639 * 5 3 2 25 25 H 1.09006 * 113.61015 * 203.66480 * 5 3 2 26 26 H 0.97005 * 119.99743 * 335.00267 * 8 6 5 27 27 H 1.08004 * 126.45876 * 0.02994 * 12 11 9 28 28 H 1.09004 * 109.46997 * 59.99734 * 14 13 12 29 29 H 0.96703 * 113.99491 * 299.99881 * 15 14 13 30 30 H 1.48497 * 109.99949 * 58.67893 * 16 14 13 31 31 H 1.48495 * 110.00153 * 179.97438 * 16 14 13 32 32 H 1.08000 * 125.56680 * 180.02562 * 17 13 12 33 33 H 1.08994 * 109.47614 * 264.22698 * 19 18 17 34 34 H 1.08995 * 109.47054 * 24.23400 * 19 18 17 35 35 H 1.09007 * 109.46768 * 144.23336 * 19 18 17 36 36 H 1.09000 * 113.61937 * 89.11458 * 20 6 5 37 37 H 1.08996 * 113.61765 * 220.02215 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0788 0.3237 5 6 3.3756 1.3719 0.7045 6 6 4.0062 1.0329 -0.6565 7 1 4.1099 -0.0373 -0.8353 8 7 5.2365 1.7780 -0.9351 9 6 6.1522 1.2729 -1.7852 10 8 5.9171 0.2450 -2.3926 11 6 7.4325 1.9622 -1.9782 12 6 7.8715 3.0735 -1.2903 13 6 9.1366 3.3943 -1.7924 14 6 10.0066 4.5388 -1.3404 15 8 9.3179 5.7730 -1.5516 16 14 11.5920 4.5378 -2.3187 17 6 9.4417 2.4931 -2.7565 18 7 8.4149 1.6169 -2.8784 19 6 8.3614 0.4876 -3.8101 20 6 2.7536 1.6487 -1.3018 21 1 -0.3633 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8901 23 1 -0.3633 -1.0277 0.0005 24 1 3.5170 0.5957 1.4567 25 1 3.6311 2.3671 1.0684 26 1 5.3918 2.6349 -0.5078 27 1 7.3388 3.5975 -0.5105 28 1 10.2333 4.4261 -0.2802 29 1 9.0839 5.9397 -2.4750 30 1 11.2943 4.6591 -3.7685 31 1 12.4585 5.6621 -1.8828 32 1 10.3547 2.4750 -3.3332 33 1 7.8243 0.7847 -4.7108 34 1 9.3750 0.1861 -4.0742 35 1 7.8449 -0.3484 -3.3383 36 1 2.8390 2.7196 -1.4864 37 1 2.3928 1.0962 -2.1693 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_10803934.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:15 Heat of formation + Delta-G solvation = -28.286270 kcal Electronic energy + Delta-G solvation = -20302.053563 eV Core-core repulsion = 17048.290204 eV Total energy + Delta-G solvation = -3253.763359 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.56540 -41.05381 -39.62007 -37.82964 -37.15562 -34.61500 -33.64350 -30.86383 -28.35356 -27.65935 -26.77473 -26.00786 -25.37534 -23.37189 -21.26076 -21.15203 -20.27116 -18.85919 -18.06234 -17.77697 -16.93339 -16.83637 -16.77165 -16.19866 -16.08822 -15.84218 -15.45680 -15.36851 -15.04813 -14.65676 -14.40438 -14.00072 -13.55228 -13.51928 -13.37518 -13.26638 -13.15868 -13.10275 -12.43888 -12.41268 -12.03489 -11.79410 -11.46430 -11.16816 -10.55123 -10.47141 -10.18071 -9.70172 -9.27337 -4.85026 0.38441 1.38259 1.58035 1.59076 1.69314 2.04913 2.24748 2.32889 2.67593 3.44437 3.54874 3.56890 3.68990 3.80169 3.83553 4.02847 4.05872 4.23420 4.29849 4.34668 4.39293 4.49346 4.53329 4.66462 4.70083 4.74366 4.78410 4.80310 4.82639 4.92736 4.98059 5.00964 5.18402 5.42368 5.67089 5.87584 6.15997 6.24088 6.45388 6.62306 7.09891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.397 6.397 3 C 0.062 3.938 4 H 0.104 0.896 5 C -0.134 4.134 6 C 0.126 3.874 7 H 0.088 0.912 8 N -0.696 5.696 9 C 0.584 3.416 10 O -0.587 6.587 11 C -0.081 4.081 12 C -0.109 4.109 13 C -0.216 4.216 14 C -0.044 4.044 15 O -0.551 6.551 16 Si 0.767 3.233 17 C 0.036 3.964 18 N -0.413 5.413 19 C 0.064 3.936 20 C -0.167 4.167 21 H 0.057 0.943 22 H 0.048 0.952 23 H 0.091 0.909 24 H 0.080 0.920 25 H 0.127 0.873 26 H 0.417 0.583 27 H 0.159 0.841 28 H 0.119 0.881 29 H 0.384 0.616 30 H -0.281 1.281 31 H -0.308 1.308 32 H 0.201 0.799 33 H 0.077 0.923 34 H 0.119 0.881 35 H 0.081 0.919 36 H 0.111 0.889 37 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.319 1.441 1.090 1.835 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.316 6.316 3 C 0.004 3.996 4 H 0.122 0.878 5 C -0.172 4.172 6 C 0.021 3.979 7 H 0.106 0.894 8 N -0.347 5.347 9 C 0.374 3.626 10 O -0.469 6.469 11 C -0.193 4.193 12 C -0.135 4.135 13 C -0.223 4.223 14 C -0.154 4.154 15 O -0.359 6.359 16 Si 0.673 3.327 17 C -0.101 4.101 18 N -0.085 5.085 19 C -0.077 4.077 20 C -0.206 4.206 21 H 0.075 0.925 22 H 0.067 0.933 23 H 0.109 0.891 24 H 0.098 0.902 25 H 0.145 0.855 26 H 0.255 0.745 27 H 0.176 0.824 28 H 0.137 0.863 29 H 0.233 0.767 30 H -0.207 1.207 31 H -0.237 1.237 32 H 0.218 0.782 33 H 0.095 0.905 34 H 0.137 0.863 35 H 0.100 0.900 36 H 0.129 0.871 37 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 0.774 0.677 0.527 1.155 hybrid contribution -1.127 1.045 -0.491 1.614 sum -0.354 1.722 0.036 1.758 Atomic orbital electron populations 1.22981 0.79337 1.03714 1.01025 1.87867 1.21532 1.27588 1.94659 1.22991 0.94930 0.85577 0.96114 0.87848 1.23635 0.93242 1.04635 0.95700 1.22470 0.81819 0.96495 0.97128 0.89392 1.45569 1.19012 1.24314 1.45775 1.17309 0.82935 0.83335 0.79031 1.90783 1.80232 1.26508 1.49360 1.20074 0.93719 1.03056 1.02482 1.21423 0.96402 0.94956 1.00755 1.19838 0.98319 1.01616 1.02495 1.24490 1.02118 0.81020 1.07776 1.86553 1.77608 1.38752 1.32960 0.94348 0.75388 0.86960 0.76021 1.22349 0.94136 0.92044 1.01608 1.44037 1.13315 1.23202 1.27958 1.22389 1.05816 0.87204 0.92248 1.23991 0.95915 1.02492 0.98240 0.92451 0.93318 0.89061 0.90153 0.85494 0.74542 0.82371 0.86277 0.76732 1.20700 1.23654 0.78248 0.90475 0.86301 0.90004 0.87112 0.92191 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 113.37 1.23 1.20 16 2 O -0.40 -1.70 10.63 -148.98 -1.58 -3.28 16 3 C 0.06 -0.05 4.38 31.12 0.14 0.08 16 4 H 0.10 -0.54 7.87 -2.39 -0.02 -0.56 16 5 C -0.13 0.36 7.66 31.12 0.24 0.59 16 6 C 0.13 0.33 4.14 45.52 0.19 0.52 16 7 H 0.09 0.83 7.53 -2.39 -0.02 0.82 16 8 N -0.70 -1.03 5.33 -444.01 -2.37 -3.40 16 9 C 0.58 4.55 7.77 86.45 0.67 5.23 16 10 O -0.59 -8.79 14.42 -4.31 -0.06 -8.85 16 11 C -0.08 -0.39 6.89 40.35 0.28 -0.11 16 12 C -0.11 -0.15 10.28 22.57 0.23 0.08 16 13 C -0.22 0.04 5.44 -20.12 -0.11 -0.07 16 14 C -0.04 0.06 3.02 71.24 0.22 0.28 16 15 O -0.55 -1.00 12.88 -148.98 -1.92 -2.92 16 16 Si 0.77 -2.57 30.59 68.60 2.10 -0.47 16 17 C 0.04 -0.05 9.92 83.48 0.83 0.78 16 18 N -0.41 -1.03 3.16 -534.32 -1.69 -2.72 16 19 C 0.06 -0.02 10.48 127.77 1.34 1.32 16 20 C -0.17 -0.11 7.71 31.12 0.24 0.13 16 21 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 22 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 23 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 24 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 25 H 0.13 -1.05 8.12 -2.38 -0.02 -1.07 16 26 H 0.42 -1.87 7.67 -92.70 -0.71 -2.58 16 27 H 0.16 -0.39 7.49 -2.91 -0.02 -0.41 16 28 H 0.12 -0.30 7.96 -2.38 -0.02 -0.32 16 29 H 0.38 -1.29 8.70 -74.06 -0.64 -1.94 16 30 H -0.28 -0.02 7.11 99.48 0.71 0.69 16 31 H -0.31 -1.59 7.11 99.48 0.71 -0.88 16 32 H 0.20 -1.61 6.19 -2.91 -0.02 -1.63 16 33 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 34 H 0.12 -0.85 8.12 -2.39 -0.02 -0.87 16 35 H 0.08 0.37 6.55 -2.38 -0.02 0.35 16 36 H 0.11 -0.33 8.14 -2.39 -0.02 -0.35 16 37 H 0.06 0.29 8.14 -2.39 -0.02 0.27 16 Total: 0.00 -20.62 312.94 -0.26 -20.88 By element: Atomic # 1 Polarization: -9.03 SS G_CDS: -0.23 Total: -9.26 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: 5.49 Total: 10.03 kcal Atomic # 7 Polarization: -2.06 SS G_CDS: -4.06 Total: -6.12 kcal Atomic # 8 Polarization: -11.50 SS G_CDS: -3.56 Total: -15.06 kcal Atomic # 14 Polarization: -2.57 SS G_CDS: 2.10 Total: -0.47 kcal Total: -20.62 -0.26 -20.88 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_10803934.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.402 kcal (2) G-P(sol) polarization free energy of solvation -20.623 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.025 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.262 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.885 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.286 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds