Wall clock time and date at job start Sat Mar 6 2021 21:10:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42900 * 114.00304 * 2 1 4 4 H 1.09007 * 112.90647 * 341.24752 * 3 2 1 5 5 C 1.54049 * 113.62405 * 112.50160 * 3 2 1 6 6 C 1.53775 * 86.98625 * 139.98007 * 5 3 2 7 7 H 1.09004 * 113.61557 * 219.98015 * 6 5 3 8 8 N 1.46502 * 113.61425 * 89.16485 * 6 5 3 9 9 C 1.34781 * 120.00186 * 105.86446 * 8 6 5 10 10 O 1.21697 * 119.99784 * 5.06347 * 9 8 6 11 11 C 1.46669 * 120.00080 * 185.06661 * 9 8 6 12 12 C 1.37878 * 126.23434 * 354.47300 * 11 9 8 13 13 C 1.39832 * 107.08765 * 179.97438 * 12 11 9 14 14 C 1.35463 * 107.86397 * 0.22669 * 13 12 11 15 15 C 1.50699 * 125.56473 * 179.77770 * 14 13 12 16 16 O 1.42901 * 109.46761 * 210.02558 * 15 14 13 17 17 Si 1.86300 * 109.46780 * 330.01972 * 15 14 13 18 18 N 1.35536 * 108.86914 * 359.62785 * 14 13 12 19 19 C 1.46499 * 125.67734 * 180.17033 * 18 14 13 20 20 C 1.53782 * 87.17669 * 334.57092 * 6 5 3 21 21 H 1.08998 * 109.47103 * 300.00441 * 1 2 3 22 22 H 1.09002 * 109.46922 * 60.00075 * 1 2 3 23 23 H 1.08998 * 109.47564 * 179.97438 * 1 2 3 24 24 H 1.09005 * 113.61388 * 25.47577 * 5 3 2 25 25 H 1.09004 * 113.69755 * 254.49808 * 5 3 2 26 26 H 0.96999 * 119.99702 * 285.85656 * 8 6 5 27 27 H 1.08000 * 126.45590 * 359.95620 * 12 11 9 28 28 H 1.08001 * 126.07242 * 179.97438 * 13 12 11 29 29 H 1.08995 * 109.47157 * 90.01894 * 15 14 13 30 30 H 0.96698 * 114.00017 * 59.99862 * 16 15 14 31 31 H 1.48506 * 109.99919 * 180.02562 * 17 15 14 32 32 H 1.48499 * 110.00323 * 301.31876 * 17 15 14 33 33 H 1.08998 * 109.46769 * 274.79990 * 19 18 14 34 34 H 1.09006 * 109.47040 * 34.79500 * 19 18 14 35 35 H 1.08991 * 109.47287 * 154.79353 * 19 18 14 36 36 H 1.09000 * 113.61086 * 140.02103 * 20 6 5 37 37 H 1.08993 * 113.61345 * 270.84235 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3142 2.0798 -0.3228 5 6 2.7548 1.6496 1.3039 6 6 3.8227 2.3181 0.4222 7 1 4.8431 2.1409 0.7621 8 7 3.5532 3.7309 0.1435 9 6 4.2731 4.6888 0.7608 10 8 5.2066 4.3810 1.4783 11 6 3.9312 6.1020 0.5678 12 6 2.9757 6.5991 -0.2930 13 6 2.9831 7.9907 -0.1555 14 6 3.9256 8.3126 0.7627 15 6 4.2706 9.7090 1.2121 16 8 5.6482 9.7616 1.5882 17 14 3.9617 10.9044 -0.1830 18 7 4.5054 7.1735 1.2136 19 6 5.5694 7.0958 2.2176 20 6 3.3756 1.3718 -0.7045 21 1 -0.3633 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3634 -1.0276 -0.0005 24 1 3.1187 0.7748 1.8429 25 1 2.2168 2.3489 1.9441 26 1 2.8569 3.9770 -0.4853 27 1 2.3414 6.0225 -0.9499 28 1 2.3525 8.6858 -0.6899 29 1 3.6500 9.9794 2.0664 30 1 6.2596 9.5321 0.8751 31 1 4.2987 12.2852 0.2473 32 1 4.7782 10.5277 -1.3648 33 1 6.5367 7.2272 1.7326 34 1 5.4259 7.8805 2.9605 35 1 5.5373 6.1223 2.7065 36 1 3.3385 1.8470 -1.6848 37 1 3.9099 0.4219 -0.7146 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_10803936.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:17 Heat of formation + Delta-G solvation = -28.822603 kcal Electronic energy + Delta-G solvation = -20512.400303 eV Core-core repulsion = 17258.613687 eV Total energy + Delta-G solvation = -3253.786616 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.61769 -41.12180 -39.47948 -37.92282 -37.27645 -34.46819 -33.49264 -31.30573 -28.00797 -27.48326 -26.98887 -26.78945 -24.96148 -23.28834 -21.64995 -20.70727 -20.38478 -18.93681 -18.34483 -17.82245 -17.00867 -16.86834 -16.74337 -16.23910 -16.09125 -15.93540 -15.40200 -15.17375 -14.83487 -14.44124 -14.28443 -14.15803 -13.81887 -13.65926 -13.56136 -13.39933 -13.23075 -12.95973 -12.42164 -12.24571 -12.01683 -11.97868 -11.59938 -11.15555 -10.84603 -10.50942 -10.16478 -9.76728 -9.11863 -5.00730 0.38191 1.08995 1.48170 1.63431 1.70492 1.94302 2.30126 2.35663 2.79364 3.08977 3.36474 3.47807 3.51655 3.67223 3.79180 3.83741 3.96162 4.28612 4.31560 4.33847 4.40893 4.41734 4.42007 4.47202 4.68933 4.71921 4.72454 4.76236 4.87124 4.90085 4.94806 4.97397 5.11202 5.43641 5.67268 5.95048 6.10400 6.19831 6.20572 6.41335 7.13955 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.060 3.940 4 H 0.087 0.913 5 C -0.167 4.167 6 C 0.123 3.877 7 H 0.113 0.887 8 N -0.704 5.704 9 C 0.594 3.406 10 O -0.543 6.543 11 C -0.054 4.054 12 C -0.135 4.135 13 C -0.198 4.198 14 C 0.014 3.986 15 C -0.057 4.057 16 O -0.533 6.533 17 Si 0.718 3.282 18 N -0.392 5.392 19 C 0.067 3.933 20 C -0.142 4.142 21 H 0.042 0.958 22 H 0.043 0.957 23 H 0.087 0.913 24 H 0.102 0.898 25 H 0.074 0.926 26 H 0.403 0.597 27 H 0.146 0.854 28 H 0.154 0.846 29 H 0.124 0.876 30 H 0.377 0.623 31 H -0.255 1.255 32 H -0.257 1.257 33 H 0.075 0.925 34 H 0.091 0.909 35 H 0.100 0.900 36 H 0.080 0.920 37 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.650 1.192 -2.692 5.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.002 3.998 4 H 0.105 0.895 5 C -0.206 4.206 6 C 0.017 3.983 7 H 0.131 0.869 8 N -0.355 5.355 9 C 0.383 3.617 10 O -0.422 6.422 11 C -0.168 4.168 12 C -0.161 4.161 13 C -0.221 4.221 14 C -0.104 4.104 15 C -0.166 4.166 16 O -0.339 6.339 17 Si 0.616 3.384 18 N -0.064 5.064 19 C -0.074 4.074 20 C -0.180 4.180 21 H 0.061 0.939 22 H 0.061 0.939 23 H 0.105 0.895 24 H 0.120 0.880 25 H 0.093 0.907 26 H 0.239 0.761 27 H 0.164 0.836 28 H 0.171 0.829 29 H 0.141 0.859 30 H 0.225 0.775 31 H -0.179 1.179 32 H -0.181 1.181 33 H 0.093 0.907 34 H 0.110 0.890 35 H 0.119 0.881 36 H 0.099 0.901 37 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -3.468 1.508 -1.840 4.206 hybrid contribution 0.475 -0.225 -0.164 0.550 sum -2.993 1.284 -2.004 3.824 Atomic orbital electron populations 1.22822 0.80859 1.03084 1.00031 1.87956 1.19910 1.27009 1.94527 1.23881 0.93806 0.85568 0.96521 0.89492 1.24043 0.97722 1.01301 0.97496 1.21640 1.00606 0.79116 0.96895 0.86925 1.45294 1.38927 1.05084 1.46206 1.16964 0.81584 0.83718 0.79444 1.90808 1.28981 1.83310 1.39061 1.19993 1.03763 0.88081 1.04940 1.21291 0.99315 0.94879 1.00648 1.20552 1.02800 0.95772 1.03013 1.21146 0.99910 0.88420 1.00905 1.24927 0.84946 0.95745 1.10948 1.86596 1.15075 1.91504 1.40729 0.94439 0.91746 0.76685 0.75485 1.43760 1.28329 1.04283 1.30074 1.22353 0.88602 1.05567 0.90888 1.23613 0.95791 1.00463 0.98103 0.93916 0.93884 0.89464 0.87982 0.90737 0.76134 0.83587 0.82862 0.85867 0.77464 1.17923 1.18147 0.90670 0.89037 0.88116 0.90130 0.87413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.49 10.71 -35.23 -0.38 -0.87 16 3 C 0.06 -0.05 4.20 -25.77 -0.11 -0.15 16 4 H 0.09 -0.20 7.87 -51.92 -0.41 -0.61 16 5 C -0.17 0.03 7.73 -25.78 -0.20 -0.17 16 6 C 0.12 -0.01 4.33 -67.12 -0.29 -0.30 16 7 H 0.11 0.16 7.45 -51.93 -0.39 -0.22 16 8 N -0.70 0.22 5.25 -54.32 -0.29 -0.07 16 9 C 0.59 1.61 7.77 -12.86 -0.10 1.51 16 10 O -0.54 -3.18 14.24 5.19 0.07 -3.11 16 11 C -0.05 -0.11 6.88 -81.98 -0.56 -0.67 16 12 C -0.13 0.03 10.35 -39.12 -0.41 -0.38 16 13 C -0.20 0.11 9.37 -39.98 -0.37 -0.26 16 14 C 0.01 0.01 6.14 -81.95 -0.50 -0.50 16 15 C -0.06 0.05 2.90 36.01 0.10 0.15 16 16 O -0.53 -0.08 10.51 -35.23 -0.37 -0.45 16 17 Si 0.72 -1.35 31.10 -169.99 -5.29 -6.64 16 18 N -0.39 -0.77 3.16 -115.62 -0.37 -1.13 16 19 C 0.07 0.09 9.26 59.85 0.55 0.64 16 20 C -0.14 0.18 7.65 -25.91 -0.20 -0.02 16 21 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 22 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 23 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 24 H 0.10 0.03 8.14 -51.93 -0.42 -0.40 16 25 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 26 H 0.40 -1.15 7.61 -40.82 -0.31 -1.46 16 27 H 0.15 -0.46 7.45 -52.49 -0.39 -0.85 16 28 H 0.15 -0.53 6.85 -52.49 -0.36 -0.89 16 29 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 30 H 0.38 -0.75 8.70 45.56 0.40 -0.35 16 31 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 32 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 33 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.09 0.06 7.13 -51.93 -0.37 -0.31 16 35 H 0.10 0.28 6.19 -51.93 -0.32 -0.04 16 36 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 37 H 0.11 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 308.98 15.07 4.66 4.66 Total: 0.00 -7.57 308.98 -8.09 -15.66 By element: Atomic # 1 Polarization: -3.81 SS G_CDS: -5.14 Total: -8.96 kcal Atomic # 6 Polarization: 1.91 SS G_CDS: -0.99 Total: 0.92 kcal Atomic # 7 Polarization: -0.55 SS G_CDS: -0.65 Total: -1.20 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -0.67 Total: -4.43 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.29 Total: -6.64 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -7.57 -8.09 -15.66 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_10803936.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.168 kcal (2) G-P(sol) polarization free energy of solvation -7.567 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.734 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.655 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds