Wall clock time and date at job start Sat Mar 6 2021 21:10:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42900 * 114.00304 * 2 1 4 4 H 1.09007 * 112.90647 * 341.24752 * 3 2 1 5 5 C 1.54049 * 113.62405 * 112.50160 * 3 2 1 6 6 C 1.53775 * 86.98625 * 139.98007 * 5 3 2 7 7 H 1.09004 * 113.61557 * 219.98015 * 6 5 3 8 8 N 1.46502 * 113.61425 * 89.16485 * 6 5 3 9 9 C 1.34781 * 120.00186 * 105.86446 * 8 6 5 10 10 O 1.21697 * 119.99784 * 5.06347 * 9 8 6 11 11 C 1.46669 * 120.00080 * 185.06661 * 9 8 6 12 12 C 1.37878 * 126.23434 * 354.47300 * 11 9 8 13 13 C 1.39832 * 107.08765 * 179.97438 * 12 11 9 14 14 C 1.35463 * 107.86397 * 0.22669 * 13 12 11 15 15 C 1.50699 * 125.56473 * 179.77770 * 14 13 12 16 16 O 1.42901 * 109.46761 * 210.02558 * 15 14 13 17 17 Si 1.86300 * 109.46780 * 330.01972 * 15 14 13 18 18 N 1.35536 * 108.86914 * 359.62785 * 14 13 12 19 19 C 1.46499 * 125.67734 * 180.17033 * 18 14 13 20 20 C 1.53782 * 87.17669 * 334.57092 * 6 5 3 21 21 H 1.08998 * 109.47103 * 300.00441 * 1 2 3 22 22 H 1.09002 * 109.46922 * 60.00075 * 1 2 3 23 23 H 1.08998 * 109.47564 * 179.97438 * 1 2 3 24 24 H 1.09005 * 113.61388 * 25.47577 * 5 3 2 25 25 H 1.09004 * 113.69755 * 254.49808 * 5 3 2 26 26 H 0.96999 * 119.99702 * 285.85656 * 8 6 5 27 27 H 1.08000 * 126.45590 * 359.95620 * 12 11 9 28 28 H 1.08001 * 126.07242 * 179.97438 * 13 12 11 29 29 H 1.08995 * 109.47157 * 90.01894 * 15 14 13 30 30 H 0.96698 * 114.00017 * 59.99862 * 16 15 14 31 31 H 1.48506 * 109.99919 * 180.02562 * 17 15 14 32 32 H 1.48499 * 110.00323 * 301.31876 * 17 15 14 33 33 H 1.08998 * 109.46769 * 274.79990 * 19 18 14 34 34 H 1.09006 * 109.47040 * 34.79500 * 19 18 14 35 35 H 1.08991 * 109.47287 * 154.79353 * 19 18 14 36 36 H 1.09000 * 113.61086 * 140.02103 * 20 6 5 37 37 H 1.08993 * 113.61345 * 270.84235 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3142 2.0798 -0.3228 5 6 2.7548 1.6496 1.3039 6 6 3.8227 2.3181 0.4222 7 1 4.8431 2.1409 0.7621 8 7 3.5532 3.7309 0.1435 9 6 4.2731 4.6888 0.7608 10 8 5.2066 4.3810 1.4783 11 6 3.9312 6.1020 0.5678 12 6 2.9757 6.5991 -0.2930 13 6 2.9831 7.9907 -0.1555 14 6 3.9256 8.3126 0.7627 15 6 4.2706 9.7090 1.2121 16 8 5.6482 9.7616 1.5882 17 14 3.9617 10.9044 -0.1830 18 7 4.5054 7.1735 1.2136 19 6 5.5694 7.0958 2.2176 20 6 3.3756 1.3718 -0.7045 21 1 -0.3633 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3634 -1.0276 -0.0005 24 1 3.1187 0.7748 1.8429 25 1 2.2168 2.3489 1.9441 26 1 2.8569 3.9770 -0.4853 27 1 2.3414 6.0225 -0.9499 28 1 2.3525 8.6858 -0.6899 29 1 3.6500 9.9794 2.0664 30 1 6.2596 9.5321 0.8751 31 1 4.2987 12.2852 0.2473 32 1 4.7782 10.5277 -1.3648 33 1 6.5367 7.2272 1.7326 34 1 5.4259 7.8805 2.9605 35 1 5.5373 6.1223 2.7065 36 1 3.3385 1.8470 -1.6848 37 1 3.9099 0.4219 -0.7146 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_10803936.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:17 Heat of formation + Delta-G solvation = -29.203745 kcal Electronic energy + Delta-G solvation = -20512.416831 eV Core-core repulsion = 17258.613687 eV Total energy + Delta-G solvation = -3253.803144 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.62985 -41.14452 -39.57194 -37.89776 -37.31088 -34.52363 -33.54061 -31.29386 -27.93781 -27.51806 -26.98795 -26.74642 -24.93154 -23.31438 -21.64197 -20.76065 -20.37278 -18.94651 -18.34869 -17.81816 -17.05153 -16.92578 -16.71151 -16.23398 -16.09080 -15.92579 -15.42596 -15.25051 -14.82884 -14.47896 -14.26333 -14.14032 -13.79902 -13.67051 -13.50920 -13.37447 -13.26481 -12.98107 -12.42776 -12.18149 -11.97465 -11.96811 -11.56674 -11.26686 -10.89058 -10.47544 -10.24033 -9.76317 -9.12044 -4.87553 0.32624 1.17883 1.49125 1.72720 1.75567 2.00939 2.26157 2.29544 2.87453 3.18642 3.40652 3.51079 3.56488 3.66626 3.81203 3.92951 3.94961 4.24860 4.34593 4.38233 4.48837 4.49378 4.52764 4.56370 4.63145 4.72810 4.74698 4.85727 4.91273 4.92773 4.98230 5.08672 5.17511 5.41804 5.71496 5.97138 6.11422 6.27887 6.30705 6.42441 7.06513 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.400 6.400 3 C 0.063 3.937 4 H 0.108 0.892 5 C -0.167 4.167 6 C 0.121 3.879 7 H 0.091 0.909 8 N -0.687 5.687 9 C 0.589 3.411 10 O -0.587 6.587 11 C -0.086 4.086 12 C -0.123 4.123 13 C -0.201 4.201 14 C 0.008 3.992 15 C -0.068 4.068 16 O -0.549 6.549 17 Si 0.817 3.183 18 N -0.408 5.408 19 C 0.074 3.926 20 C -0.132 4.132 21 H 0.046 0.954 22 H 0.056 0.944 23 H 0.090 0.910 24 H 0.093 0.907 25 H 0.070 0.930 26 H 0.418 0.582 27 H 0.177 0.823 28 H 0.186 0.814 29 H 0.132 0.868 30 H 0.385 0.615 31 H -0.298 1.298 32 H -0.292 1.292 33 H 0.076 0.924 34 H 0.095 0.905 35 H 0.081 0.919 36 H 0.097 0.903 37 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.333 1.801 -4.041 7.725 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.319 6.319 3 C 0.006 3.994 4 H 0.126 0.874 5 C -0.206 4.206 6 C 0.015 3.985 7 H 0.109 0.891 8 N -0.339 5.339 9 C 0.379 3.621 10 O -0.469 6.469 11 C -0.199 4.199 12 C -0.149 4.149 13 C -0.224 4.224 14 C -0.110 4.110 15 C -0.176 4.176 16 O -0.356 6.356 17 Si 0.720 3.280 18 N -0.081 5.081 19 C -0.067 4.067 20 C -0.170 4.170 21 H 0.065 0.935 22 H 0.075 0.925 23 H 0.108 0.892 24 H 0.111 0.889 25 H 0.088 0.912 26 H 0.256 0.744 27 H 0.195 0.805 28 H 0.203 0.797 29 H 0.150 0.850 30 H 0.234 0.766 31 H -0.226 1.226 32 H -0.218 1.218 33 H 0.095 0.905 34 H 0.114 0.886 35 H 0.099 0.901 36 H 0.115 0.885 37 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -5.196 2.084 -3.204 6.451 hybrid contribution 1.011 -0.384 0.265 1.114 sum -4.185 1.700 -2.938 5.389 Atomic orbital electron populations 1.22958 0.79815 1.03657 1.00877 1.87923 1.21232 1.28129 1.94611 1.23970 0.94227 0.85524 0.95724 0.87380 1.24013 0.97861 1.00845 0.97922 1.21574 0.99574 0.79472 0.97834 0.89069 1.45147 1.38566 1.04498 1.45680 1.17247 0.81250 0.84598 0.79048 1.90783 1.30984 1.83971 1.41144 1.20148 1.05398 0.87706 1.06649 1.21744 0.98213 0.95359 0.99603 1.21029 1.02572 0.96246 1.02564 1.21524 1.00003 0.88445 1.01039 1.25270 0.84578 0.95561 1.12158 1.86571 1.15821 1.91551 1.41666 0.93349 0.89892 0.72635 0.72129 1.43905 1.28764 1.04925 1.30517 1.22206 0.88985 1.04483 0.91075 1.23546 0.95297 0.99852 0.98339 0.93506 0.92548 0.89169 0.88899 0.91171 0.74390 0.80536 0.79717 0.85015 0.76625 1.22589 1.21838 0.90514 0.88643 0.90069 0.88467 0.87884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.40 -0.93 10.71 -148.98 -1.60 -2.53 16 3 C 0.06 -0.13 4.20 31.21 0.13 0.00 16 4 H 0.11 -0.70 7.87 -2.38 -0.02 -0.72 16 5 C -0.17 -0.09 7.73 31.21 0.24 0.15 16 6 C 0.12 0.08 4.33 45.52 0.20 0.27 16 7 H 0.09 0.48 7.45 -2.39 -0.02 0.46 16 8 N -0.69 0.33 5.25 -444.00 -2.33 -2.00 16 9 C 0.59 3.90 7.77 86.44 0.67 4.57 16 10 O -0.59 -8.42 14.24 -4.34 -0.06 -8.48 16 11 C -0.09 -0.36 6.88 40.35 0.28 -0.08 16 12 C -0.12 0.25 10.35 22.57 0.23 0.49 16 13 C -0.20 0.61 9.37 22.01 0.21 0.82 16 14 C 0.01 0.00 6.14 41.34 0.25 0.26 16 15 C -0.07 0.15 2.90 71.24 0.21 0.36 16 16 O -0.55 -0.38 10.51 -148.98 -1.57 -1.95 16 17 Si 0.82 -3.75 31.10 68.60 2.13 -1.61 16 18 N -0.41 -1.88 3.16 -519.71 -1.64 -3.52 16 19 C 0.07 0.33 9.26 127.77 1.18 1.52 16 20 C -0.13 0.37 7.65 31.12 0.24 0.61 16 21 H 0.05 -0.18 8.14 -2.39 -0.02 -0.19 16 22 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 23 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 24 H 0.09 0.21 8.14 -2.38 -0.02 0.19 16 25 H 0.07 0.09 8.14 -2.38 -0.02 0.07 16 26 H 0.42 -2.91 7.61 -92.71 -0.71 -3.62 16 27 H 0.18 -1.65 7.45 -2.91 -0.02 -1.67 16 28 H 0.19 -1.89 6.85 -2.91 -0.02 -1.91 16 29 H 0.13 -0.54 7.96 -2.39 -0.02 -0.56 16 30 H 0.38 -1.28 8.70 -74.06 -0.64 -1.93 16 31 H -0.30 -0.80 7.11 99.48 0.71 -0.09 16 32 H -0.29 -0.35 7.11 99.48 0.71 0.36 16 33 H 0.08 0.25 8.14 -2.39 -0.02 0.23 16 34 H 0.10 0.28 7.13 -2.38 -0.02 0.26 16 35 H 0.08 0.69 6.19 -2.39 -0.01 0.68 16 36 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 37 H 0.10 -0.16 8.14 -2.39 -0.02 -0.18 16 Total: 0.00 -19.66 308.98 -0.21 -19.87 By element: Atomic # 1 Polarization: -9.69 SS G_CDS: -0.22 Total: -9.91 kcal Atomic # 6 Polarization: 5.06 SS G_CDS: 5.07 Total: 10.13 kcal Atomic # 7 Polarization: -1.55 SS G_CDS: -3.97 Total: -5.52 kcal Atomic # 8 Polarization: -9.73 SS G_CDS: -3.22 Total: -12.96 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: 2.13 Total: -1.61 kcal Total: -19.66 -0.21 -19.87 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_10803936.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.330 kcal (2) G-P(sol) polarization free energy of solvation -19.660 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.874 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds