Wall clock time and date at job start Sat Mar 6 2021 21:10:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42894 * 114.00157 * 2 1 4 4 H 1.09001 * 112.90633 * 18.74996 * 3 2 1 5 5 C 1.53780 * 113.61666 * 149.99716 * 3 2 1 6 6 C 1.53781 * 87.08099 * 89.11575 * 5 3 2 7 7 H 1.08993 * 113.61691 * 270.80585 * 6 5 3 8 8 N 1.46503 * 113.61406 * 139.97896 * 6 5 3 9 9 C 1.34776 * 119.99874 * 155.00528 * 8 6 5 10 10 O 1.21723 * 119.99773 * 359.97438 * 9 8 6 11 11 C 1.46561 * 120.00215 * 180.02562 * 9 8 6 12 12 C 1.40859 * 126.58343 * 180.02562 * 11 9 8 13 13 C 1.40085 * 132.86377 * 0.02562 * 12 11 9 14 14 C 1.36444 * 119.25663 * 180.02562 * 13 12 11 15 15 C 1.50697 * 120.30006 * 179.97438 * 14 13 12 16 16 O 1.42891 * 109.47792 * 120.02049 * 15 14 13 17 17 Si 1.86302 * 109.47154 * 240.02263 * 15 14 13 18 18 C 1.40161 * 119.40783 * 0.02562 * 14 13 12 19 19 C 1.35183 * 120.31854 * 359.97438 * 18 14 13 20 20 N 1.36245 * 120.70733 * 0.02562 * 19 18 14 21 21 N 1.40015 * 132.01451 * 179.68582 * 20 19 18 22 22 C 1.30741 * 109.60322 * 179.89622 * 21 20 19 23 23 C 1.53774 * 113.61476 * 247.49800 * 3 2 1 24 24 H 1.09006 * 109.47244 * 299.99933 * 1 2 3 25 25 H 1.08999 * 109.47469 * 60.00145 * 1 2 3 26 26 H 1.09009 * 109.47282 * 180.02562 * 1 2 3 27 27 H 1.09004 * 113.61610 * 334.57184 * 5 3 2 28 28 H 1.09004 * 113.69351 * 203.67498 * 5 3 2 29 29 H 0.96996 * 120.00063 * 335.00487 * 8 6 5 30 30 H 1.08006 * 120.37256 * 0.02562 * 13 12 11 31 31 H 1.09001 * 109.47050 * 0.02562 * 15 14 13 32 32 H 0.96705 * 114.00366 * 60.00099 * 16 15 14 33 33 H 1.48506 * 110.00020 * 58.67856 * 17 15 14 34 34 H 1.48499 * 110.00136 * 179.97438 * 17 15 14 35 35 H 1.08002 * 119.84237 * 179.97438 * 18 14 13 36 36 H 1.08003 * 119.65060 * 180.02562 * 19 18 14 37 37 H 1.08004 * 125.62637 * 180.17884 * 22 21 20 38 38 H 1.09001 * 113.61823 * 156.33777 * 23 3 2 39 39 H 1.09001 * 113.61810 * 25.42903 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3142 2.0797 0.3227 5 6 3.3755 1.3719 0.7046 6 6 4.0061 1.0329 -0.6564 7 1 4.1097 -0.0372 -0.8353 8 7 5.2363 1.7781 -0.9350 9 6 6.1522 1.2731 -1.7852 10 8 5.9573 0.1977 -2.3211 11 6 7.3832 2.0182 -2.0635 12 6 8.4270 1.6239 -2.9232 13 6 8.6237 0.4938 -3.7273 14 6 9.7660 0.3922 -4.4666 15 6 10.0020 -0.8135 -5.3394 16 8 10.1411 -0.3975 -6.6993 17 14 11.5579 -1.6806 -4.7931 18 6 10.7185 1.4187 -4.4064 19 6 10.5075 2.5002 -3.6233 20 7 9.3701 2.6108 -2.8814 21 7 8.9173 3.6021 -2.0023 22 6 7.7494 3.2627 -1.5226 23 6 2.7534 1.6488 -1.3017 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3634 -1.0277 0.0005 27 1 3.5170 0.5957 1.4567 28 1 3.6323 2.3665 1.0692 29 1 5.3917 2.6349 -0.5077 30 1 7.8796 -0.2882 -3.7617 31 1 9.1564 -1.4958 -5.2529 32 1 10.8760 0.2126 -6.8508 33 1 11.4383 -2.0903 -3.3707 34 1 11.8015 -2.8718 -5.6455 35 1 11.6253 1.3452 -4.9883 36 1 11.2485 3.2850 -3.5853 37 1 7.1641 3.8416 -0.8234 38 1 2.8390 2.7196 -1.4862 39 1 2.3927 1.0962 -2.1693 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_11618758.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:20 Heat of formation + Delta-G solvation = 28.568104 kcal Electronic energy + Delta-G solvation = -24193.558497 eV Core-core repulsion = 20492.156197 eV Total energy + Delta-G solvation = -3701.402301 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.126 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -43.28890 -41.03263 -39.68237 -39.19700 -37.26388 -37.02048 -34.27505 -33.86848 -32.09023 -30.32742 -27.77357 -27.30659 -26.73909 -25.64848 -24.74113 -23.44785 -22.98131 -21.25477 -20.76783 -19.02485 -18.57076 -18.15400 -17.74297 -17.40886 -16.95624 -16.82077 -16.56224 -16.19264 -16.00679 -15.86154 -15.45209 -15.37731 -14.87229 -14.65822 -14.54443 -14.19790 -14.00190 -13.57165 -13.48484 -13.36635 -13.16910 -13.07780 -12.45743 -12.39516 -12.15906 -11.96345 -11.93229 -11.51419 -11.39231 -10.81092 -10.71036 -10.51073 -10.32534 -9.91444 -8.76196 -5.18045 -0.55648 -0.14711 1.00579 1.07939 1.13305 1.58132 1.88193 2.06747 2.33295 2.61278 2.65053 3.06540 3.17673 3.33920 3.44604 3.51360 3.60682 3.65136 3.85232 3.87164 3.98299 4.06882 4.12797 4.23644 4.28313 4.38394 4.45354 4.46469 4.50398 4.60945 4.72151 4.75839 4.80787 4.98214 5.06004 5.07581 5.13923 5.16177 5.28434 5.63520 5.64853 6.22495 6.31375 6.38219 6.66746 7.44567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.368 6.368 3 C 0.065 3.935 4 H 0.081 0.919 5 C -0.148 4.148 6 C 0.134 3.866 7 H 0.121 0.879 8 N -0.720 5.720 9 C 0.601 3.399 10 O -0.549 6.549 11 C -0.316 4.316 12 C 0.169 3.831 13 C -0.096 4.096 14 C -0.068 4.068 15 C -0.069 4.069 16 O -0.531 6.531 17 Si 0.699 3.301 18 C -0.157 4.157 19 C 0.122 3.878 20 N -0.267 5.267 21 N -0.313 5.313 22 C 0.120 3.880 23 C -0.172 4.172 24 H 0.044 0.956 25 H 0.043 0.957 26 H 0.088 0.912 27 H 0.085 0.915 28 H 0.097 0.903 29 H 0.398 0.602 30 H 0.161 0.839 31 H 0.123 0.877 32 H 0.378 0.622 33 H -0.254 1.254 34 H -0.247 1.247 35 H 0.167 0.833 36 H 0.179 0.821 37 H 0.199 0.801 38 H 0.093 0.907 39 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.475 4.168 0.847 4.921 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.287 6.287 3 C 0.006 3.994 4 H 0.099 0.901 5 C -0.187 4.187 6 C 0.030 3.970 7 H 0.138 0.862 8 N -0.370 5.370 9 C 0.390 3.610 10 O -0.427 6.427 11 C -0.331 4.331 12 C 0.048 3.952 13 C -0.116 4.116 14 C -0.074 4.074 15 C -0.178 4.178 16 O -0.337 6.337 17 Si 0.598 3.402 18 C -0.178 4.178 19 C -0.005 4.005 20 N -0.031 5.031 21 N -0.133 5.133 22 C -0.061 4.061 23 C -0.211 4.211 24 H 0.062 0.938 25 H 0.062 0.938 26 H 0.107 0.893 27 H 0.104 0.896 28 H 0.116 0.884 29 H 0.232 0.768 30 H 0.179 0.821 31 H 0.140 0.860 32 H 0.226 0.774 33 H -0.179 1.179 34 H -0.171 1.171 35 H 0.184 0.816 36 H 0.197 0.803 37 H 0.215 0.785 38 H 0.111 0.889 39 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 3.152 3.087 0.799 4.484 hybrid contribution -1.480 0.327 0.343 1.554 sum 1.672 3.414 1.142 3.970 Atomic orbital electron populations 1.22851 0.80442 1.03160 1.00155 1.87902 1.20109 1.26132 1.94541 1.22855 0.94234 0.85719 0.96605 0.90109 1.23631 0.94392 1.03234 0.97401 1.22467 0.81595 0.98142 0.94836 0.86155 1.45706 1.20127 1.23990 1.47214 1.16875 0.81475 0.84373 0.78250 1.90789 1.78528 1.21991 1.51415 1.19657 1.00096 1.00706 1.12660 1.19268 0.89612 0.90002 0.96284 1.20714 0.98258 0.96884 0.95696 1.20505 0.93665 0.96628 0.96621 1.25169 1.11334 0.97093 0.84230 1.86609 1.56067 1.67978 1.23011 0.95033 0.81266 0.83557 0.80343 1.20716 1.01655 0.93379 1.02061 1.21597 0.87329 0.99987 0.91540 1.46095 1.13647 1.14517 1.28842 1.77630 1.15199 1.10037 1.10458 1.24058 0.92343 0.93643 0.96053 1.24000 0.96637 1.01855 0.98632 0.93774 0.93798 0.89309 0.89648 0.88417 0.76799 0.82136 0.85982 0.77421 1.17867 1.17067 0.81578 0.80348 0.78490 0.88901 0.90214 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.08 16 2 O -0.37 -0.80 10.63 -35.23 -0.37 -1.17 16 3 C 0.06 0.00 4.37 -25.92 -0.11 -0.12 16 4 H 0.08 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.15 0.13 7.66 -25.92 -0.20 -0.07 16 6 C 0.13 0.17 4.18 -67.11 -0.28 -0.11 16 7 H 0.12 0.48 7.46 -51.93 -0.39 0.10 16 8 N -0.72 -0.48 5.35 -54.35 -0.29 -0.77 16 9 C 0.60 2.40 7.78 -12.91 -0.10 2.30 16 10 O -0.55 -4.14 15.30 5.17 0.08 -4.06 16 11 C -0.32 -0.97 6.17 -104.68 -0.65 -1.62 16 12 C 0.17 0.57 6.76 -84.07 -0.57 0.00 16 13 C -0.10 -0.23 9.35 -39.54 -0.37 -0.60 16 14 C -0.07 0.03 4.53 -104.55 -0.47 -0.44 16 15 C -0.07 0.07 2.84 36.00 0.10 0.18 16 16 O -0.53 0.48 12.87 -35.23 -0.45 0.03 16 17 Si 0.70 -1.45 31.96 -169.99 -5.43 -6.88 16 18 C -0.16 0.49 8.38 -39.95 -0.33 0.16 16 19 C 0.12 -0.19 11.17 -16.68 -0.19 -0.38 16 20 N -0.27 -0.55 3.86 -10.55 -0.04 -0.59 16 21 N -0.31 -0.82 12.57 30.75 0.39 -0.44 16 22 C 0.12 0.11 11.44 -17.14 -0.20 -0.08 16 23 C -0.17 -0.07 7.71 -25.92 -0.20 -0.27 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 25 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.09 -0.10 8.14 -51.92 -0.42 -0.52 16 27 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.10 -0.30 8.12 -51.93 -0.42 -0.72 16 29 H 0.40 -1.01 7.65 -40.82 -0.31 -1.32 16 30 H 0.16 0.54 7.01 -52.48 -0.37 0.17 16 31 H 0.12 -0.02 7.71 -51.93 -0.40 -0.42 16 32 H 0.38 -2.15 8.09 45.56 0.37 -1.79 16 33 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 34 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 35 H 0.17 -1.29 7.31 -52.49 -0.38 -1.68 16 36 H 0.18 -0.83 8.06 -52.48 -0.42 -1.26 16 37 H 0.20 -0.68 7.46 -52.48 -0.39 -1.08 16 38 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.08 0.16 8.14 -51.93 -0.42 -0.27 16 LS Contribution 335.53 15.07 5.06 5.06 Total: 0.00 -11.44 335.53 -8.40 -19.84 By element: Atomic # 1 Polarization: -6.17 SS G_CDS: -4.86 Total: -11.03 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -2.47 Total: 0.02 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: 0.06 Total: -1.80 kcal Atomic # 8 Polarization: -4.45 SS G_CDS: -0.75 Total: -5.20 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.43 Total: -6.88 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -11.44 -8.40 -19.84 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_11618758.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.406 kcal (2) G-P(sol) polarization free energy of solvation -11.439 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.399 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.838 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.568 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds