Wall clock time and date at job start Sat Mar 6 2021 21:10:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42902 * 113.99958 * 2 1 4 4 H 1.08999 * 112.84968 * 341.20044 * 3 2 1 5 5 C 1.54051 * 113.69380 * 112.47073 * 3 2 1 6 6 C 1.53776 * 86.98539 * 139.99059 * 5 3 2 7 7 H 1.09001 * 113.61693 * 219.98084 * 6 5 3 8 8 N 1.46498 * 113.61773 * 89.16262 * 6 5 3 9 9 C 1.34777 * 120.00097 * 105.86069 * 8 6 5 10 10 O 1.21691 * 119.99922 * 0.02562 * 9 8 6 11 11 C 1.46679 * 119.99984 * 180.02562 * 9 8 6 12 12 C 1.37872 * 126.23507 * 180.33570 * 11 9 8 13 13 C 1.50701 * 126.45617 * 359.94931 * 12 11 9 14 14 C 1.39830 * 107.08525 * 180.11512 * 12 11 9 15 15 C 1.50707 * 126.06892 * 179.83519 * 14 12 11 16 16 O 1.42903 * 109.46442 * 29.71720 * 15 14 12 17 17 Si 1.86293 * 109.47256 * 149.71286 * 15 14 12 18 18 C 1.35446 * 107.86716 * 359.57655 * 14 12 11 19 19 C 1.50706 * 125.56738 * 180.24318 * 18 14 12 20 20 N 1.35533 * 108.87409 * 0.25863 * 18 14 12 21 21 C 1.53779 * 113.61505 * 210.00432 * 3 2 1 22 22 H 1.08991 * 109.47117 * 179.97438 * 1 2 3 23 23 H 1.09008 * 109.46685 * 299.99947 * 1 2 3 24 24 H 1.08995 * 109.47066 * 59.99296 * 1 2 3 25 25 H 1.08998 * 113.61426 * 25.48362 * 5 3 2 26 26 H 1.09007 * 113.69513 * 254.50784 * 5 3 2 27 27 H 0.96997 * 120.00004 * 285.86593 * 8 6 5 28 28 H 1.09005 * 109.47029 * 270.19703 * 13 12 11 29 29 H 1.08997 * 109.46991 * 30.19354 * 13 12 11 30 30 H 1.08997 * 109.47382 * 150.20054 * 13 12 11 31 31 H 1.08999 * 109.47345 * 269.71790 * 15 14 12 32 32 H 0.96700 * 114.00311 * 60.00230 * 16 15 14 33 33 H 1.48506 * 109.99973 * 180.02562 * 17 15 14 34 34 H 1.48493 * 110.00375 * 301.32185 * 17 15 14 35 35 H 1.08997 * 109.47037 * 89.99490 * 19 18 14 36 36 H 1.08992 * 109.47324 * 209.99645 * 19 18 14 37 37 H 1.09004 * 109.46520 * 329.99867 * 19 18 14 38 38 H 0.96997 * 125.68101 * 179.97438 * 20 18 14 39 39 H 1.08996 * 113.61588 * 105.38854 * 21 3 2 40 40 H 1.08999 * 113.61389 * 334.48536 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3138 2.0789 -0.3237 5 6 2.7546 1.6517 1.3035 6 6 3.8220 2.3199 0.4210 7 1 4.8425 2.1438 0.7611 8 7 3.5517 3.7321 0.1406 9 6 4.2708 4.6912 0.7567 10 8 5.1450 4.3840 1.5456 11 6 3.9998 6.1052 0.4764 12 6 4.6573 7.1855 1.0255 13 6 5.7849 7.1345 2.0240 14 6 4.0781 8.3374 0.4844 15 6 4.4711 9.7585 0.7961 16 8 5.8595 9.8061 1.1308 17 14 4.1544 10.8314 -0.6936 18 6 3.1049 7.9492 -0.3741 19 6 2.2290 8.8722 -1.1816 20 7 3.0472 6.5952 -0.3882 21 6 3.3755 1.3720 -0.7046 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3633 0.5139 0.8901 24 1 -0.3633 0.5139 -0.8899 25 1 3.1191 0.7778 1.8436 26 1 2.2161 2.3514 1.9429 27 1 2.8551 3.9770 -0.4884 28 1 5.3762 7.1416 3.0344 29 1 6.3634 6.2232 1.8725 30 1 6.4308 8.0018 1.8873 31 1 3.8817 10.1223 1.6378 32 1 6.4449 9.4962 0.4263 33 1 4.5385 12.2354 -0.3993 34 1 4.9278 10.3270 -1.8566 35 1 2.7023 9.0739 -2.1425 36 1 1.2595 8.4020 -1.3456 37 1 2.0919 9.8085 -0.6405 38 1 2.4361 6.0605 -0.9187 39 1 3.3381 1.8459 -1.6854 40 1 3.9094 0.4217 -0.7127 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_12297754.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:22 Heat of formation + Delta-G solvation = -39.793096 kcal Electronic energy + Delta-G solvation = -22463.221173 eV Core-core repulsion = 19053.421221 eV Total energy + Delta-G solvation = -3409.799951 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.71164 -41.16308 -39.50420 -37.85550 -37.34268 -34.30803 -33.67282 -32.86600 -29.35951 -28.17114 -27.39248 -26.86543 -26.39684 -24.95165 -22.75743 -20.93358 -20.73617 -20.26911 -19.42765 -17.99809 -17.56702 -16.91977 -16.77013 -16.67957 -16.42806 -16.21764 -15.80796 -15.66121 -15.09230 -14.79000 -14.36386 -14.23858 -14.09085 -14.04899 -13.78512 -13.57581 -13.56065 -13.39777 -13.24082 -13.18898 -12.48910 -12.30358 -12.26910 -12.06953 -11.77975 -11.64581 -11.05140 -10.56821 -10.46319 -10.22059 -9.51627 -9.00938 -4.82501 0.38186 1.20192 1.65459 1.66932 1.87768 1.96634 2.08174 2.34920 2.73199 3.30967 3.41142 3.42660 3.60707 3.69104 3.73802 3.78867 3.95489 4.00278 4.24775 4.28642 4.34762 4.35435 4.39512 4.59934 4.64679 4.66387 4.68636 4.70242 4.73439 4.78528 4.85524 4.90862 4.93753 5.14865 5.34798 5.40444 5.48832 5.70860 5.93151 6.13730 6.24013 6.39927 6.55042 7.13219 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.060 3.940 4 H 0.084 0.916 5 C -0.166 4.166 6 C 0.123 3.877 7 H 0.114 0.886 8 N -0.719 5.719 9 C 0.594 3.406 10 O -0.518 6.518 11 C -0.068 4.068 12 C -0.038 4.038 13 C -0.101 4.101 14 C -0.211 4.211 15 C -0.034 4.034 16 O -0.527 6.527 17 Si 0.653 3.347 18 C 0.067 3.933 19 C -0.103 4.103 20 N -0.535 5.535 21 C -0.142 4.142 22 H 0.088 0.912 23 H 0.042 0.958 24 H 0.042 0.958 25 H 0.103 0.897 26 H 0.074 0.926 27 H 0.393 0.607 28 H 0.066 0.934 29 H 0.075 0.925 30 H 0.082 0.918 31 H 0.112 0.888 32 H 0.374 0.626 33 H -0.255 1.255 34 H -0.261 1.261 35 H 0.088 0.912 36 H 0.087 0.913 37 H 0.102 0.898 38 H 0.415 0.585 39 H 0.078 0.922 40 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.752 0.601 -4.799 8.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.002 3.998 4 H 0.102 0.898 5 C -0.205 4.205 6 C 0.018 3.982 7 H 0.132 0.868 8 N -0.370 5.370 9 C 0.383 3.617 10 O -0.393 6.393 11 C -0.180 4.180 12 C -0.047 4.047 13 C -0.158 4.158 14 C -0.217 4.217 15 C -0.144 4.144 16 O -0.333 6.333 17 Si 0.554 3.446 18 C -0.051 4.051 19 C -0.159 4.159 20 N -0.133 5.133 21 C -0.180 4.180 22 H 0.106 0.894 23 H 0.061 0.939 24 H 0.060 0.940 25 H 0.121 0.879 26 H 0.092 0.908 27 H 0.226 0.774 28 H 0.085 0.915 29 H 0.094 0.906 30 H 0.100 0.900 31 H 0.130 0.870 32 H 0.222 0.778 33 H -0.180 1.180 34 H -0.185 1.185 35 H 0.106 0.894 36 H 0.106 0.894 37 H 0.120 0.880 38 H 0.252 0.748 39 H 0.096 0.904 40 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -5.954 0.815 -4.334 7.409 hybrid contribution 0.048 -0.557 -0.548 0.783 sum -5.906 0.259 -4.882 7.667 Atomic orbital electron populations 1.22824 0.80860 1.03152 0.99949 1.87966 1.19894 1.26939 1.94527 1.23869 0.93727 0.85508 0.96700 0.89844 1.24031 0.97698 1.01362 0.97390 1.21632 1.00689 0.79214 0.96690 0.86802 1.45578 1.39007 1.05750 1.46674 1.16999 0.81253 0.83076 0.80375 1.90852 1.31854 1.81914 1.34659 1.20075 1.00328 0.92991 1.04566 1.19808 0.97579 0.89565 0.97736 1.20572 0.95338 1.03638 0.96214 1.19557 1.02139 0.95970 1.04073 1.24253 0.84331 0.95969 1.09884 1.86555 1.15444 1.87610 1.43737 0.95580 0.93547 0.78830 0.76642 1.20158 1.00580 0.83068 1.01338 1.20422 0.98597 0.97247 0.99625 1.41734 1.29873 1.06265 1.35384 1.23620 0.95824 1.00587 0.97968 0.89383 0.93917 0.93981 0.87902 0.90763 0.77392 0.91500 0.90594 0.89976 0.86989 0.77773 1.17975 1.18524 0.89363 0.89439 0.87991 0.74751 0.90369 0.87340 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.41 10.72 -35.23 -0.38 -0.79 16 3 C 0.06 -0.06 4.20 -25.78 -0.11 -0.17 16 4 H 0.08 -0.23 7.87 -51.93 -0.41 -0.64 16 5 C -0.17 0.04 7.73 -25.78 -0.20 -0.16 16 6 C 0.12 -0.04 4.30 -67.12 -0.29 -0.33 16 7 H 0.11 0.15 7.50 -51.93 -0.39 -0.24 16 8 N -0.72 0.59 5.26 -54.33 -0.29 0.30 16 9 C 0.59 1.50 7.79 -12.85 -0.10 1.40 16 10 O -0.52 -3.20 14.43 5.20 0.07 -3.13 16 11 C -0.07 -0.11 7.06 -81.98 -0.58 -0.69 16 12 C -0.04 -0.11 6.15 -104.16 -0.64 -0.75 16 13 C -0.10 -0.34 9.50 36.01 0.34 0.00 16 14 C -0.21 -0.18 5.38 -105.02 -0.57 -0.74 16 15 C -0.03 -0.01 3.03 36.01 0.11 0.10 16 16 O -0.53 -0.97 10.19 -35.23 -0.36 -1.33 16 17 Si 0.65 -0.66 26.76 -169.99 -4.55 -5.21 16 18 C 0.07 -0.11 6.84 -81.95 -0.56 -0.67 16 19 C -0.10 0.54 8.21 36.01 0.30 0.83 16 20 N -0.54 1.03 5.99 -5.69 -0.03 0.99 16 21 C -0.14 0.22 7.65 -25.92 -0.20 0.02 16 22 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 23 H 0.04 -0.08 8.14 -51.92 -0.42 -0.50 16 24 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 25 H 0.10 0.03 8.14 -51.93 -0.42 -0.40 16 26 H 0.07 0.02 8.14 -51.92 -0.42 -0.41 16 27 H 0.39 -1.49 7.83 -40.82 -0.32 -1.81 16 28 H 0.07 0.26 8.14 -51.93 -0.42 -0.17 16 29 H 0.08 0.35 6.50 -51.93 -0.34 0.02 16 30 H 0.08 0.21 5.46 -51.93 -0.28 -0.07 16 31 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 32 H 0.37 -0.17 8.47 45.56 0.39 0.22 16 33 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 34 H -0.26 -0.40 7.11 56.52 0.40 0.01 16 35 H 0.09 -0.50 7.13 -51.93 -0.37 -0.87 16 36 H 0.09 -0.62 8.14 -51.93 -0.42 -1.04 16 37 H 0.10 -0.65 5.18 -51.93 -0.27 -0.92 16 38 H 0.41 -2.21 8.19 -40.82 -0.33 -2.55 16 39 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 40 H 0.11 -0.12 8.14 -51.93 -0.42 -0.55 16 LS Contribution 321.62 15.07 4.85 4.85 Total: 0.00 -8.89 321.62 -7.82 -16.72 By element: Atomic # 1 Polarization: -6.57 SS G_CDS: -5.74 Total: -12.31 kcal Atomic # 6 Polarization: 1.31 SS G_CDS: -1.40 Total: -0.08 kcal Atomic # 7 Polarization: 1.61 SS G_CDS: -0.32 Total: 1.29 kcal Atomic # 8 Polarization: -4.59 SS G_CDS: -0.66 Total: -5.25 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -4.55 Total: -5.21 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -8.89 -7.82 -16.72 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_12297754.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.078 kcal (2) G-P(sol) polarization free energy of solvation -8.893 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.972 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.715 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds