Wall clock time and date at job start Sat Mar 6 2021 21:10:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42894 * 114.00393 * 2 1 4 4 H 1.09002 * 112.90574 * 341.24841 * 3 2 1 5 5 C 1.53779 * 113.61588 * 112.50113 * 3 2 1 6 6 C 1.53779 * 87.08402 * 139.98302 * 5 3 2 7 7 H 1.08997 * 113.61646 * 220.02209 * 6 5 3 8 8 N 1.46497 * 113.69123 * 89.12592 * 6 5 3 9 9 C 1.34780 * 119.99769 * 107.46801 * 8 6 5 10 10 O 1.21568 * 119.99877 * 0.02562 * 9 8 6 11 11 C 1.47694 * 119.99674 * 179.97438 * 9 8 6 12 12 C 1.39818 * 120.16601 * 180.02562 * 11 9 8 13 13 F 1.35104 * 120.10908 * 0.02562 * 12 11 9 14 14 C 1.38323 * 119.78234 * 180.02562 * 12 11 9 15 15 C 1.38195 * 120.11434 * 359.97425 * 14 12 11 16 16 C 1.38461 * 120.34248 * 0.02796 * 15 14 12 17 17 C 1.50703 * 119.89265 * 180.02562 * 16 15 14 18 18 O 1.42891 * 109.47189 * 119.99587 * 17 16 15 19 19 Si 1.86299 * 109.47073 * 359.97438 * 17 16 15 20 20 C 1.37857 * 120.21618 * 359.71091 * 16 15 14 21 21 C 1.53784 * 113.61434 * 209.99830 * 3 2 1 22 22 H 1.08995 * 109.47463 * 179.97438 * 1 2 3 23 23 H 1.08994 * 109.46959 * 300.00297 * 1 2 3 24 24 H 1.09007 * 109.46503 * 60.00032 * 1 2 3 25 25 H 1.09006 * 113.61307 * 25.43504 * 5 3 2 26 26 H 1.09007 * 113.61642 * 254.53261 * 5 3 2 27 27 H 0.96998 * 120.00318 * 287.46338 * 8 6 5 28 28 H 1.08001 * 119.93851 * 180.02562 * 14 12 11 29 29 H 1.08002 * 119.82641 * 180.02562 * 15 14 12 30 30 H 1.08998 * 109.47025 * 240.00141 * 17 16 15 31 31 H 0.96708 * 114.00060 * 180.02562 * 18 17 16 32 32 H 1.48498 * 110.00036 * 298.68390 * 19 17 16 33 33 H 1.48501 * 109.99822 * 60.00120 * 19 17 16 34 34 H 1.08001 * 120.06079 * 180.28022 * 20 16 15 35 35 H 1.09004 * 113.61451 * 105.47160 * 21 3 2 36 36 H 1.08994 * 113.61477 * 334.56462 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3144 2.0797 -0.3228 5 6 2.7535 1.6488 1.3017 6 6 3.8228 2.3180 0.4223 7 1 4.8427 2.1397 0.7631 8 7 3.5552 3.7309 0.1428 9 6 4.2960 4.6874 0.7369 10 8 5.1865 4.3776 1.5042 11 6 4.0266 6.1119 0.4547 12 6 4.7932 7.1070 1.0686 13 9 5.7843 6.7691 1.9223 14 6 4.5336 8.4387 0.7990 15 6 3.5203 8.7845 -0.0747 16 6 2.7580 7.8031 -0.6854 17 6 1.6558 8.1916 -1.6369 18 8 1.9182 7.6303 -2.9244 19 14 1.5781 10.0480 -1.7723 20 6 3.0082 6.4715 -0.4308 21 6 3.3757 1.3717 -0.7045 22 1 -0.3634 -1.0276 -0.0005 23 1 -0.3633 0.5139 0.8899 24 1 -0.3632 0.5139 -0.8901 25 1 3.1167 0.7738 1.8410 26 1 2.2141 2.3476 1.9412 27 1 2.8450 3.9781 -0.4698 28 1 5.1245 9.2094 1.2714 29 1 3.3219 9.8256 -0.2822 30 1 0.7037 7.8148 -1.2633 31 1 1.2479 7.8404 -3.5892 32 1 1.2740 10.6418 -0.4456 33 1 2.8703 10.5747 -2.2803 34 1 2.4150 5.7080 -0.9120 35 1 3.3386 1.8469 -1.6848 36 1 3.9089 0.4211 -0.7137 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_12335834.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:27 Heat of formation + Delta-G solvation = -89.762416 kcal Electronic energy + Delta-G solvation = -22052.112866 eV Core-core repulsion = 18418.967115 eV Total energy + Delta-G solvation = -3633.145751 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.110 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -49.88678 -41.61808 -40.58069 -39.45859 -37.68116 -37.28224 -34.35277 -32.68130 -32.29991 -27.93304 -26.83553 -26.74683 -26.01494 -24.83023 -23.16379 -21.66543 -20.67212 -19.17797 -18.74357 -18.45793 -17.78523 -17.76599 -16.83719 -16.77588 -16.59477 -16.39672 -16.17263 -15.82459 -15.63270 -15.57751 -14.87041 -14.49797 -14.20542 -14.17326 -13.95605 -13.68804 -13.58744 -13.42814 -13.32450 -12.65346 -12.58724 -12.25758 -12.12233 -12.02907 -11.59039 -11.04985 -10.58409 -10.52193 -10.47061 -10.15171 -9.85467 -5.14860 -0.57638 -0.14894 1.06892 1.46174 1.60090 1.77777 1.87974 2.40833 2.77888 2.96259 3.05506 3.29350 3.34638 3.44098 3.47278 3.54896 3.76523 3.78902 3.84239 3.96845 4.10829 4.28981 4.36664 4.39866 4.41117 4.59429 4.65197 4.69713 4.70891 4.76261 4.78224 4.83845 4.89910 4.95418 4.99845 5.41369 5.47702 6.18405 6.30538 6.39420 7.07671 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.060 3.940 4 H 0.086 0.914 5 C -0.166 4.166 6 C 0.121 3.879 7 H 0.114 0.886 8 N -0.709 5.709 9 C 0.564 3.436 10 O -0.515 6.515 11 C -0.174 4.174 12 C 0.168 3.832 13 F -0.109 7.109 14 C -0.154 4.154 15 C -0.067 4.067 16 C -0.095 4.095 17 C -0.071 4.071 18 O -0.545 6.545 19 Si 0.683 3.317 20 C -0.027 4.027 21 C -0.142 4.142 22 H 0.087 0.913 23 H 0.042 0.958 24 H 0.042 0.958 25 H 0.103 0.897 26 H 0.074 0.926 27 H 0.400 0.600 28 H 0.150 0.850 29 H 0.133 0.867 30 H 0.080 0.920 31 H 0.386 0.614 32 H -0.252 1.252 33 H -0.248 1.248 34 H 0.140 0.860 35 H 0.080 0.920 36 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.582 2.868 -4.647 9.344 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.002 3.998 4 H 0.104 0.896 5 C -0.205 4.205 6 C 0.015 3.985 7 H 0.132 0.868 8 N -0.362 5.362 9 C 0.350 3.650 10 O -0.391 6.391 11 C -0.178 4.178 12 C 0.147 3.853 13 F -0.087 7.087 14 C -0.173 4.173 15 C -0.084 4.084 16 C -0.095 4.095 17 C -0.182 4.182 18 O -0.352 6.352 19 Si 0.584 3.416 20 C -0.046 4.046 21 C -0.180 4.180 22 H 0.106 0.894 23 H 0.061 0.939 24 H 0.061 0.939 25 H 0.121 0.879 26 H 0.092 0.908 27 H 0.236 0.764 28 H 0.168 0.832 29 H 0.151 0.849 30 H 0.098 0.902 31 H 0.234 0.766 32 H -0.177 1.177 33 H -0.172 1.172 34 H 0.158 0.842 35 H 0.099 0.901 36 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -5.907 2.983 -3.469 7.471 hybrid contribution -0.354 -0.120 0.140 0.399 sum -6.261 2.862 -3.328 7.646 Atomic orbital electron populations 1.22823 0.80884 1.03109 0.99980 1.87962 1.19885 1.26954 1.94533 1.23825 0.93803 0.85562 0.96614 0.89650 1.23992 0.97673 1.01359 0.97479 1.21667 1.00769 0.79152 0.96885 0.86777 1.45549 1.37195 1.05512 1.47911 1.17921 0.81770 0.84730 0.80541 1.90878 1.30756 1.82757 1.34693 1.20051 1.00881 0.93356 1.03479 1.17694 0.86196 0.92246 0.89126 1.91637 1.57554 1.92982 1.66517 1.21113 1.00289 0.94692 1.01209 1.20953 0.93489 0.98996 0.94997 1.19311 0.98148 0.93281 0.98792 1.24634 0.97418 1.11082 0.85025 1.86476 1.52423 1.77249 1.19068 0.95029 0.86441 0.74646 0.85465 1.20984 0.94254 0.96196 0.93174 1.23630 0.95751 1.00520 0.98099 0.89428 0.93942 0.93915 0.87871 0.90760 0.76418 0.83194 0.84934 0.90243 0.76605 1.17684 1.17210 0.84210 0.90147 0.87337 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.54 10.71 -35.23 -0.38 -0.92 16 3 C 0.06 -0.03 4.19 -25.92 -0.11 -0.14 16 4 H 0.09 -0.19 7.87 -51.93 -0.41 -0.60 16 5 C -0.17 -0.04 7.71 -25.92 -0.20 -0.24 16 6 C 0.12 0.06 4.32 -67.12 -0.29 -0.23 16 7 H 0.11 0.24 7.46 -51.93 -0.39 -0.15 16 8 N -0.71 -0.20 5.22 -54.01 -0.28 -0.48 16 9 C 0.56 2.03 7.77 -12.40 -0.10 1.94 16 10 O -0.52 -3.93 14.94 5.31 0.08 -3.85 16 11 C -0.17 -0.41 5.88 -104.91 -0.62 -1.03 16 12 C 0.17 0.55 7.29 -38.96 -0.28 0.27 16 13 F -0.11 -0.62 15.55 2.25 0.04 -0.59 16 14 C -0.15 -0.16 10.01 -39.57 -0.40 -0.56 16 15 C -0.07 -0.02 8.66 -39.52 -0.34 -0.37 16 16 C -0.09 0.00 5.42 -104.68 -0.57 -0.56 16 17 C -0.07 0.19 2.81 36.01 0.10 0.29 16 18 O -0.55 1.34 12.73 -35.23 -0.45 0.89 16 19 Si 0.68 -2.12 29.78 -169.99 -5.06 -7.18 16 20 C -0.03 0.00 9.09 -39.19 -0.36 -0.35 16 21 C -0.14 0.13 7.66 -25.91 -0.20 -0.07 16 22 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 23 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.04 -0.09 8.14 -51.92 -0.42 -0.51 16 25 H 0.10 0.06 8.14 -51.93 -0.42 -0.36 16 26 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 27 H 0.40 -0.99 6.74 -40.82 -0.27 -1.26 16 28 H 0.15 -0.15 8.06 -52.49 -0.42 -0.57 16 29 H 0.13 -0.10 4.86 -52.49 -0.25 -0.36 16 30 H 0.08 -0.36 7.96 -51.93 -0.41 -0.77 16 31 H 0.39 -2.78 8.74 45.56 0.40 -2.39 16 32 H -0.25 0.19 7.11 56.52 0.40 0.59 16 33 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 34 H 0.14 -0.37 6.41 -52.49 -0.34 -0.71 16 35 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.11 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 309.89 15.07 4.67 4.67 Total: 0.00 -8.78 309.89 -7.90 -16.68 By element: Atomic # 1 Polarization: -4.97 SS G_CDS: -4.26 Total: -9.23 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -2.26 Total: 0.01 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -0.28 Total: -0.48 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.75 Total: -3.89 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.04 Total: -0.59 kcal Atomic # 14 Polarization: -2.12 SS G_CDS: -5.06 Total: -7.18 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -8.78 -7.90 -16.68 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_12335834.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.079 kcal (2) G-P(sol) polarization free energy of solvation -8.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.901 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.684 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.762 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds