Wall clock time and date at job start Sat Mar 6 2021 21:10:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42899 * 113.99778 * 2 1 4 4 H 1.09000 * 112.85502 * 20.33210 * 3 2 1 5 5 C 1.53784 * 113.61403 * 151.52904 * 3 2 1 6 6 C 1.53777 * 87.08125 * 139.97892 * 5 3 2 7 7 H 1.09001 * 113.61109 * 220.01833 * 6 5 3 8 8 N 1.46505 * 113.61411 * 89.11476 * 6 5 3 9 9 C 1.34780 * 119.99733 * 154.99853 * 8 6 5 10 10 O 1.21553 * 119.99857 * 0.02562 * 9 8 6 11 11 C 1.47856 * 119.99824 * 180.02562 * 9 8 6 12 12 C 1.39578 * 120.11313 * 359.73005 * 11 9 8 13 13 C 1.38019 * 119.98431 * 179.70280 * 12 11 9 14 14 C 1.38217 * 120.21486 * 0.58749 * 13 12 11 15 15 C 1.38950 * 120.23012 * 359.68497 * 14 13 12 16 16 N 1.40229 * 119.99634 * 180.02562 * 15 14 13 17 17 C 1.36563 * 125.66910 * 245.00550 * 16 15 14 18 18 C 1.50699 * 125.90231 * 359.97438 * 17 16 15 19 19 C 1.34853 * 108.19710 * 179.97438 * 17 16 15 20 20 C 1.40941 * 107.47008 * 359.97438 * 19 17 16 21 21 C 1.50696 * 126.26561 * 179.97438 * 20 19 17 22 22 O 1.42906 * 109.47325 * 255.02788 * 21 20 19 23 23 Si 1.86304 * 109.47185 * 15.02852 * 21 20 19 24 24 C 1.34849 * 107.46591 * 359.77722 * 20 19 17 25 25 C 1.50703 * 125.90138 * 180.22219 * 24 20 19 26 26 C 1.38543 * 120.01314 * 0.02562 * 15 14 13 27 27 C 1.53783 * 113.61362 * 249.13580 * 3 2 1 28 28 H 1.09001 * 109.46558 * 60.00281 * 1 2 3 29 29 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47187 * 300.00233 * 1 2 3 31 31 H 1.09000 * 113.61138 * 254.52915 * 5 3 2 32 32 H 1.08998 * 113.61384 * 25.34302 * 5 3 2 33 33 H 0.96995 * 119.99809 * 335.00316 * 8 6 5 34 34 H 1.08003 * 120.00626 * 359.96656 * 12 11 9 35 35 H 1.08000 * 119.89195 * 180.27440 * 13 12 11 36 36 H 1.08005 * 119.88739 * 179.70422 * 14 13 12 37 37 H 1.08991 * 109.47091 * 89.99740 * 18 17 16 38 38 H 1.09000 * 109.47127 * 210.00112 * 18 17 16 39 39 H 1.09000 * 109.46910 * 329.99791 * 18 17 16 40 40 H 1.08003 * 126.26425 * 179.97438 * 19 17 16 41 41 H 1.09002 * 109.47247 * 135.02707 * 21 20 19 42 42 H 0.96702 * 113.99334 * 60.00221 * 22 21 20 43 43 H 1.48503 * 110.00020 * 179.97438 * 23 21 20 44 44 H 1.48498 * 110.00068 * 301.31534 * 23 21 20 45 45 H 1.08992 * 109.46625 * 270.16946 * 25 24 20 46 46 H 1.09007 * 109.46595 * 30.16217 * 25 24 20 47 47 H 1.08990 * 109.47085 * 150.16190 * 25 24 20 48 48 H 1.07993 * 120.11140 * 179.97438 * 26 15 14 49 49 H 1.09003 * 113.61151 * 334.56636 * 27 3 2 50 50 H 1.08993 * 113.61672 * 105.47092 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3220 2.0753 0.3490 5 6 3.3923 1.3645 0.6717 6 6 3.8120 2.3229 -0.4552 7 1 4.8233 2.1485 -0.8227 8 7 3.5496 3.7326 -0.1549 9 6 4.2752 4.6961 -0.7562 10 8 5.1471 4.3955 -1.5480 11 6 4.0108 6.1188 -0.4526 12 6 3.0064 6.4669 0.4520 13 6 2.7659 7.7955 0.7380 14 6 3.5087 8.7851 0.1222 15 6 4.5069 8.4490 -0.7841 16 7 5.2579 9.4570 -1.4056 17 6 5.2595 9.7397 -2.7417 18 6 4.4572 9.0237 -3.7974 19 6 6.1031 10.7704 -2.9530 20 6 6.6421 11.1390 -1.7039 21 6 7.6339 12.2453 -1.4525 22 8 8.9243 11.6818 -1.2085 23 14 7.7143 13.3582 -2.9445 24 6 6.1044 10.3232 -0.7745 25 6 6.3910 10.3586 0.7046 26 6 4.7604 7.1181 -1.0737 27 6 2.7192 1.6641 -1.3167 28 1 -0.3632 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5139 0.8900 31 1 3.3791 1.8290 1.6577 32 1 3.9249 0.4136 0.6590 33 1 2.8536 3.9725 0.4767 34 1 2.4204 5.6965 0.9312 35 1 1.9913 8.0630 1.4415 36 1 3.3128 9.8233 0.3463 37 1 3.4901 9.5128 -3.9128 38 1 4.9950 9.0538 -4.7451 39 1 4.3065 7.9865 -3.4980 40 1 6.3250 11.2295 -3.9051 41 1 7.3201 12.8242 -0.5839 42 1 9.2672 11.1523 -1.9414 43 1 8.6887 14.4538 -2.7089 44 1 8.1104 12.5744 -4.1420 45 1 7.2358 9.7067 0.9266 46 1 6.6311 11.3790 1.0037 47 1 5.5137 10.0161 1.2530 48 1 5.5356 6.8551 -1.7781 49 1 3.0681 0.7956 -1.8753 50 1 2.1635 2.3702 -1.9336 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_12335854.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:38 Heat of formation + Delta-G solvation = 1.467913 kcal Electronic energy + Delta-G solvation = -31452.239752 eV Core-core repulsion = 27220.249212 eV Total energy + Delta-G solvation = -4231.990540 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -42.92730 -41.66955 -40.34481 -39.25738 -37.83789 -37.35144 -34.81185 -33.84977 -33.71693 -32.26815 -30.45027 -30.17263 -27.84965 -27.25109 -26.82038 -25.94888 -24.83126 -24.40518 -23.68878 -22.16749 -21.09224 -20.75064 -20.42592 -18.82487 -18.06676 -17.62105 -17.40886 -17.35526 -17.18128 -16.67843 -16.56221 -16.29776 -15.99804 -15.91266 -15.57571 -15.46295 -15.05121 -14.99471 -14.69211 -14.36475 -14.18344 -14.15022 -14.07119 -13.79377 -13.60294 -13.51978 -13.47416 -13.35686 -13.29359 -13.20897 -12.95721 -12.68593 -12.47304 -12.20447 -12.18581 -11.98909 -11.71341 -11.57538 -11.29879 -10.53442 -10.49997 -10.44370 -10.34233 -10.13537 -9.54591 -8.86487 -4.85821 -0.46568 -0.06711 1.06302 1.41919 1.58024 1.62145 1.71120 1.75795 1.91883 2.02952 2.54752 2.85692 3.38065 3.40522 3.49698 3.55008 3.65309 3.66144 3.78203 3.86268 3.90661 3.92936 3.95729 4.09673 4.17249 4.30812 4.34287 4.38772 4.43908 4.47470 4.54927 4.57094 4.60854 4.66422 4.69290 4.70903 4.71465 4.73832 4.83349 4.88229 4.91277 4.95012 4.97370 4.98760 5.00978 5.05490 5.12504 5.15607 5.33295 5.36819 5.53204 5.95275 6.12035 6.26226 6.31199 6.44041 6.54872 6.98853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.401 6.401 3 C 0.063 3.937 4 H 0.110 0.890 5 C -0.133 4.133 6 C 0.117 3.883 7 H 0.090 0.910 8 N -0.690 5.690 9 C 0.561 3.439 10 O -0.578 6.578 11 C -0.133 4.133 12 C -0.065 4.065 13 C -0.098 4.098 14 C -0.082 4.082 15 C 0.098 3.902 16 N -0.405 5.405 17 C 0.015 3.985 18 C -0.085 4.085 19 C -0.199 4.199 20 C -0.202 4.202 21 C -0.046 4.046 22 O -0.552 6.552 23 Si 0.775 3.225 24 C 0.041 3.959 25 C -0.082 4.082 26 C -0.068 4.068 27 C -0.168 4.168 28 H 0.047 0.953 29 H 0.089 0.911 30 H 0.057 0.943 31 H 0.098 0.902 32 H 0.101 0.899 33 H 0.418 0.582 34 H 0.170 0.830 35 H 0.178 0.822 36 H 0.148 0.852 37 H 0.085 0.915 38 H 0.089 0.911 39 H 0.055 0.945 40 H 0.150 0.850 41 H 0.118 0.882 42 H 0.381 0.619 43 H -0.304 1.304 44 H -0.291 1.291 45 H 0.063 0.937 46 H 0.091 0.909 47 H 0.075 0.925 48 H 0.113 0.887 49 H 0.091 0.909 50 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.167 0.444 4.944 11.314 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.320 6.320 3 C 0.005 3.995 4 H 0.128 0.872 5 C -0.171 4.171 6 C 0.011 3.989 7 H 0.109 0.891 8 N -0.342 5.342 9 C 0.349 3.651 10 O -0.458 6.458 11 C -0.137 4.137 12 C -0.083 4.083 13 C -0.116 4.116 14 C -0.102 4.102 15 C 0.008 3.992 16 N -0.080 5.080 17 C -0.094 4.094 18 C -0.142 4.142 19 C -0.222 4.222 20 C -0.208 4.208 21 C -0.155 4.155 22 O -0.360 6.360 23 Si 0.681 3.319 24 C -0.069 4.069 25 C -0.139 4.139 26 C -0.088 4.088 27 C -0.207 4.207 28 H 0.065 0.935 29 H 0.108 0.892 30 H 0.075 0.925 31 H 0.117 0.883 32 H 0.120 0.880 33 H 0.257 0.743 34 H 0.187 0.813 35 H 0.195 0.805 36 H 0.166 0.834 37 H 0.103 0.897 38 H 0.108 0.892 39 H 0.074 0.926 40 H 0.168 0.832 41 H 0.136 0.864 42 H 0.230 0.770 43 H -0.232 1.232 44 H -0.218 1.218 45 H 0.082 0.918 46 H 0.109 0.891 47 H 0.094 0.906 48 H 0.131 0.869 49 H 0.110 0.890 50 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -9.216 0.430 4.467 10.250 hybrid contribution 0.853 -0.818 -0.333 1.228 sum -8.363 -0.388 4.134 9.337 Atomic orbital electron populations 1.22959 0.79784 1.03662 1.00897 1.87933 1.21255 1.28168 1.94628 1.23935 0.94259 0.85566 0.95731 0.87201 1.23545 0.95256 0.99776 0.98487 1.21643 0.99587 0.79794 0.97829 0.89150 1.45403 1.38278 1.04828 1.45740 1.18471 0.80674 0.86079 0.79849 1.90803 1.34355 1.83985 1.36682 1.19677 1.00508 0.91531 1.01967 1.21796 0.94240 0.98444 0.93828 1.21474 0.99633 0.91062 0.99453 1.21696 0.92079 1.02169 0.94211 1.17676 0.95721 0.86543 0.99213 1.41498 1.34511 1.25550 1.06467 1.20738 1.04181 1.00895 0.83541 1.20388 0.99546 0.98673 0.95593 1.20791 1.02516 1.00689 0.98248 1.19677 1.05156 1.02829 0.93142 1.24469 0.81291 0.97868 1.11902 1.86533 1.33453 1.70497 1.45491 0.93900 0.87517 0.76863 0.73613 1.20582 0.96315 0.93891 0.96109 1.20361 1.02006 1.04062 0.87503 1.21097 0.98199 0.91057 0.98428 1.24001 0.97796 1.00917 0.98014 0.93477 0.89247 0.92474 0.88311 0.88023 0.74322 0.81314 0.80459 0.83427 0.89663 0.89193 0.92597 0.83240 0.86418 0.77040 1.23191 1.21756 0.91828 0.89076 0.90620 0.86885 0.89047 0.90911 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 10.85 113.37 1.23 1.14 16 2 O -0.40 -0.47 10.71 -148.98 -1.60 -2.06 16 3 C 0.06 -0.23 4.17 31.12 0.13 -0.10 16 4 H 0.11 -0.97 7.88 -2.39 -0.02 -0.99 16 5 C -0.13 0.57 7.66 31.12 0.24 0.80 16 6 C 0.12 -0.10 4.33 45.58 0.20 0.10 16 7 H 0.09 0.39 7.47 -2.39 -0.02 0.37 16 8 N -0.69 2.22 5.21 -442.60 -2.31 -0.09 16 9 C 0.56 2.31 7.77 86.79 0.67 2.98 16 10 O -0.58 -8.19 15.95 -3.88 -0.06 -8.25 16 11 C -0.13 -0.03 5.87 -20.10 -0.12 -0.15 16 12 C -0.06 0.52 9.54 22.54 0.21 0.74 16 13 C -0.10 0.90 10.02 22.21 0.22 1.12 16 14 C -0.08 0.33 8.74 22.44 0.20 0.53 16 15 C 0.10 0.20 5.02 38.04 0.19 0.39 16 16 N -0.41 -1.99 2.79 -320.36 -0.89 -2.88 16 17 C 0.01 0.08 6.81 41.04 0.28 0.36 16 18 C -0.08 -0.12 10.08 71.24 0.72 0.60 16 19 C -0.20 -1.01 9.27 22.15 0.21 -0.80 16 20 C -0.20 -1.04 5.35 -19.98 -0.11 -1.15 16 21 C -0.05 -0.16 2.61 71.23 0.19 0.03 16 22 O -0.55 -3.77 12.88 -148.98 -1.92 -5.69 16 23 Si 0.77 1.56 30.86 68.60 2.12 3.67 16 24 C 0.04 0.21 6.81 41.04 0.28 0.49 16 25 C -0.08 -0.10 9.87 71.24 0.70 0.60 16 26 C -0.07 -0.30 8.32 22.65 0.19 -0.11 16 27 C -0.17 0.16 7.72 31.18 0.24 0.40 16 28 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 29 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 30 H 0.06 -0.40 8.14 -2.39 -0.02 -0.42 16 31 H 0.10 -0.78 8.14 -2.39 -0.02 -0.79 16 32 H 0.10 -0.26 8.14 -2.39 -0.02 -0.28 16 33 H 0.42 -4.54 6.73 -92.71 -0.62 -5.17 16 34 H 0.17 -2.68 6.40 -2.91 -0.02 -2.70 16 35 H 0.18 -2.81 8.06 -2.91 -0.02 -2.84 16 36 H 0.15 -0.92 8.06 -2.91 -0.02 -0.94 16 37 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 38 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 39 H 0.06 0.17 6.85 -2.39 -0.02 0.16 16 40 H 0.15 0.40 6.52 -2.91 -0.02 0.38 16 41 H 0.12 0.13 7.49 -2.39 -0.02 0.11 16 42 H 0.38 1.01 8.70 -74.06 -0.64 0.36 16 43 H -0.30 -2.66 7.11 99.48 0.71 -1.95 16 44 H -0.29 -1.92 7.01 99.48 0.70 -1.23 16 45 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 46 H 0.09 -0.05 7.50 -2.38 -0.02 -0.06 16 47 H 0.07 -0.14 6.83 -2.39 -0.02 -0.16 16 48 H 0.11 1.12 7.65 -2.91 -0.02 1.10 16 49 H 0.09 0.12 8.14 -2.39 -0.02 0.10 16 50 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 Total: 0.00 -23.99 410.89 0.94 -23.05 By element: Atomic # 1 Polarization: -15.43 SS G_CDS: -0.27 Total: -15.70 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: 5.87 Total: 7.95 kcal Atomic # 7 Polarization: 0.23 SS G_CDS: -3.20 Total: -2.97 kcal Atomic # 8 Polarization: -12.42 SS G_CDS: -3.58 Total: -16.00 kcal Atomic # 14 Polarization: 1.56 SS G_CDS: 2.12 Total: 3.67 kcal Total: -23.99 0.94 -23.05 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_12335854.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.515 kcal (2) G-P(sol) polarization free energy of solvation -23.987 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.940 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.047 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.468 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds