Wall clock time and date at job start Sat Mar 6 2021 21:10:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42894 * 113.99998 * 2 1 4 4 H 1.09002 * 112.85001 * 341.19978 * 3 2 1 5 5 C 1.53784 * 113.61609 * 112.50401 * 3 2 1 6 6 C 1.53775 * 87.08239 * 139.98327 * 5 3 2 7 7 H 1.08999 * 113.69036 * 220.00469 * 6 5 3 8 8 N 1.46502 * 113.61368 * 89.11823 * 6 5 3 9 9 C 1.34784 * 119.99777 * 107.50129 * 8 6 5 10 10 O 1.21281 * 119.99945 * 0.02562 * 9 8 6 11 11 C 1.50699 * 119.99631 * 180.02562 * 9 8 6 12 12 C 1.50701 * 109.46907 * 179.97438 * 11 9 8 13 13 C 1.38285 * 119.93186 * 89.99911 * 12 11 9 14 14 C 1.38124 * 120.05945 * 179.97438 * 13 12 11 15 15 C 1.38825 * 119.93789 * 0.02562 * 14 13 12 16 16 N 1.40200 * 120.06347 * 180.02562 * 15 14 13 17 17 C 1.36566 * 125.66989 * 114.67166 * 16 15 14 18 18 C 1.50701 * 125.89848 * 359.97438 * 17 16 15 19 19 C 1.34846 * 108.20070 * 179.82959 * 17 16 15 20 20 C 1.40948 * 107.46960 * 0.42161 * 19 17 16 21 21 C 1.50694 * 126.26719 * 179.76046 * 20 19 17 22 22 O 1.42903 * 109.46869 * 254.97403 * 21 20 19 23 23 Si 1.86296 * 109.47452 * 14.97375 * 21 20 19 24 24 C 1.34852 * 107.46418 * 359.73506 * 20 19 17 25 25 C 1.50698 * 125.89864 * 179.97438 * 24 20 19 26 26 C 1.38821 * 119.86756 * 359.97438 * 15 14 13 27 27 C 1.38123 * 119.93414 * 0.02562 * 26 15 14 28 28 C 1.53774 * 87.08359 * 334.56875 * 6 5 3 29 29 H 1.08992 * 109.47382 * 299.99369 * 1 2 3 30 30 H 1.08994 * 109.47046 * 60.00188 * 1 2 3 31 31 H 1.09009 * 109.46823 * 179.97438 * 1 2 3 32 32 H 1.09004 * 113.61328 * 25.43330 * 5 3 2 33 33 H 1.09000 * 113.61702 * 254.53489 * 5 3 2 34 34 H 0.96997 * 120.00213 * 287.50290 * 8 6 5 35 35 H 1.08996 * 109.47574 * 60.00143 * 11 9 8 36 36 H 1.09000 * 109.47444 * 299.99849 * 11 9 8 37 37 H 1.07992 * 119.96569 * 359.70426 * 13 12 11 38 38 H 1.08003 * 120.02653 * 180.02562 * 14 13 12 39 39 H 1.09003 * 109.46981 * 90.00064 * 18 17 16 40 40 H 1.08999 * 109.47317 * 210.00094 * 18 17 16 41 41 H 1.08995 * 109.47106 * 330.00139 * 18 17 16 42 42 H 1.08002 * 126.26900 * 180.16351 * 19 17 16 43 43 H 1.08999 * 109.47327 * 134.97635 * 21 20 19 44 44 H 0.96701 * 113.99709 * 179.97438 * 22 21 20 45 45 H 1.48500 * 110.00292 * 178.68283 * 23 21 20 46 46 H 1.48505 * 110.00147 * 300.00088 * 23 21 20 47 47 H 1.08997 * 109.47586 * 270.04869 * 25 24 20 48 48 H 1.08999 * 109.46918 * 30.04851 * 25 24 20 49 49 H 1.09003 * 109.46905 * 150.04443 * 25 24 20 50 50 H 1.08001 * 120.03029 * 179.97438 * 26 15 14 51 51 H 1.08008 * 119.96250 * 179.97438 * 27 26 15 52 52 H 1.08998 * 113.61583 * 139.97996 * 28 6 5 53 53 H 1.09000 * 113.61455 * 270.80405 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0788 -0.3237 5 6 2.7534 1.6489 1.3018 6 6 3.8226 2.3181 0.4222 7 1 4.8430 2.1410 0.7621 8 7 3.5531 3.7310 0.1437 9 6 4.2934 4.6880 0.7376 10 8 5.1828 4.3796 1.5022 11 6 4.0157 6.1413 0.4515 12 6 4.9749 6.9997 1.2352 13 6 6.1890 7.3609 0.6805 14 6 7.0700 8.1480 1.3962 15 6 6.7357 8.5760 2.6739 16 7 7.6277 9.3755 3.4025 17 6 7.4103 10.6695 3.7811 18 6 6.1744 11.4803 3.4875 19 6 8.4912 11.0952 4.4657 20 6 9.4141 10.0306 4.5042 21 6 10.7705 10.0499 5.1605 22 8 11.7836 10.1460 4.1573 23 14 10.8868 11.5168 6.3031 24 6 8.8607 8.9914 3.8467 25 6 9.4938 7.6399 3.6376 26 6 5.5162 8.2118 3.2280 27 6 4.6393 7.4245 2.5075 28 6 3.3755 1.3720 -0.7045 29 1 -0.3634 0.5137 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0278 -0.0005 32 1 3.1167 0.7740 1.8410 33 1 2.2141 2.3476 1.9412 34 1 2.8420 3.9776 -0.4681 35 1 2.9932 6.3803 0.7435 36 1 4.1435 6.3328 -0.6139 37 1 6.4505 7.0236 -0.3116 38 1 8.0179 8.4301 0.9623 39 1 5.4531 11.3481 4.2939 40 1 6.4415 12.5341 3.4082 41 1 5.7347 11.1453 2.5482 42 1 8.6269 12.0743 4.9010 43 1 10.9108 9.1323 5.7318 44 1 12.6844 10.1639 4.5085 45 1 12.2082 11.5294 6.9805 46 1 10.6972 12.7743 5.5362 47 1 10.0663 7.6464 2.7101 48 1 10.1578 7.4167 4.4727 49 1 8.7154 6.8792 3.5789 50 1 5.2536 8.5430 4.2219 51 1 3.6905 7.1405 2.9384 52 1 3.3383 1.8472 -1.6847 53 1 3.9098 0.4220 -0.7146 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_12335864.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:10:45 Heat of formation + Delta-G solvation = -3.670583 kcal Electronic energy + Delta-G solvation = -32978.608706 eV Core-core repulsion = 28590.857725 eV Total energy + Delta-G solvation = -4387.750980 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.193 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -42.84494 -41.46083 -40.36998 -39.42600 -37.83166 -37.29888 -34.95529 -34.01852 -33.73721 -32.10141 -32.01841 -30.16471 -28.71683 -27.74334 -26.87992 -26.74391 -25.09713 -24.49568 -23.95205 -23.14963 -21.72530 -20.97098 -20.60676 -20.01720 -18.48918 -18.46771 -18.01245 -17.59459 -17.18585 -17.13300 -16.63452 -16.26419 -16.15741 -15.93668 -15.87278 -15.70535 -15.40238 -15.03336 -14.99706 -14.56570 -14.54799 -14.23689 -14.14558 -14.13207 -13.78205 -13.73679 -13.65651 -13.51570 -13.43592 -13.33630 -13.20308 -13.13839 -12.79905 -12.73933 -12.46990 -12.39677 -12.16925 -12.08338 -11.95402 -11.89774 -11.53445 -11.05612 -10.47258 -10.35017 -10.13205 -10.11716 -10.07361 -9.40607 -8.84418 -4.86459 -0.06727 0.27049 1.11738 1.39645 1.59178 1.61792 1.73356 1.84399 2.02824 2.05042 2.62004 2.87619 3.44695 3.53069 3.57259 3.61353 3.72332 3.74682 3.81476 3.84551 3.92386 3.98018 3.98393 4.13174 4.22060 4.25930 4.27621 4.39183 4.39806 4.49108 4.52421 4.53236 4.54958 4.57583 4.63369 4.63846 4.72447 4.73103 4.73430 4.79086 4.85315 4.91827 4.93648 4.93903 4.96483 4.99814 5.04091 5.10386 5.16446 5.27938 5.35693 5.43987 5.50711 5.73779 5.96571 6.15581 6.28086 6.50445 6.52059 6.69001 7.24004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.403 6.403 3 C 0.062 3.938 4 H 0.110 0.890 5 C -0.168 4.168 6 C 0.121 3.879 7 H 0.086 0.914 8 N -0.701 5.701 9 C 0.516 3.484 10 O -0.578 6.578 11 C -0.097 4.097 12 C -0.061 4.061 13 C -0.096 4.096 14 C -0.120 4.120 15 C 0.100 3.900 16 N -0.403 5.403 17 C 0.018 3.982 18 C -0.080 4.080 19 C -0.204 4.204 20 C -0.168 4.168 21 C -0.051 4.051 22 O -0.561 6.561 23 Si 0.773 3.227 24 C 0.032 3.968 25 C -0.076 4.076 26 C -0.112 4.112 27 C -0.094 4.094 28 C -0.136 4.136 29 H 0.047 0.953 30 H 0.055 0.945 31 H 0.089 0.911 32 H 0.086 0.914 33 H 0.073 0.927 34 H 0.419 0.581 35 H 0.139 0.861 36 H 0.136 0.864 37 H 0.145 0.855 38 H 0.120 0.880 39 H 0.086 0.914 40 H 0.089 0.911 41 H 0.062 0.938 42 H 0.149 0.851 43 H 0.080 0.920 44 H 0.389 0.611 45 H -0.285 1.285 46 H -0.301 1.301 47 H 0.068 0.932 48 H 0.088 0.912 49 H 0.058 0.942 50 H 0.133 0.867 51 H 0.150 0.850 52 H 0.096 0.904 53 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.728 -0.766 -2.777 9.191 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.322 6.322 3 C 0.004 3.996 4 H 0.128 0.872 5 C -0.207 4.207 6 C 0.015 3.985 7 H 0.104 0.896 8 N -0.354 5.354 9 C 0.304 3.696 10 O -0.457 6.457 11 C -0.136 4.136 12 C -0.062 4.062 13 C -0.115 4.115 14 C -0.139 4.139 15 C 0.011 3.989 16 N -0.078 5.078 17 C -0.090 4.090 18 C -0.138 4.138 19 C -0.227 4.227 20 C -0.174 4.174 21 C -0.160 4.160 22 O -0.370 6.370 23 Si 0.678 3.322 24 C -0.078 4.078 25 C -0.133 4.133 26 C -0.131 4.131 27 C -0.113 4.113 28 C -0.174 4.174 29 H 0.066 0.934 30 H 0.074 0.926 31 H 0.107 0.893 32 H 0.105 0.895 33 H 0.092 0.908 34 H 0.257 0.743 35 H 0.157 0.843 36 H 0.154 0.846 37 H 0.163 0.837 38 H 0.138 0.862 39 H 0.105 0.895 40 H 0.108 0.892 41 H 0.081 0.919 42 H 0.166 0.834 43 H 0.098 0.902 44 H 0.238 0.762 45 H -0.212 1.212 46 H -0.228 1.228 47 H 0.087 0.913 48 H 0.107 0.893 49 H 0.077 0.923 50 H 0.151 0.849 51 H 0.168 0.832 52 H 0.115 0.885 53 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -8.311 -0.613 -2.604 8.731 hybrid contribution 1.021 -0.099 -0.645 1.212 sum -7.290 -0.712 -3.250 8.013 Atomic orbital electron populations 1.22950 0.79818 1.03623 1.00867 1.87928 1.21242 1.28369 1.94642 1.23946 0.94218 0.85456 0.95946 0.87249 1.23945 0.98018 1.00853 0.97868 1.21490 0.99159 0.80704 0.97184 0.89555 1.45578 1.37359 1.04555 1.47929 1.21055 0.80643 0.88684 0.79225 1.90764 1.33417 1.84123 1.37384 1.20791 1.01458 0.87824 1.03577 1.19649 0.95030 0.96725 0.94775 1.21126 0.92917 0.96631 1.00814 1.21195 1.00560 0.99282 0.92874 1.17832 0.91448 0.97605 0.92017 1.41528 1.13387 1.10327 1.42519 1.20828 1.00035 0.84475 1.03703 1.20378 0.92233 0.98862 1.02286 1.20753 0.94750 0.99913 1.07329 1.18764 0.96075 0.94546 1.08059 1.24287 0.85586 1.10467 0.95648 1.86592 1.18628 1.96328 1.35458 0.93891 0.83300 0.74084 0.80912 1.20515 0.86100 0.98304 1.02875 1.20252 0.99809 0.90083 1.03195 1.21240 0.92951 0.98465 1.00478 1.21175 1.00244 0.96240 0.93615 1.23551 0.95354 0.99924 0.98549 0.93406 0.92595 0.89291 0.89513 0.90836 0.74339 0.84344 0.84562 0.83704 0.86211 0.89519 0.89185 0.91872 0.83376 0.90217 0.76175 1.21243 1.22822 0.91320 0.89306 0.92294 0.84877 0.83206 0.88536 0.88524 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 10.85 113.37 1.23 1.15 16 2 O -0.40 -0.66 10.71 -148.98 -1.60 -2.26 16 3 C 0.06 -0.22 4.19 31.12 0.13 -0.09 16 4 H 0.11 -0.93 7.87 -2.39 -0.02 -0.94 16 5 C -0.17 0.20 7.71 31.12 0.24 0.44 16 6 C 0.12 -0.22 4.32 45.51 0.20 -0.02 16 7 H 0.09 0.32 7.46 -2.39 -0.02 0.30 16 8 N -0.70 4.16 5.26 -440.05 -2.32 1.84 16 9 C 0.52 -0.57 7.82 87.66 0.69 0.11 16 10 O -0.58 -5.74 15.63 -3.03 -0.05 -5.79 16 11 C -0.10 0.79 5.83 29.10 0.17 0.96 16 12 C -0.06 0.07 4.37 -19.85 -0.09 -0.01 16 13 C -0.10 -0.10 9.69 22.25 0.22 0.11 16 14 C -0.12 -0.61 9.73 22.38 0.22 -0.39 16 15 C 0.10 0.63 4.65 38.08 0.18 0.80 16 16 N -0.40 -3.55 2.79 -320.27 -0.89 -4.44 16 17 C 0.02 0.14 6.81 41.04 0.28 0.42 16 18 C -0.08 -0.09 9.95 71.24 0.71 0.62 16 19 C -0.20 -1.79 9.27 22.15 0.21 -1.58 16 20 C -0.17 -1.66 5.39 -19.98 -0.11 -1.77 16 21 C -0.05 -0.30 2.59 71.23 0.18 -0.11 16 22 O -0.56 -4.48 12.86 -148.98 -1.92 -6.39 16 23 Si 0.77 2.52 30.84 68.60 2.12 4.64 16 24 C 0.03 0.33 6.81 41.04 0.28 0.60 16 25 C -0.08 -0.54 9.72 71.24 0.69 0.15 16 26 C -0.11 -0.35 9.74 22.38 0.22 -0.13 16 27 C -0.09 0.02 9.69 22.25 0.22 0.24 16 28 C -0.14 0.56 7.66 31.12 0.24 0.80 16 29 H 0.05 -0.23 8.14 -2.39 -0.02 -0.25 16 30 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 31 H 0.09 -0.38 8.14 -2.38 -0.02 -0.40 16 32 H 0.09 0.13 8.14 -2.39 -0.02 0.11 16 33 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.42 -5.46 8.70 -92.71 -0.81 -6.27 16 35 H 0.14 -1.93 8.08 -2.39 -0.02 -1.95 16 36 H 0.14 -1.82 8.08 -2.39 -0.02 -1.84 16 37 H 0.15 -0.42 8.06 -2.91 -0.02 -0.44 16 38 H 0.12 0.71 8.06 -2.91 -0.02 0.68 16 39 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 40 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 41 H 0.06 0.08 7.83 -2.39 -0.02 0.06 16 42 H 0.15 0.91 6.55 -2.91 -0.02 0.89 16 43 H 0.08 0.18 7.50 -2.39 -0.02 0.16 16 44 H 0.39 -0.26 8.74 -74.06 -0.65 -0.90 16 45 H -0.29 -1.73 7.11 99.48 0.71 -1.03 16 46 H -0.30 -3.14 7.06 99.48 0.70 -2.44 16 47 H 0.07 0.50 8.14 -2.39 -0.02 0.48 16 48 H 0.09 0.40 7.50 -2.39 -0.02 0.38 16 49 H 0.06 0.46 7.83 -2.39 -0.02 0.44 16 50 H 0.13 0.23 8.06 -2.91 -0.02 0.20 16 51 H 0.15 -0.74 8.06 -2.91 -0.02 -0.76 16 52 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 53 H 0.10 -0.19 8.14 -2.39 -0.02 -0.21 16 Total: 0.00 -26.26 438.88 0.94 -25.32 By element: Atomic # 1 Polarization: -14.73 SS G_CDS: -0.50 Total: -15.23 kcal Atomic # 6 Polarization: -3.79 SS G_CDS: 6.09 Total: 2.30 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: -3.21 Total: -2.60 kcal Atomic # 8 Polarization: -10.88 SS G_CDS: -3.56 Total: -14.44 kcal Atomic # 14 Polarization: 2.52 SS G_CDS: 2.12 Total: 4.64 kcal Total: -26.26 0.94 -25.32 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_12335864.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.650 kcal (2) G-P(sol) polarization free energy of solvation -26.257 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.936 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.321 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.671 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds