Wall clock time and date at job start Sat Mar 6 2021 21:11:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.42901 * 114.00265 * 2 1 4 4 H 1.09011 * 112.84518 * 341.20135 * 3 2 1 5 5 C 1.53780 * 113.61277 * 112.49963 * 3 2 1 6 6 C 1.53788 * 87.07795 * 139.98771 * 5 3 2 7 7 H 1.08997 * 113.69034 * 220.01195 * 6 5 3 8 8 N 1.46494 * 113.61224 * 89.12027 * 6 5 3 9 9 C 1.34774 * 120.00292 * 107.50389 * 8 6 5 10 10 O 1.21284 * 119.99861 * 359.97438 * 9 8 6 11 11 C 1.50700 * 120.00365 * 179.97438 * 9 8 6 12 12 N 1.46498 * 109.47489 * 179.97438 * 11 9 8 13 13 C 1.35046 * 125.92725 * 124.99951 * 12 11 9 14 14 C 1.35088 * 107.97540 * 180.02562 * 13 12 11 15 15 C 1.50695 * 126.07243 * 180.02562 * 14 13 12 16 16 O 1.42903 * 109.47088 * 254.97387 * 15 14 13 17 17 Si 1.86295 * 109.47203 * 14.97287 * 15 14 13 18 18 C 1.40844 * 107.85148 * 0.02562 * 14 13 12 19 19 C 1.48424 * 126.03844 * 180.02562 * 18 14 13 20 20 C 1.39320 * 120.11866 * 145.00087 * 19 18 14 21 21 C 1.38019 * 119.88095 * 180.02562 * 20 19 18 22 22 C 1.38325 * 120.11832 * 359.97438 * 21 20 19 23 23 C 1.38323 * 120.23744 * 0.02562 * 22 21 20 24 24 C 1.38022 * 120.12002 * 0.02562 * 23 22 21 25 25 N 1.31623 * 107.92657 * 0.26270 * 18 14 13 26 26 C 1.53778 * 113.61968 * 210.00268 * 3 2 1 27 27 H 1.08999 * 109.47343 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.47391 * 299.99593 * 1 2 3 29 29 H 1.09003 * 109.47503 * 59.99576 * 1 2 3 30 30 H 1.09003 * 113.61344 * 25.44243 * 5 3 2 31 31 H 1.08994 * 113.61935 * 254.53197 * 5 3 2 32 32 H 0.97002 * 119.99944 * 287.49688 * 8 6 5 33 33 H 1.09006 * 109.46767 * 60.00424 * 11 9 8 34 34 H 1.08998 * 109.47503 * 300.00314 * 11 9 8 35 35 H 1.07992 * 126.00861 * 0.03022 * 13 12 11 36 36 H 1.08995 * 109.47209 * 134.97497 * 15 14 13 37 37 H 0.96699 * 113.99745 * 59.99931 * 16 15 14 38 38 H 1.48505 * 110.00265 * 179.97438 * 17 15 14 39 39 H 1.48495 * 110.00269 * 301.32111 * 17 15 14 40 40 H 1.08000 * 120.06342 * 0.03949 * 20 19 18 41 41 H 1.08006 * 119.94549 * 180.02562 * 21 20 19 42 42 H 1.07994 * 119.87991 * 179.72372 * 22 21 20 43 43 H 1.08001 * 119.93381 * 180.02562 * 23 22 21 44 44 H 1.07999 * 120.05424 * 180.02562 * 24 23 22 45 45 H 1.08997 * 113.61068 * 105.47010 * 26 3 2 46 46 H 1.08993 * 113.61425 * 334.57158 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3136 2.0789 -0.3237 5 6 2.7534 1.6488 1.3018 6 6 3.8226 2.3182 0.4222 7 1 4.8430 2.1409 0.7620 8 7 3.5531 3.7309 0.1438 9 6 4.2933 4.6880 0.7376 10 8 5.1823 4.3796 1.5028 11 6 4.0165 6.1413 0.4507 12 7 4.9488 6.9758 1.2127 13 6 5.7693 7.9181 0.7003 14 6 6.4671 8.4628 1.7207 15 6 7.4990 9.5551 1.6066 16 8 8.8048 8.9945 1.7579 17 14 7.3616 10.3670 -0.0645 18 6 6.0589 7.8284 2.9101 19 6 6.5689 8.1180 4.2736 20 6 5.7140 8.0399 5.3709 21 6 6.1932 8.3107 6.6365 22 6 7.5198 8.6586 6.8167 23 6 8.3729 8.7375 5.7307 24 6 7.9038 8.4698 4.4605 25 7 5.1491 6.9298 2.5983 26 6 3.3755 1.3720 -0.7045 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 3.1166 0.7739 1.8410 31 1 2.2141 2.3476 1.9412 32 1 2.8420 3.9776 -0.4681 33 1 2.9937 6.3807 0.7421 34 1 4.1448 6.3323 -0.6147 35 1 5.8528 8.1886 -0.3419 36 1 7.3298 10.2976 2.3864 37 1 9.0242 8.3244 1.0962 38 1 8.3737 11.4467 -0.1894 39 1 7.5588 9.3589 -1.1368 40 1 4.6782 7.7678 5.2314 41 1 5.5315 8.2502 7.4880 42 1 7.8897 8.8740 7.8082 43 1 9.4079 9.0091 5.8770 44 1 8.5709 8.5313 3.6134 45 1 3.3382 1.8472 -1.6847 46 1 3.9087 0.4214 -0.7139 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_12622748.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:11:05 Heat of formation + Delta-G solvation = 38.485436 kcal Electronic energy + Delta-G solvation = -29445.374651 eV Core-core repulsion = 25305.101019 eV Total energy + Delta-G solvation = -4140.273631 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.46054 -41.38595 -39.89730 -39.49507 -37.86888 -37.36526 -34.80933 -34.05936 -32.22302 -31.68153 -31.27879 -28.91773 -27.84984 -26.88969 -26.04972 -25.15822 -23.97269 -23.28831 -22.17867 -21.46453 -20.88543 -20.73804 -18.80458 -18.63111 -17.83621 -17.68749 -17.26310 -16.89317 -16.67059 -16.54918 -16.25924 -16.18953 -15.87348 -15.69486 -15.43440 -15.34452 -14.83320 -14.49985 -14.27431 -14.12829 -14.10502 -13.90559 -13.67456 -13.64621 -13.52408 -13.41451 -13.24565 -12.50406 -12.30988 -12.27978 -12.08396 -11.97309 -11.66820 -11.64013 -11.49624 -11.23684 -10.58236 -10.56961 -10.39268 -10.25244 -9.67263 -9.61999 -9.14440 -4.96364 0.28176 0.71956 0.81123 1.19967 1.34299 1.37797 1.56573 1.85740 1.90914 1.99427 2.73152 3.10673 3.23622 3.31270 3.41202 3.42451 3.44981 3.61847 3.69945 3.73100 3.74983 3.81138 4.14380 4.24626 4.25028 4.28836 4.33704 4.36214 4.45987 4.51921 4.61816 4.64770 4.66156 4.67688 4.76848 4.78696 4.83431 4.89333 4.90422 4.95942 5.18116 5.33726 5.38417 5.46810 5.78244 5.80749 5.84912 5.86775 6.13847 6.22068 6.26513 6.49992 6.71163 6.99742 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.061 3.939 4 H 0.086 0.914 5 C -0.166 4.166 6 C 0.122 3.878 7 H 0.111 0.889 8 N -0.715 5.715 9 C 0.501 3.499 10 O -0.499 6.499 11 C 0.117 3.883 12 N -0.359 5.359 13 C 0.061 3.939 14 C -0.247 4.247 15 C -0.036 4.036 16 O -0.528 6.528 17 Si 0.686 3.314 18 C 0.135 3.865 19 C -0.021 4.021 20 C -0.091 4.091 21 C -0.127 4.127 22 C -0.112 4.112 23 C -0.125 4.125 24 C -0.099 4.099 25 N -0.249 5.249 26 C -0.142 4.142 27 H 0.087 0.913 28 H 0.042 0.958 29 H 0.042 0.958 30 H 0.102 0.898 31 H 0.074 0.926 32 H 0.401 0.599 33 H 0.119 0.881 34 H 0.129 0.871 35 H 0.178 0.822 36 H 0.116 0.884 37 H 0.375 0.625 38 H -0.255 1.255 39 H -0.260 1.260 40 H 0.123 0.877 41 H 0.124 0.876 42 H 0.122 0.878 43 H 0.124 0.876 44 H 0.154 0.846 45 H 0.079 0.921 46 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.771 1.799 -5.600 8.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.002 3.998 4 H 0.104 0.896 5 C -0.205 4.205 6 C 0.017 3.983 7 H 0.129 0.871 8 N -0.368 5.368 9 C 0.284 3.716 10 O -0.371 6.371 11 C -0.009 4.009 12 N -0.140 5.140 13 C -0.084 4.084 14 C -0.259 4.259 15 C -0.147 4.147 16 O -0.335 6.335 17 Si 0.587 3.413 18 C -0.031 4.031 19 C -0.023 4.023 20 C -0.111 4.111 21 C -0.145 4.145 22 C -0.130 4.130 23 C -0.143 4.143 24 C -0.118 4.118 25 N -0.069 5.069 26 C -0.180 4.180 27 H 0.106 0.894 28 H 0.061 0.939 29 H 0.061 0.939 30 H 0.120 0.880 31 H 0.093 0.907 32 H 0.236 0.764 33 H 0.137 0.863 34 H 0.147 0.853 35 H 0.195 0.805 36 H 0.134 0.866 37 H 0.223 0.777 38 H -0.180 1.180 39 H -0.185 1.185 40 H 0.141 0.859 41 H 0.142 0.858 42 H 0.140 0.860 43 H 0.142 0.858 44 H 0.171 0.829 45 H 0.098 0.902 46 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -5.484 1.006 -4.984 7.478 hybrid contribution 0.459 -0.175 -0.615 0.787 sum -5.025 0.831 -5.599 7.569 Atomic orbital electron populations 1.22824 0.80820 1.03151 0.99990 1.87963 1.19936 1.26967 1.94529 1.23825 0.93760 0.85602 0.96574 0.89589 1.23980 0.97659 1.01374 0.97477 1.21632 1.00603 0.79264 0.96809 0.87062 1.45599 1.37368 1.05534 1.48309 1.20572 0.82463 0.87405 0.81147 1.90852 1.30403 1.82456 1.33395 1.21496 0.94408 0.87946 0.97021 1.47838 1.31955 1.28745 1.05508 1.22283 0.93766 0.92671 0.99642 1.20373 1.06739 1.06805 0.91982 1.24246 0.80936 0.96351 1.13147 1.86492 1.31908 1.59183 1.55893 0.95166 0.90307 0.81385 0.74405 1.20641 0.95117 0.94046 0.93335 1.17777 0.93821 1.02085 0.88635 1.21205 0.99667 0.98279 0.91906 1.21080 0.95930 1.00580 0.96902 1.21296 0.93799 0.98898 0.99048 1.21135 0.99944 1.00764 0.92448 1.21902 0.94756 0.96447 0.98733 1.77804 1.19692 1.19933 0.89521 1.23620 0.95845 1.00514 0.97996 0.89412 0.93907 0.93917 0.88003 0.90726 0.76411 0.86277 0.85325 0.80502 0.86587 0.77703 1.17999 1.18532 0.85912 0.85837 0.86006 0.85773 0.82905 0.90216 0.87466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.38 10.71 -35.23 -0.38 -0.75 16 3 C 0.06 -0.08 4.19 -25.92 -0.11 -0.19 16 4 H 0.09 -0.28 7.87 -51.92 -0.41 -0.69 16 5 C -0.17 0.07 7.71 -25.92 -0.20 -0.13 16 6 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 7 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 8 N -0.71 1.74 5.26 -53.02 -0.28 1.46 16 9 C 0.50 0.22 7.86 -10.99 -0.09 0.13 16 10 O -0.50 -3.03 15.29 5.55 0.08 -2.94 16 11 C 0.12 -0.32 6.99 -5.19 -0.04 -0.35 16 12 N -0.36 -0.50 3.41 -62.58 -0.21 -0.71 16 13 C 0.06 -0.01 9.96 -17.26 -0.17 -0.18 16 14 C -0.25 -0.41 5.34 -104.76 -0.56 -0.97 16 15 C -0.04 -0.01 2.00 36.00 0.07 0.06 16 16 O -0.53 -0.62 10.10 -35.23 -0.36 -0.98 16 17 Si 0.69 -1.06 30.80 -169.99 -5.24 -6.29 16 18 C 0.13 0.60 6.74 -82.78 -0.56 0.04 16 19 C -0.02 -0.10 5.80 -104.90 -0.61 -0.71 16 20 C -0.09 -0.36 9.75 -39.26 -0.38 -0.75 16 21 C -0.13 -0.35 10.03 -39.63 -0.40 -0.75 16 22 C -0.11 -0.27 10.04 -39.52 -0.40 -0.67 16 23 C -0.12 -0.36 10.03 -39.63 -0.40 -0.76 16 24 C -0.10 -0.39 8.94 -39.26 -0.35 -0.74 16 25 N -0.25 -1.27 11.62 33.43 0.39 -0.88 16 26 C -0.14 0.28 7.66 -25.92 -0.20 0.08 16 27 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 30 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 32 H 0.40 -2.36 8.70 -40.82 -0.36 -2.72 16 33 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 34 H 0.13 -0.89 8.07 -51.93 -0.42 -1.31 16 35 H 0.18 -0.65 6.33 -52.49 -0.33 -0.98 16 36 H 0.12 0.05 7.83 -51.93 -0.41 -0.36 16 37 H 0.37 -0.48 8.70 45.56 0.40 -0.08 16 38 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 39 H -0.26 0.10 6.99 56.52 0.40 0.50 16 40 H 0.12 0.43 8.06 -52.49 -0.42 0.01 16 41 H 0.12 0.09 8.06 -52.48 -0.42 -0.33 16 42 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 43 H 0.12 0.13 8.06 -52.49 -0.42 -0.29 16 44 H 0.15 0.55 4.50 -52.49 -0.24 0.31 16 45 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 46 H 0.11 -0.14 8.14 -51.93 -0.42 -0.56 16 LS Contribution 386.32 15.07 5.82 5.82 Total: 0.00 -11.64 386.32 -10.17 -21.81 By element: Atomic # 1 Polarization: -4.90 SS G_CDS: -6.43 Total: -11.33 kcal Atomic # 6 Polarization: -1.63 SS G_CDS: -3.57 Total: -5.20 kcal Atomic # 7 Polarization: -0.03 SS G_CDS: -0.10 Total: -0.13 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -0.65 Total: -4.67 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.24 Total: -6.29 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -11.64 -10.17 -21.81 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_12622748.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.291 kcal (2) G-P(sol) polarization free energy of solvation -11.637 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.654 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.168 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.806 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.485 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds