Wall clock time and date at job start Sat Mar 6 2021 21:11:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42894 * 114.00475 * 2 1 4 4 H 1.09006 * 112.84843 * 341.19680 * 3 2 1 5 5 C 1.53776 * 113.69479 * 112.46661 * 3 2 1 6 6 C 1.53776 * 87.08553 * 139.99734 * 5 3 2 7 7 H 1.08999 * 113.69031 * 220.01103 * 6 5 3 8 8 N 1.46494 * 113.61937 * 89.11629 * 6 5 3 9 9 C 1.34779 * 119.99973 * 107.50131 * 8 6 5 10 10 O 1.21507 * 119.99808 * 0.02562 * 9 8 6 11 11 C 1.48171 * 119.99625 * 180.02562 * 9 8 6 12 12 N 1.32714 * 119.72755 * 0.02562 * 11 9 8 13 13 C 1.31517 * 121.64457 * 179.74934 * 12 11 9 14 14 C 1.38561 * 120.90317 * 0.49570 * 13 12 11 15 15 C 1.50696 * 120.32661 * 179.76778 * 14 13 12 16 16 O 1.42903 * 109.47131 * 119.71758 * 15 14 13 17 17 Si 1.86305 * 109.47185 * 359.72299 * 15 14 13 18 18 C 1.38624 * 119.35060 * 359.49386 * 14 13 12 19 19 C 1.38591 * 118.49074 * 0.25131 * 18 14 13 20 20 C 1.53785 * 113.61915 * 210.00577 * 3 2 1 21 21 H 1.08996 * 109.47186 * 180.02562 * 1 2 3 22 22 H 1.08998 * 109.46707 * 299.99958 * 1 2 3 23 23 H 1.08995 * 109.47414 * 59.99641 * 1 2 3 24 24 H 1.09004 * 113.61584 * 25.44314 * 5 3 2 25 25 H 1.08998 * 113.61763 * 254.54612 * 5 3 2 26 26 H 0.96997 * 120.00014 * 287.51084 * 8 6 5 27 27 H 1.07999 * 119.55420 * 180.23927 * 13 12 11 28 28 H 1.08999 * 109.47358 * 239.72118 * 15 14 13 29 29 H 0.96700 * 114.00311 * 300.00591 * 16 15 14 30 30 H 1.48499 * 109.99670 * 58.67633 * 17 15 14 31 31 H 1.48497 * 110.00233 * 179.97438 * 17 15 14 32 32 H 1.08001 * 120.75677 * 180.22855 * 18 14 13 33 33 H 1.07994 * 120.47383 * 180.02562 * 19 18 14 34 34 H 1.08998 * 113.61307 * 105.38058 * 20 3 2 35 35 H 1.09000 * 113.68895 * 334.49193 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0789 -0.3238 5 6 2.7532 1.6510 1.3013 6 6 3.8221 2.3198 0.4209 7 1 4.8425 2.1437 0.7611 8 7 3.5518 3.7321 0.1405 9 6 4.2914 4.6904 0.7331 10 8 5.1826 4.3829 1.4997 11 6 4.0175 6.1187 0.4498 12 7 3.0424 6.4483 -0.3879 13 6 2.7638 7.7039 -0.6627 14 6 3.4905 8.7357 -0.0907 15 6 3.1634 10.1697 -0.4187 16 8 2.7984 10.8607 0.7777 17 14 1.7438 10.2228 -1.6241 18 6 4.5176 8.4362 0.7907 19 6 4.7856 7.1045 1.0656 20 6 3.3756 1.3718 -0.7046 21 1 -0.3633 -1.0276 0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3634 0.5139 -0.8899 24 1 3.1170 0.7770 1.8417 25 1 2.2134 2.3502 1.9398 26 1 2.8405 3.9774 -0.4716 27 1 1.9602 7.9339 -1.3466 28 1 4.0356 10.6489 -0.8633 29 1 2.0279 10.4880 1.2277 30 1 0.5578 9.5446 -1.0421 31 1 1.4110 11.6317 -1.9552 32 1 5.0962 9.2226 1.2524 33 1 5.5783 6.8348 1.7477 34 1 3.3381 1.8457 -1.6855 35 1 3.9105 0.4222 -0.7136 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_13287726.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:11:33 Heat of formation + Delta-G solvation = -38.496978 kcal Electronic energy + Delta-G solvation = -19553.371831 eV Core-core repulsion = 16326.477181 eV Total energy + Delta-G solvation = -3226.894650 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.115 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.97757 -41.00262 -39.58481 -38.11858 -37.28811 -34.44476 -33.40809 -32.97401 -28.27900 -27.63348 -26.79527 -25.32787 -25.02985 -23.81661 -22.10584 -20.61364 -19.37443 -18.80290 -17.93604 -17.72158 -16.82276 -16.71372 -16.65548 -16.38308 -16.25527 -16.06895 -15.90899 -15.20146 -14.57995 -14.47099 -14.43318 -14.10383 -13.67326 -13.52204 -13.50364 -13.35606 -12.75904 -12.22471 -12.19051 -12.00104 -11.59043 -11.33884 -11.16923 -10.82791 -10.70153 -10.48667 -10.39025 -10.08750 -5.14339 -0.62875 0.00345 1.04649 1.41426 1.57551 1.80348 1.90702 2.63601 2.81324 2.87753 3.11877 3.36717 3.40672 3.50254 3.57906 3.66932 3.79867 3.86255 3.88028 4.07473 4.30294 4.33637 4.43120 4.43458 4.48538 4.69383 4.72596 4.74398 4.81522 4.87646 4.91925 4.92984 4.98466 5.29926 5.45728 6.16229 6.21975 6.26866 6.56961 7.08592 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.060 3.940 4 H 0.087 0.913 5 C -0.166 4.166 6 C 0.118 3.882 7 H 0.114 0.886 8 N -0.695 5.695 9 C 0.576 3.424 10 O -0.525 6.525 11 C 0.080 3.920 12 N -0.454 5.454 13 C 0.103 3.897 14 C -0.148 4.148 15 C -0.074 4.074 16 O -0.526 6.526 17 Si 0.685 3.315 18 C -0.053 4.053 19 C -0.107 4.107 20 C -0.141 4.141 21 H 0.087 0.913 22 H 0.042 0.958 23 H 0.043 0.957 24 H 0.102 0.898 25 H 0.073 0.927 26 H 0.412 0.588 27 H 0.165 0.835 28 H 0.126 0.874 29 H 0.378 0.622 30 H -0.255 1.255 31 H -0.251 1.251 32 H 0.148 0.852 33 H 0.153 0.847 34 H 0.081 0.919 35 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.429 1.149 -3.326 4.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.002 3.998 4 H 0.105 0.895 5 C -0.205 4.205 6 C 0.013 3.987 7 H 0.132 0.868 8 N -0.347 5.347 9 C 0.361 3.639 10 O -0.400 6.400 11 C -0.058 4.058 12 N -0.165 5.165 13 C -0.056 4.056 14 C -0.150 4.150 15 C -0.184 4.184 16 O -0.332 6.332 17 Si 0.585 3.415 18 C -0.079 4.079 19 C -0.128 4.128 20 C -0.179 4.179 21 H 0.105 0.895 22 H 0.060 0.940 23 H 0.061 0.939 24 H 0.121 0.879 25 H 0.092 0.908 26 H 0.248 0.752 27 H 0.181 0.819 28 H 0.144 0.856 29 H 0.226 0.774 30 H -0.180 1.180 31 H -0.175 1.175 32 H 0.166 0.834 33 H 0.171 0.829 34 H 0.099 0.901 35 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -2.454 0.675 -3.459 4.295 hybrid contribution -0.455 1.091 1.272 1.736 sum -2.909 1.765 -2.188 4.045 Atomic orbital electron populations 1.22817 0.80900 1.03046 1.00019 1.87952 1.19874 1.27026 1.94536 1.23830 0.93885 0.85561 0.96553 0.89494 1.23983 0.97685 1.01299 0.97515 1.21707 1.00652 0.79399 0.96981 0.86805 1.45516 1.36831 1.05068 1.47241 1.17841 0.81554 0.84207 0.80296 1.90824 1.31384 1.82324 1.35446 1.21141 0.94215 0.94353 0.96060 1.67511 1.15010 1.21251 1.12699 1.22620 0.98193 0.87163 0.97631 1.21600 0.97249 0.97604 0.98590 1.25022 1.10144 0.89184 0.94065 1.86638 1.51695 1.56912 1.37948 0.95040 0.77244 0.83440 0.85754 1.21568 0.95175 0.96439 0.94673 1.22234 0.99470 0.92334 0.98716 1.23617 0.95751 1.00402 0.98179 0.89469 0.93974 0.93880 0.87912 0.90796 0.75184 0.81872 0.85631 0.77416 1.17978 1.17538 0.83388 0.82906 0.90082 0.87391 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.61 10.72 -35.23 -0.38 -0.99 16 3 C 0.06 -0.01 4.18 -25.92 -0.11 -0.12 16 4 H 0.09 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.17 -0.03 7.71 -25.92 -0.20 -0.23 16 6 C 0.12 0.02 4.32 -67.12 -0.29 -0.27 16 7 H 0.11 0.15 7.46 -51.93 -0.39 -0.23 16 8 N -0.70 -0.29 5.25 -53.86 -0.28 -0.57 16 9 C 0.58 1.53 7.81 -12.18 -0.10 1.43 16 10 O -0.52 -2.94 15.92 5.36 0.09 -2.86 16 11 C 0.08 0.12 6.75 -83.01 -0.56 -0.44 16 12 N -0.45 -0.20 9.54 -9.80 -0.09 -0.29 16 13 C 0.10 -0.13 9.84 -17.57 -0.17 -0.30 16 14 C -0.15 0.22 5.40 -104.36 -0.56 -0.34 16 15 C -0.07 0.17 2.83 36.00 0.10 0.27 16 16 O -0.53 0.37 12.78 -35.23 -0.45 -0.08 16 17 Si 0.69 -1.99 29.82 -169.99 -5.07 -7.06 16 18 C -0.05 0.05 9.76 -39.31 -0.38 -0.34 16 19 C -0.11 -0.05 9.63 -39.05 -0.38 -0.43 16 20 C -0.14 0.13 7.66 -25.91 -0.20 -0.07 16 21 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 25 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 26 H 0.41 -0.44 8.03 -40.82 -0.33 -0.77 16 27 H 0.16 -0.58 4.89 -52.49 -0.26 -0.84 16 28 H 0.13 -0.40 7.96 -51.93 -0.41 -0.81 16 29 H 0.38 -1.29 8.70 45.56 0.40 -0.90 16 30 H -0.26 0.27 7.11 56.52 0.40 0.67 16 31 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 32 H 0.15 -0.33 8.06 -52.49 -0.42 -0.75 16 33 H 0.15 0.03 7.64 -52.49 -0.40 -0.37 16 34 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.11 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 302.61 15.07 4.56 4.56 Total: 0.00 -6.92 302.61 -7.76 -14.68 By element: Atomic # 1 Polarization: -3.25 SS G_CDS: -4.38 Total: -7.63 kcal Atomic # 6 Polarization: 1.99 SS G_CDS: -1.75 Total: 0.24 kcal Atomic # 7 Polarization: -0.49 SS G_CDS: -0.38 Total: -0.87 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -0.74 Total: -3.93 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: -5.07 Total: -7.06 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -6.92 -7.76 -14.68 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_13287726.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.821 kcal (2) G-P(sol) polarization free energy of solvation -6.920 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.741 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.676 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds