Wall clock time and date at job start Sat Mar 6 2021 21:11:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42904 * 113.99978 * 2 1 4 4 H 1.08993 * 112.84859 * 341.19167 * 3 2 1 5 5 C 1.54051 * 113.69310 * 112.46931 * 3 2 1 6 6 C 1.53777 * 86.98700 * 139.99003 * 5 3 2 7 7 H 1.09004 * 113.61454 * 219.97973 * 6 5 3 8 8 N 1.46499 * 113.61716 * 89.15735 * 6 5 3 9 9 C 1.34777 * 119.99665 * 106.14251 * 8 6 5 10 10 O 1.21623 * 120.00244 * 359.72094 * 9 8 6 11 11 C 1.47263 * 119.99630 * 179.72408 * 9 8 6 12 12 C 1.36773 * 126.94448 * 0.02562 * 11 9 8 13 13 N 1.34658 * 108.39662 * 179.97438 * 12 11 9 14 14 C 1.46498 * 124.84861 * 179.97438 * 13 12 11 15 15 C 1.36448 * 110.29756 * 0.02562 * 13 12 11 16 16 C 1.50704 * 125.56887 * 180.02562 * 15 13 12 17 17 O 1.42903 * 109.47061 * 29.99834 * 16 15 13 18 18 Si 1.86302 * 109.46876 * 149.99889 * 16 15 13 19 19 C 1.34487 * 108.85755 * 359.70753 * 15 13 12 20 20 C 1.53780 * 87.17096 * 334.56650 * 6 5 3 21 21 H 1.09002 * 109.46610 * 60.00316 * 1 2 3 22 22 H 1.08994 * 109.47293 * 179.97438 * 1 2 3 23 23 H 1.08993 * 109.47222 * 300.00380 * 1 2 3 24 24 H 1.08998 * 113.61464 * 25.47940 * 5 3 2 25 25 H 1.09002 * 113.69217 * 254.50608 * 5 3 2 26 26 H 0.97001 * 119.99790 * 285.85964 * 8 6 5 27 27 H 1.07995 * 125.79857 * 359.97438 * 12 11 9 28 28 H 1.09004 * 109.46848 * 90.02513 * 14 13 12 29 29 H 1.08997 * 109.47067 * 210.02312 * 14 13 12 30 30 H 1.08993 * 109.47256 * 330.02756 * 14 13 12 31 31 H 1.08998 * 109.46846 * 269.99600 * 16 15 13 32 32 H 0.96703 * 113.99891 * 60.00058 * 17 16 15 33 33 H 1.48503 * 109.99589 * 180.02562 * 18 16 15 34 34 H 1.48503 * 109.99899 * 301.31549 * 18 16 15 35 35 H 1.08003 * 126.83128 * 180.26598 * 19 15 13 36 36 H 1.09001 * 113.61616 * 140.02663 * 20 6 5 37 37 H 1.09000 * 113.61670 * 270.92790 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7545 1.6517 1.3036 6 6 3.8220 2.3199 0.4211 7 1 4.8425 2.1437 0.7612 8 7 3.5516 3.7321 0.1406 9 6 4.2745 4.6910 0.7525 10 8 5.1479 4.3841 1.5413 11 6 4.0068 6.1105 0.4660 12 6 3.0654 6.6131 -0.3894 13 7 3.1433 7.9572 -0.3649 14 6 2.2968 8.8593 -1.1497 15 6 4.1240 8.3589 0.4946 16 6 4.5034 9.7881 0.7854 17 8 3.3548 10.6253 0.6379 18 14 5.1464 9.9173 2.5292 19 6 4.6919 7.2712 1.0450 20 6 3.3756 1.3719 -0.7044 21 1 -0.3632 0.5138 -0.8901 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3633 0.5139 0.8899 24 1 3.1189 0.7779 1.8436 25 1 2.2160 2.3514 1.9428 26 1 2.8551 3.9769 -0.4886 27 1 2.3766 6.0309 -0.9835 28 1 1.4034 9.1089 -0.5773 29 1 2.8497 9.7709 -1.3764 30 1 2.0076 8.3691 -2.0793 31 1 5.2779 10.1075 0.0880 32 1 2.6240 10.3982 1.2290 33 1 5.5235 11.3221 2.8285 34 1 4.1109 9.4546 3.4878 35 1 5.4946 7.2553 1.7675 36 1 3.3382 1.8457 -1.6854 37 1 3.9095 0.4216 -0.7124 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_13287730.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:11:35 Heat of formation + Delta-G solvation = -29.059937 kcal Electronic energy + Delta-G solvation = -20284.885590 eV Core-core repulsion = 17031.088682 eV Total energy + Delta-G solvation = -3253.796908 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.47136 -41.10523 -39.48883 -37.88666 -37.24133 -34.16676 -33.56039 -31.30844 -28.00011 -27.46735 -26.74618 -26.35323 -25.06923 -23.62106 -21.10048 -20.77945 -20.43875 -19.10548 -17.94707 -17.46197 -16.95608 -16.81899 -16.76280 -16.37648 -16.10466 -15.76505 -15.46254 -15.36848 -14.98982 -14.54400 -14.13988 -14.05936 -13.63867 -13.55329 -13.39445 -13.26903 -13.19314 -13.09106 -12.41568 -12.15855 -12.01673 -11.92764 -11.51129 -11.05101 -10.95251 -10.45651 -10.13206 -9.57943 -9.21566 -4.89782 0.72264 1.03062 1.45090 1.62267 1.79988 2.03422 2.21494 2.52910 2.88589 3.20748 3.46558 3.55741 3.57536 3.83448 3.87112 3.95106 3.96604 4.27583 4.40344 4.42320 4.46035 4.51301 4.53244 4.55411 4.74655 4.76394 4.81731 4.85670 4.90837 4.96229 4.96879 4.99288 5.06089 5.53744 5.65673 5.95943 6.22163 6.28995 6.34864 6.61574 7.32505 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.400 6.400 3 C 0.064 3.936 4 H 0.107 0.893 5 C -0.169 4.169 6 C 0.121 3.879 7 H 0.089 0.911 8 N -0.700 5.700 9 C 0.591 3.409 10 O -0.591 6.591 11 C -0.261 4.261 12 C 0.072 3.928 13 N -0.427 5.427 14 C 0.062 3.938 15 C -0.023 4.023 16 C -0.042 4.042 17 O -0.540 6.540 18 Si 0.770 3.230 19 C -0.155 4.155 20 C -0.132 4.132 21 H 0.055 0.945 22 H 0.090 0.910 23 H 0.045 0.955 24 H 0.090 0.910 25 H 0.068 0.932 26 H 0.413 0.587 27 H 0.209 0.791 28 H 0.087 0.913 29 H 0.093 0.907 30 H 0.104 0.896 31 H 0.133 0.867 32 H 0.386 0.614 33 H -0.289 1.289 34 H -0.296 1.296 35 H 0.154 0.846 36 H 0.097 0.903 37 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.300 1.858 -5.341 7.750 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.319 6.319 3 C 0.006 3.994 4 H 0.125 0.875 5 C -0.208 4.208 6 C 0.015 3.985 7 H 0.107 0.893 8 N -0.351 5.351 9 C 0.382 3.618 10 O -0.472 6.472 11 C -0.272 4.272 12 C -0.065 4.065 13 N -0.101 5.101 14 C -0.078 4.078 15 C -0.132 4.132 16 C -0.152 4.152 17 O -0.348 6.348 18 Si 0.675 3.325 19 C -0.179 4.179 20 C -0.170 4.170 21 H 0.074 0.926 22 H 0.108 0.892 23 H 0.064 0.936 24 H 0.109 0.891 25 H 0.087 0.913 26 H 0.250 0.750 27 H 0.225 0.775 28 H 0.105 0.895 29 H 0.112 0.888 30 H 0.123 0.877 31 H 0.151 0.849 32 H 0.235 0.765 33 H -0.216 1.216 34 H -0.222 1.222 35 H 0.172 0.828 36 H 0.115 0.885 37 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -4.523 2.379 -4.650 6.909 hybrid contribution -1.559 0.291 -0.035 1.586 sum -6.082 2.670 -4.684 8.128 Atomic orbital electron populations 1.22948 0.79897 1.03635 1.00792 1.87928 1.21161 1.28231 1.94621 1.23966 0.94220 0.85379 0.95859 0.87508 1.24008 0.98074 1.00815 0.97889 1.21521 0.99358 0.80207 0.97422 0.89329 1.45341 1.38751 1.04580 1.46439 1.17693 0.80012 0.85079 0.79064 1.90757 1.34889 1.83937 1.37603 1.20287 1.06016 0.91801 1.09060 1.22404 1.00203 0.83426 1.00471 1.43726 1.27488 1.06217 1.32639 1.22452 0.94799 0.94301 0.96248 1.20846 0.96738 0.96322 0.99284 1.24699 0.92000 0.84267 1.14267 1.86561 1.26402 1.57778 1.64036 0.93363 0.87276 0.80314 0.71580 1.21821 1.02727 0.89867 1.03519 1.23539 0.95201 0.99890 0.98372 0.92590 0.89180 0.93586 0.89130 0.91328 0.74963 0.77485 0.89469 0.88833 0.87739 0.84906 0.76478 1.21553 1.22241 0.82837 0.88497 0.88063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.40 -1.11 10.72 -148.98 -1.60 -2.71 16 3 C 0.06 -0.10 4.20 31.21 0.13 0.03 16 4 H 0.11 -0.67 7.87 -2.39 -0.02 -0.69 16 5 C -0.17 -0.26 7.73 31.21 0.24 -0.02 16 6 C 0.12 0.19 4.30 45.52 0.20 0.39 16 7 H 0.09 0.58 7.50 -2.39 -0.02 0.56 16 8 N -0.70 0.08 5.25 -443.46 -2.33 -2.25 16 9 C 0.59 4.45 7.81 86.62 0.68 5.12 16 10 O -0.59 -10.11 16.59 -4.10 -0.07 -10.18 16 11 C -0.26 -0.96 6.29 -19.04 -0.12 -1.08 16 12 C 0.07 -0.28 10.83 83.92 0.91 0.63 16 13 N -0.43 1.47 3.09 -533.25 -1.65 -0.18 16 14 C 0.06 -0.57 9.81 127.77 1.25 0.68 16 15 C -0.02 0.00 6.14 40.98 0.25 0.25 16 16 C -0.04 0.10 2.87 71.24 0.20 0.30 16 17 O -0.54 1.36 10.32 -148.98 -1.54 -0.18 16 18 Si 0.77 -0.60 31.11 68.60 2.13 1.54 16 19 C -0.16 -0.63 9.49 23.62 0.22 -0.41 16 20 C -0.13 0.31 7.65 31.12 0.24 0.54 16 21 H 0.06 -0.30 8.14 -2.39 -0.02 -0.32 16 22 H 0.09 -0.32 8.14 -2.39 -0.02 -0.33 16 23 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 24 H 0.09 0.31 8.14 -2.39 -0.02 0.29 16 25 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 26 H 0.41 -3.13 7.65 -92.71 -0.71 -3.84 16 27 H 0.21 -2.65 7.45 -2.91 -0.02 -2.67 16 28 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 29 H 0.09 -0.67 6.73 -2.39 -0.02 -0.69 16 30 H 0.10 -1.38 8.13 -2.39 -0.02 -1.40 16 31 H 0.13 -0.57 7.96 -2.39 -0.02 -0.59 16 32 H 0.39 -2.66 8.70 -74.06 -0.64 -3.31 16 33 H -0.29 -1.46 7.11 99.48 0.71 -0.76 16 34 H -0.30 -1.66 7.11 99.48 0.71 -0.95 16 35 H 0.15 0.54 6.88 -2.91 -0.02 0.52 16 36 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 37 H 0.10 -0.10 8.14 -2.39 -0.02 -0.12 16 Total: 0.00 -22.41 313.25 0.16 -22.24 By element: Atomic # 1 Polarization: -15.68 SS G_CDS: -0.23 Total: -15.91 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: 5.43 Total: 7.62 kcal Atomic # 7 Polarization: 1.55 SS G_CDS: -3.98 Total: -2.42 kcal Atomic # 8 Polarization: -9.87 SS G_CDS: -3.20 Total: -13.07 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: 2.13 Total: 1.54 kcal Total: -22.41 0.16 -22.24 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_13287730.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.817 kcal (2) G-P(sol) polarization free energy of solvation -22.406 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.223 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.243 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds