Wall clock time and date at job start Sat Mar 6 2021 21:11:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42899 * 113.99629 * 2 1 4 4 H 1.09003 * 112.85355 * 18.80456 * 3 2 1 5 5 C 1.53782 * 113.61338 * 150.00210 * 3 2 1 6 6 C 1.53784 * 87.08244 * 139.98155 * 5 3 2 7 7 H 1.09000 * 113.61571 * 219.93533 * 6 5 3 8 8 N 1.46497 * 113.61581 * 89.11749 * 6 5 3 9 9 C 1.34781 * 120.00215 * 155.00354 * 8 6 5 10 10 O 1.21593 * 119.99537 * 359.97438 * 9 8 6 11 11 C 1.47532 * 119.99956 * 179.97438 * 9 8 6 12 12 C 1.40144 * 120.18698 * 179.71703 * 11 9 8 13 13 O 1.35654 * 120.15140 * 0.02562 * 12 11 9 14 14 C 1.38707 * 119.69681 * 179.77371 * 12 11 9 15 15 C 1.38062 * 120.08316 * 0.50940 * 14 12 11 16 16 C 1.50695 * 119.80477 * 179.72206 * 15 14 12 17 17 O 1.42901 * 109.47266 * 65.02079 * 16 15 14 18 18 Si 1.86301 * 109.47355 * 185.02267 * 16 15 14 19 19 C 1.38546 * 120.39081 * 359.74367 * 15 14 12 20 20 C 1.37791 * 120.29797 * 0.02562 * 19 15 14 21 21 C 1.53784 * 87.08116 * 334.56759 * 6 5 3 22 22 H 1.09002 * 109.47382 * 59.99956 * 1 2 3 23 23 H 1.09001 * 109.46938 * 299.99942 * 1 2 3 24 24 H 1.09004 * 109.46926 * 180.02562 * 1 2 3 25 25 H 1.09000 * 113.61596 * 254.52893 * 5 3 2 26 26 H 1.08998 * 113.61434 * 25.42883 * 5 3 2 27 27 H 0.96997 * 120.00207 * 334.99385 * 8 6 5 28 28 H 0.96698 * 113.99850 * 89.99316 * 13 12 11 29 29 H 1.07996 * 119.95866 * 180.23444 * 14 12 11 30 30 H 1.09001 * 109.47446 * 305.02630 * 16 15 14 31 31 H 0.96706 * 114.00114 * 60.00177 * 17 16 15 32 32 H 1.48497 * 110.00008 * 179.97438 * 18 16 15 33 33 H 1.48499 * 109.99529 * 301.31916 * 18 16 15 34 34 H 1.08002 * 119.84953 * 180.02562 * 19 15 14 35 35 H 1.08007 * 120.04155 * 179.97438 * 20 19 15 36 36 H 1.08999 * 113.61243 * 270.88512 * 21 6 5 37 37 H 1.08998 * 113.61929 * 139.98335 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 0.3238 5 6 3.3755 1.3720 0.7045 6 6 3.8226 2.3183 -0.4222 7 1 4.8430 2.1411 -0.7621 8 7 3.5532 3.7311 -0.1436 9 6 4.2933 4.6882 -0.7375 10 8 5.1850 4.3790 -1.5041 11 6 4.0215 6.1109 -0.4572 12 6 4.7925 7.1092 -1.0680 13 8 5.7925 6.7720 -1.9204 14 6 4.5251 8.4438 -0.8009 15 6 3.5106 8.7853 0.0710 16 6 3.2296 10.2371 0.3615 17 8 2.7727 10.8814 -0.8294 18 14 1.9183 10.3644 1.6787 19 6 2.7496 7.8012 0.6808 20 6 2.9984 6.4706 0.4233 21 6 2.7534 1.6490 -1.3018 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 3.3384 1.8471 1.6848 26 1 3.9088 0.4214 0.7137 27 1 2.8420 3.9777 0.4682 28 1 5.5144 6.6991 -2.8437 29 1 5.1142 9.2167 -1.2721 30 1 4.1421 10.7213 0.7092 31 1 1.9623 10.5017 -1.1959 32 1 1.6326 11.7912 1.9747 33 1 0.6792 9.6803 1.2295 34 1 1.9579 8.0782 1.3611 35 1 2.4029 5.7068 0.9013 36 1 3.1166 0.7742 -1.8411 37 1 2.2139 2.3477 -1.9412 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_13422076.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:11:51 Heat of formation + Delta-G solvation = -88.306034 kcal Electronic energy + Delta-G solvation = -21705.373680 eV Core-core repulsion = 18223.062867 eV Total energy + Delta-G solvation = -3482.310814 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.81258 -40.82315 -39.45957 -38.47340 -37.29455 -37.21238 -34.25904 -32.49840 -31.16770 -28.10558 -27.50059 -26.83428 -25.21932 -24.01928 -23.51704 -21.84496 -20.69404 -19.45644 -18.87713 -18.33842 -17.88124 -17.27524 -16.77344 -16.68371 -16.38630 -16.22449 -16.11663 -15.98629 -15.69931 -15.20850 -15.02259 -14.52211 -14.15712 -13.82096 -13.67221 -13.59092 -13.42926 -13.21969 -13.04004 -12.44968 -12.26466 -12.14105 -12.03832 -11.69450 -11.56534 -10.92368 -10.69381 -10.53467 -10.24139 -10.08782 -9.85306 -5.08829 -0.46769 0.04743 1.11611 1.45154 1.70219 1.84177 1.95040 2.51657 2.76644 3.02848 3.24710 3.33831 3.38782 3.46160 3.54551 3.65745 3.76666 3.78914 3.92806 4.14570 4.28007 4.30485 4.38080 4.38752 4.52096 4.63371 4.67697 4.69164 4.72731 4.83765 4.88095 4.90437 4.93046 5.07562 5.14141 5.44216 5.47689 6.17043 6.24111 6.37155 6.66674 7.16024 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.060 3.940 4 H 0.085 0.915 5 C -0.142 4.142 6 C 0.122 3.878 7 H 0.114 0.886 8 N -0.713 5.713 9 C 0.562 3.438 10 O -0.513 6.513 11 C -0.164 4.164 12 C 0.174 3.826 13 O -0.476 6.476 14 C -0.128 4.128 15 C -0.073 4.073 16 C -0.081 4.081 17 O -0.526 6.526 18 Si 0.691 3.309 19 C -0.137 4.137 20 C -0.065 4.065 21 C -0.166 4.166 22 H 0.042 0.958 23 H 0.042 0.958 24 H 0.087 0.913 25 H 0.079 0.921 26 H 0.107 0.893 27 H 0.398 0.602 28 H 0.398 0.602 29 H 0.141 0.859 30 H 0.123 0.877 31 H 0.377 0.623 32 H -0.255 1.255 33 H -0.258 1.258 34 H 0.136 0.864 35 H 0.133 0.867 36 H 0.102 0.898 37 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.830 0.061 3.316 5.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.002 3.998 4 H 0.103 0.897 5 C -0.181 4.181 6 C 0.016 3.984 7 H 0.131 0.869 8 N -0.366 5.366 9 C 0.349 3.651 10 O -0.389 6.389 11 C -0.168 4.168 12 C 0.127 3.873 13 O -0.287 6.287 14 C -0.147 4.147 15 C -0.074 4.074 16 C -0.191 4.191 17 O -0.332 6.332 18 Si 0.592 3.408 19 C -0.155 4.155 20 C -0.084 4.084 21 C -0.205 4.205 22 H 0.060 0.940 23 H 0.061 0.939 24 H 0.106 0.894 25 H 0.098 0.902 26 H 0.126 0.874 27 H 0.234 0.766 28 H 0.257 0.743 29 H 0.159 0.841 30 H 0.141 0.859 31 H 0.225 0.775 32 H -0.180 1.180 33 H -0.183 1.183 34 H 0.154 0.846 35 H 0.151 0.849 36 H 0.120 0.880 37 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -3.981 0.311 3.551 5.344 hybrid contribution -1.302 0.275 -1.246 1.823 sum -5.283 0.585 2.305 5.794 Atomic orbital electron populations 1.22822 0.80894 1.03109 0.99963 1.87965 1.19868 1.26994 1.94538 1.23831 0.93808 0.85532 0.96669 0.89686 1.23629 0.95732 1.00569 0.98121 1.21639 1.00622 0.79396 0.96710 0.86852 1.45610 1.37273 1.05477 1.48244 1.18042 0.81566 0.84918 0.80548 1.90845 1.30427 1.82818 1.34794 1.20403 0.99365 0.93380 1.03644 1.18509 0.86286 0.90358 0.92111 1.84763 1.31697 1.91178 1.21078 1.21365 0.98036 0.95432 0.99853 1.20383 0.95101 0.96081 0.95851 1.25162 1.08668 0.90121 0.95141 1.86641 1.46364 1.59499 1.40726 0.94856 0.78239 0.82492 0.85229 1.20997 1.00799 0.92545 1.01140 1.21128 0.95295 0.96488 0.95488 1.23988 0.97734 1.01335 0.97450 0.93958 0.93929 0.89435 0.90200 0.87417 0.76606 0.74308 0.84136 0.85895 0.77541 1.17958 1.18331 0.84626 0.84937 0.87971 0.90843 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.42 10.71 -35.23 -0.38 -0.80 16 3 C 0.06 -0.06 4.19 -25.92 -0.11 -0.17 16 4 H 0.09 -0.23 7.87 -51.93 -0.41 -0.64 16 5 C -0.14 0.21 7.66 -25.92 -0.20 0.01 16 6 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 7 H 0.11 0.16 7.46 -51.93 -0.39 -0.22 16 8 N -0.71 0.59 5.21 -54.05 -0.28 0.31 16 9 C 0.56 1.20 7.76 -12.47 -0.10 1.11 16 10 O -0.51 -3.03 14.76 -16.59 -0.24 -3.28 16 11 C -0.16 -0.11 5.89 -104.85 -0.62 -0.73 16 12 C 0.17 0.26 6.72 -38.69 -0.26 0.00 16 13 O -0.48 -1.22 11.58 -40.54 -0.47 -1.69 16 14 C -0.13 -0.03 9.60 -39.47 -0.38 -0.41 16 15 C -0.07 0.09 5.35 -104.58 -0.56 -0.47 16 16 C -0.08 0.13 2.79 36.00 0.10 0.23 16 17 O -0.53 0.05 12.83 -35.23 -0.45 -0.41 16 18 Si 0.69 -1.72 29.87 -169.99 -5.08 -6.80 16 19 C -0.14 0.32 8.64 -39.63 -0.34 -0.03 16 20 C -0.07 0.14 9.53 -39.20 -0.37 -0.24 16 21 C -0.17 0.07 7.71 -25.91 -0.20 -0.13 16 22 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 23 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 24 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 25 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 26 H 0.11 -0.11 8.14 -51.93 -0.42 -0.53 16 27 H 0.40 -1.45 6.73 -40.82 -0.27 -1.73 16 28 H 0.40 -0.42 9.06 45.56 0.41 -0.01 16 29 H 0.14 -0.01 8.06 -52.49 -0.42 -0.43 16 30 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 31 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 32 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 33 H -0.26 0.26 7.00 56.52 0.40 0.65 16 34 H 0.14 -0.58 4.81 -52.49 -0.25 -0.83 16 35 H 0.13 -0.68 6.40 -52.48 -0.34 -1.02 16 36 H 0.10 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 LS Contribution 314.14 15.07 4.73 4.73 Total: 0.00 -8.92 314.14 -8.25 -17.16 By element: Atomic # 1 Polarization: -5.30 SS G_CDS: -3.85 Total: -9.15 kcal Atomic # 6 Polarization: 2.14 SS G_CDS: -2.23 Total: -0.09 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.28 Total: 0.31 kcal Atomic # 8 Polarization: -4.63 SS G_CDS: -1.54 Total: -6.17 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.08 Total: -6.80 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -8.92 -8.25 -17.16 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_13422076.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.143 kcal (2) G-P(sol) polarization free energy of solvation -8.916 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.247 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.163 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds