Wall clock time and date at job start Sat Mar 6 2021 21:11:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42899 * 113.99629 * 2 1 4 4 H 1.09003 * 112.85355 * 18.80456 * 3 2 1 5 5 C 1.53782 * 113.61338 * 150.00210 * 3 2 1 6 6 C 1.53784 * 87.08244 * 139.98155 * 5 3 2 7 7 H 1.09000 * 113.61571 * 219.93533 * 6 5 3 8 8 N 1.46497 * 113.61581 * 89.11749 * 6 5 3 9 9 C 1.34781 * 120.00215 * 155.00354 * 8 6 5 10 10 O 1.21593 * 119.99537 * 359.97438 * 9 8 6 11 11 C 1.47532 * 119.99956 * 179.97438 * 9 8 6 12 12 C 1.40144 * 120.18698 * 179.71703 * 11 9 8 13 13 O 1.35654 * 120.15140 * 0.02562 * 12 11 9 14 14 C 1.38707 * 119.69681 * 179.77371 * 12 11 9 15 15 C 1.38062 * 120.08316 * 0.50940 * 14 12 11 16 16 C 1.50695 * 119.80477 * 179.72206 * 15 14 12 17 17 O 1.42901 * 109.47266 * 65.02079 * 16 15 14 18 18 Si 1.86301 * 109.47355 * 185.02267 * 16 15 14 19 19 C 1.38546 * 120.39081 * 359.74367 * 15 14 12 20 20 C 1.37791 * 120.29797 * 0.02562 * 19 15 14 21 21 C 1.53784 * 87.08116 * 334.56759 * 6 5 3 22 22 H 1.09002 * 109.47382 * 59.99956 * 1 2 3 23 23 H 1.09001 * 109.46938 * 299.99942 * 1 2 3 24 24 H 1.09004 * 109.46926 * 180.02562 * 1 2 3 25 25 H 1.09000 * 113.61596 * 254.52893 * 5 3 2 26 26 H 1.08998 * 113.61434 * 25.42883 * 5 3 2 27 27 H 0.96997 * 120.00207 * 334.99385 * 8 6 5 28 28 H 0.96698 * 113.99850 * 89.99316 * 13 12 11 29 29 H 1.07996 * 119.95866 * 180.23444 * 14 12 11 30 30 H 1.09001 * 109.47446 * 305.02630 * 16 15 14 31 31 H 0.96706 * 114.00114 * 60.00177 * 17 16 15 32 32 H 1.48497 * 110.00008 * 179.97438 * 18 16 15 33 33 H 1.48499 * 109.99529 * 301.31916 * 18 16 15 34 34 H 1.08002 * 119.84953 * 180.02562 * 19 15 14 35 35 H 1.08007 * 120.04155 * 179.97438 * 20 19 15 36 36 H 1.08999 * 113.61243 * 270.88512 * 21 6 5 37 37 H 1.08998 * 113.61929 * 139.98335 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 0.3238 5 6 3.3755 1.3720 0.7045 6 6 3.8226 2.3183 -0.4222 7 1 4.8430 2.1411 -0.7621 8 7 3.5532 3.7311 -0.1436 9 6 4.2933 4.6882 -0.7375 10 8 5.1850 4.3790 -1.5041 11 6 4.0215 6.1109 -0.4572 12 6 4.7925 7.1092 -1.0680 13 8 5.7925 6.7720 -1.9204 14 6 4.5251 8.4438 -0.8009 15 6 3.5106 8.7853 0.0710 16 6 3.2296 10.2371 0.3615 17 8 2.7727 10.8814 -0.8294 18 14 1.9183 10.3644 1.6787 19 6 2.7496 7.8012 0.6808 20 6 2.9984 6.4706 0.4233 21 6 2.7534 1.6490 -1.3018 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 3.3384 1.8471 1.6848 26 1 3.9088 0.4214 0.7137 27 1 2.8420 3.9777 0.4682 28 1 5.5144 6.6991 -2.8437 29 1 5.1142 9.2167 -1.2721 30 1 4.1421 10.7213 0.7092 31 1 1.9623 10.5017 -1.1959 32 1 1.6326 11.7912 1.9747 33 1 0.6792 9.6803 1.2295 34 1 1.9579 8.0782 1.3611 35 1 2.4029 5.7068 0.9013 36 1 3.1166 0.7742 -1.8411 37 1 2.2139 2.3477 -1.9412 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_13422076.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:11:51 Heat of formation + Delta-G solvation = -91.365661 kcal Electronic energy + Delta-G solvation = -21705.506356 eV Core-core repulsion = 18223.062867 eV Total energy + Delta-G solvation = -3482.443489 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.82800 -40.77486 -39.49633 -38.48818 -37.29471 -37.19422 -34.31470 -32.43665 -31.11710 -28.01520 -27.41451 -26.76649 -25.16683 -23.92625 -23.50676 -21.84547 -20.68875 -19.44747 -18.87040 -18.29534 -17.83611 -17.26210 -16.70262 -16.67492 -16.35070 -16.17457 -16.07226 -15.93375 -15.72746 -15.24498 -14.87655 -14.51655 -14.10911 -13.76337 -13.65443 -13.51053 -13.36514 -13.17011 -12.97837 -12.37776 -12.17762 -12.16242 -11.96071 -11.62812 -11.50217 -11.01725 -10.64165 -10.46940 -10.27774 -10.03104 -9.80045 -4.89139 -0.43571 0.13990 1.28258 1.61193 1.66885 1.94301 1.99702 2.54634 2.87825 3.09742 3.39730 3.41945 3.46991 3.53075 3.66503 3.75843 3.82876 3.93865 4.07310 4.26078 4.37719 4.42114 4.49410 4.55878 4.63190 4.73923 4.74814 4.75668 4.85768 4.92172 4.93916 4.98863 5.01948 5.13828 5.23648 5.45071 5.58809 6.28322 6.41897 6.46618 6.69104 7.12103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.401 6.401 3 C 0.063 3.937 4 H 0.110 0.890 5 C -0.134 4.134 6 C 0.119 3.881 7 H 0.089 0.911 8 N -0.695 5.695 9 C 0.558 3.442 10 O -0.563 6.563 11 C -0.179 4.179 12 C 0.152 3.848 13 O -0.499 6.499 14 C -0.140 4.140 15 C -0.069 4.069 16 C -0.094 4.094 17 O -0.548 6.548 18 Si 0.779 3.221 19 C -0.132 4.132 20 C -0.052 4.052 21 C -0.167 4.167 22 H 0.046 0.954 23 H 0.056 0.944 24 H 0.089 0.911 25 H 0.098 0.902 26 H 0.101 0.899 27 H 0.415 0.585 28 H 0.406 0.594 29 H 0.134 0.866 30 H 0.124 0.876 31 H 0.388 0.612 32 H -0.308 1.308 33 H -0.268 1.268 34 H 0.164 0.836 35 H 0.169 0.831 36 H 0.091 0.909 37 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.711 0.026 5.019 8.381 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.320 6.320 3 C 0.005 3.995 4 H 0.127 0.873 5 C -0.172 4.172 6 C 0.014 3.986 7 H 0.107 0.893 8 N -0.348 5.348 9 C 0.347 3.653 10 O -0.442 6.442 11 C -0.183 4.183 12 C 0.106 3.894 13 O -0.312 6.312 14 C -0.158 4.158 15 C -0.069 4.069 16 C -0.202 4.202 17 O -0.356 6.356 18 Si 0.683 3.317 19 C -0.149 4.149 20 C -0.070 4.070 21 C -0.206 4.206 22 H 0.065 0.935 23 H 0.075 0.925 24 H 0.107 0.893 25 H 0.116 0.884 26 H 0.119 0.881 27 H 0.254 0.746 28 H 0.266 0.734 29 H 0.152 0.848 30 H 0.142 0.858 31 H 0.238 0.762 32 H -0.236 1.236 33 H -0.194 1.194 34 H 0.181 0.819 35 H 0.187 0.813 36 H 0.109 0.891 37 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -5.887 0.246 5.263 7.901 hybrid contribution -0.740 0.346 -1.796 1.973 sum -6.628 0.592 3.467 7.503 Atomic orbital electron populations 1.22958 0.79837 1.03635 1.00869 1.87933 1.21208 1.28196 1.94624 1.23933 0.94225 0.85527 0.95815 0.87272 1.23563 0.95307 0.99889 0.98439 1.21560 0.99500 0.79892 0.97683 0.89254 1.45436 1.36970 1.04771 1.47668 1.18347 0.81092 0.85880 0.79979 1.90819 1.32670 1.83560 1.37111 1.20410 1.00661 0.92234 1.04981 1.18768 0.86785 0.91193 0.92633 1.84719 1.32985 1.91411 1.22041 1.21353 0.98891 0.94790 1.00788 1.20490 0.94555 0.96630 0.95272 1.25471 1.09705 0.89798 0.95249 1.86611 1.47319 1.60126 1.41547 0.93903 0.76032 0.78851 0.82880 1.21284 1.00769 0.92077 1.00809 1.21490 0.94044 0.97568 0.93941 1.23957 0.97864 1.00864 0.97924 0.93498 0.92508 0.89259 0.88391 0.88101 0.74603 0.73372 0.84801 0.85785 0.76224 1.23618 1.19350 0.81946 0.81336 0.89092 0.91020 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 10.85 113.37 1.23 1.15 16 2 O -0.40 -0.65 10.71 -148.98 -1.60 -2.24 16 3 C 0.06 -0.19 4.19 31.12 0.13 -0.06 16 4 H 0.11 -0.89 7.87 -2.39 -0.02 -0.90 16 5 C -0.13 0.48 7.66 31.12 0.24 0.72 16 6 C 0.12 -0.02 4.32 45.52 0.20 0.18 16 7 H 0.09 0.45 7.46 -2.39 -0.02 0.43 16 8 N -0.70 1.55 5.21 -443.19 -2.31 -0.76 16 9 C 0.56 2.79 7.76 86.69 0.67 3.47 16 10 O -0.56 -7.95 14.76 16.91 0.25 -7.70 16 11 C -0.18 -0.25 5.89 -20.01 -0.12 -0.37 16 12 C 0.15 0.67 6.72 22.84 0.15 0.82 16 13 O -0.50 -3.87 11.58 -68.78 -0.80 -4.66 16 14 C -0.14 -0.19 9.60 22.34 0.21 0.03 16 15 C -0.07 0.21 5.35 -19.83 -0.11 0.10 16 16 C -0.09 0.35 2.79 71.23 0.20 0.55 16 17 O -0.55 0.08 12.83 -148.98 -1.91 -1.83 16 18 Si 0.78 -4.99 29.87 68.60 2.05 -2.94 16 19 C -0.13 0.92 8.64 22.24 0.19 1.11 16 20 C -0.05 0.33 9.53 22.52 0.21 0.55 16 21 C -0.17 0.07 7.71 31.12 0.24 0.31 16 22 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 23 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 24 H 0.09 -0.39 8.14 -2.38 -0.02 -0.41 16 25 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 26 H 0.10 -0.19 8.14 -2.39 -0.02 -0.21 16 27 H 0.42 -4.00 6.73 -92.71 -0.62 -4.62 16 28 H 0.41 0.42 9.06 -74.06 -0.67 -0.25 16 29 H 0.13 0.24 8.06 -2.91 -0.02 0.22 16 30 H 0.12 -0.53 7.96 -2.39 -0.02 -0.55 16 31 H 0.39 -2.50 8.70 -74.05 -0.64 -3.15 16 32 H -0.31 -0.81 7.11 99.48 0.71 -0.10 16 33 H -0.27 1.25 7.00 99.48 0.70 1.95 16 34 H 0.16 -2.00 4.81 -2.91 -0.01 -2.01 16 35 H 0.17 -2.40 6.40 -2.91 -0.02 -2.42 16 36 H 0.09 0.16 8.14 -2.39 -0.02 0.14 16 37 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 Total: 0.00 -23.20 314.14 -1.64 -24.84 By element: Atomic # 1 Polarization: -12.46 SS G_CDS: -0.78 Total: -13.24 kcal Atomic # 6 Polarization: 5.08 SS G_CDS: 3.46 Total: 8.54 kcal Atomic # 7 Polarization: 1.55 SS G_CDS: -2.31 Total: -0.76 kcal Atomic # 8 Polarization: -12.39 SS G_CDS: -4.05 Total: -16.44 kcal Atomic # 14 Polarization: -4.99 SS G_CDS: 2.05 Total: -2.94 kcal Total: -23.20 -1.64 -24.84 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_13422076.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.527 kcal (2) G-P(sol) polarization free energy of solvation -23.198 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.725 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.641 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.839 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.366 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds