Wall clock time and date at job start Sat Mar 6 2021 21:11:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42902 * 113.99899 * 2 1 4 4 H 1.08998 * 112.84753 * 18.80577 * 3 2 1 5 5 C 1.53777 * 113.61184 * 150.00184 * 3 2 1 6 6 C 1.53784 * 87.08313 * 89.11644 * 5 3 2 7 7 H 1.08999 * 113.61137 * 270.79363 * 6 5 3 8 8 N 1.46503 * 113.61375 * 139.97914 * 6 5 3 9 9 C 1.34772 * 119.99712 * 154.99753 * 8 6 5 10 10 O 1.21592 * 120.00559 * 0.02562 * 9 8 6 11 11 C 1.47525 * 119.99809 * 179.97438 * 9 8 6 12 12 C 1.39773 * 120.06718 * 180.02562 * 11 9 8 13 13 C 1.37633 * 119.93025 * 179.97438 * 12 11 9 14 14 C 1.50697 * 119.96575 * 180.02562 * 13 12 11 15 15 O 1.42905 * 109.46908 * 255.01763 * 14 13 12 16 16 Si 1.86299 * 109.47352 * 15.01688 * 14 13 12 17 17 C 1.39191 * 120.06635 * 0.02562 * 13 12 11 18 18 N 1.39055 * 119.93184 * 179.97438 * 17 13 12 19 19 C 1.46901 * 110.99854 * 240.00353 * 18 17 13 20 20 C 1.46898 * 110.99970 * 116.04517 * 18 17 13 21 21 C 1.39239 * 120.14251 * 0.25580 * 17 13 12 22 22 C 1.37593 * 120.06312 * 359.44832 * 21 17 13 23 23 C 1.53776 * 87.08049 * 25.43110 * 6 5 3 24 24 H 1.09002 * 109.46928 * 60.00077 * 1 2 3 25 25 H 1.09001 * 109.47099 * 179.97438 * 1 2 3 26 26 H 1.08995 * 109.47230 * 299.99995 * 1 2 3 27 27 H 1.08996 * 113.61856 * 334.56328 * 5 3 2 28 28 H 1.09004 * 113.61406 * 203.66737 * 5 3 2 29 29 H 0.97000 * 119.99611 * 335.00024 * 8 6 5 30 30 H 1.07999 * 120.03740 * 359.95644 * 12 11 9 31 31 H 1.09003 * 109.47243 * 135.01424 * 14 13 12 32 32 H 0.96696 * 113.99921 * 299.99835 * 15 14 13 33 33 H 1.48499 * 110.00070 * 298.68484 * 16 14 13 34 34 H 1.48500 * 109.99905 * 59.99850 * 16 14 13 35 35 H 1.09002 * 109.47401 * 59.99571 * 19 18 17 36 36 H 1.09001 * 109.46874 * 299.99584 * 19 18 17 37 37 H 1.09004 * 109.46970 * 179.97438 * 19 18 17 38 38 H 1.09006 * 109.46770 * 179.97438 * 20 18 17 39 39 H 1.09001 * 109.47456 * 300.00115 * 20 18 17 40 40 H 1.09000 * 109.46814 * 60.00421 * 20 18 17 41 41 H 1.08002 * 119.96976 * 179.72444 * 21 17 13 42 42 H 1.08003 * 120.02921 * 180.27185 * 22 21 17 43 43 H 1.08999 * 113.61723 * 89.11545 * 23 6 5 44 44 H 1.08996 * 113.61716 * 220.01923 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0788 0.3238 5 6 3.3755 1.3719 0.7045 6 6 4.0061 1.0330 -0.6566 7 1 4.1098 -0.0372 -0.8354 8 7 5.2364 1.7782 -0.9352 9 6 6.1522 1.2732 -1.7852 10 8 5.9573 0.1994 -2.3213 11 6 7.3907 2.0238 -2.0662 12 6 8.3413 1.5016 -2.9479 13 6 9.4955 2.2045 -3.2084 14 6 10.5206 1.6426 -4.1594 15 8 11.6354 1.1435 -3.4176 16 14 9.7598 0.2566 -5.1447 17 6 9.7170 3.4339 -2.5944 18 7 10.8844 4.1414 -2.8592 19 6 11.6590 4.3581 -1.6299 20 6 10.5876 5.4162 -3.5260 21 6 8.7747 3.9540 -1.7110 22 6 7.6161 3.2590 -1.4512 23 6 2.7535 1.6489 -1.3018 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8899 27 1 3.5170 0.5958 1.4566 28 1 3.6311 2.3670 1.0685 29 1 5.3917 2.6350 -0.5077 30 1 8.1703 0.5475 -3.4241 31 1 10.8569 2.4277 -4.8366 32 1 12.0813 1.8123 -2.8800 33 1 9.3259 -0.8343 -4.2354 34 1 8.5992 0.7627 -5.9207 35 1 11.9251 3.3953 -1.1937 36 1 11.0598 4.9262 -0.9183 37 1 12.5670 4.9132 -1.8657 38 1 11.5181 5.9495 -3.7211 39 1 10.0749 5.2227 -4.4682 40 1 9.9496 6.0226 -2.8830 41 1 8.9515 4.9061 -1.2327 42 1 6.8836 3.6650 -0.7692 43 1 2.8389 2.7197 -1.4863 44 1 2.3927 1.0964 -2.1693 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_13422196.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:11:56 Heat of formation + Delta-G solvation = -36.021471 kcal Electronic energy + Delta-G solvation = -25538.365382 eV Core-core repulsion = 21844.965221 eV Total energy + Delta-G solvation = -3693.400161 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.162 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.82159 -41.02117 -39.80033 -37.72193 -37.32218 -37.06588 -34.35603 -32.69574 -31.33227 -28.79065 -27.80859 -26.94864 -26.85742 -26.57489 -24.94633 -23.24092 -22.94163 -21.26581 -20.89427 -19.07318 -18.33201 -17.86146 -17.77027 -17.21972 -16.81608 -16.45054 -16.28345 -16.15895 -15.99555 -15.76108 -15.58316 -15.11024 -14.97293 -14.77160 -14.59183 -14.07764 -13.80133 -13.66489 -13.59831 -13.49050 -13.23836 -13.13683 -13.07584 -12.87302 -12.73822 -12.49935 -12.04822 -11.99467 -11.50566 -11.28531 -11.03988 -10.82055 -10.58829 -10.17095 -10.12366 -9.85502 -9.76230 -4.71320 -0.43136 0.08624 1.50230 1.66999 1.80939 2.05470 2.14216 2.57026 2.58116 2.61816 3.37045 3.47081 3.50659 3.56844 3.64307 3.76463 3.85492 3.95755 3.97814 4.06574 4.11705 4.15062 4.22074 4.32181 4.34902 4.37966 4.40049 4.40193 4.50243 4.56889 4.67583 4.70369 4.72826 4.73735 4.75415 4.86747 4.95508 4.96412 4.99947 5.09032 5.16515 5.40951 5.48477 5.57255 6.08204 6.15369 6.41133 6.70476 7.15449 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.368 6.368 3 C 0.066 3.934 4 H 0.082 0.918 5 C -0.148 4.148 6 C 0.129 3.871 7 H 0.122 0.878 8 N -0.717 5.717 9 C 0.559 3.441 10 O -0.530 6.530 11 C -0.133 4.133 12 C -0.055 4.055 13 C -0.097 4.097 14 C -0.066 4.066 15 O -0.533 6.533 16 Si 0.734 3.266 17 C 0.126 3.874 18 N -0.516 5.516 19 C 0.022 3.978 20 C 0.026 3.974 21 C -0.153 4.153 22 C -0.072 4.072 23 C -0.172 4.172 24 H 0.044 0.956 25 H 0.089 0.911 26 H 0.044 0.956 27 H 0.087 0.913 28 H 0.097 0.903 29 H 0.399 0.601 30 H 0.140 0.860 31 H 0.081 0.919 32 H 0.365 0.635 33 H -0.249 1.249 34 H -0.249 1.249 35 H 0.074 0.926 36 H 0.035 0.965 37 H 0.080 0.920 38 H 0.080 0.920 39 H 0.073 0.927 40 H 0.034 0.966 41 H 0.131 0.869 42 H 0.129 0.871 43 H 0.093 0.907 44 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.035 6.791 1.797 7.025 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.287 6.287 3 C 0.007 3.993 4 H 0.100 0.900 5 C -0.186 4.186 6 C 0.025 3.975 7 H 0.140 0.860 8 N -0.368 5.368 9 C 0.347 3.653 10 O -0.407 6.407 11 C -0.136 4.136 12 C -0.074 4.074 13 C -0.098 4.098 14 C -0.175 4.175 15 O -0.338 6.338 16 Si 0.633 3.367 17 C 0.032 3.968 18 N -0.237 5.237 19 C -0.124 4.124 20 C -0.120 4.120 21 C -0.173 4.173 22 C -0.091 4.091 23 C -0.211 4.211 24 H 0.062 0.938 25 H 0.108 0.892 26 H 0.063 0.937 27 H 0.105 0.895 28 H 0.116 0.884 29 H 0.235 0.765 30 H 0.158 0.842 31 H 0.099 0.901 32 H 0.213 0.787 33 H -0.173 1.173 34 H -0.173 1.173 35 H 0.093 0.907 36 H 0.054 0.946 37 H 0.099 0.901 38 H 0.098 0.902 39 H 0.091 0.909 40 H 0.053 0.947 41 H 0.149 0.851 42 H 0.147 0.853 43 H 0.111 0.889 44 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -0.646 4.549 0.664 4.642 hybrid contribution -0.833 2.678 2.018 3.456 sum -1.479 7.227 2.682 7.849 Atomic orbital electron populations 1.22860 0.80331 1.03250 1.00183 1.87909 1.20211 1.26016 1.94522 1.22843 0.94210 0.85850 0.96402 0.89983 1.23629 0.94432 1.03269 0.97279 1.22569 0.81489 0.98252 0.95204 0.85968 1.45914 1.20155 1.24032 1.46705 1.18197 0.82915 0.85229 0.78964 1.90823 1.78071 1.21578 1.50208 1.19913 0.95990 0.96311 1.01373 1.21123 0.91982 0.99145 0.95132 1.20282 0.96220 0.94001 0.99299 1.25126 0.88478 1.07869 0.96009 1.86719 1.44004 1.39147 1.63937 0.93367 0.80821 0.78922 0.83632 1.18819 0.90386 0.93041 0.94601 1.59459 1.17660 1.20799 1.25755 1.22558 0.97864 1.02447 0.89528 1.22500 1.01962 0.88541 0.99014 1.21599 0.94793 1.00946 0.99925 1.21145 0.96999 0.93204 0.97772 1.23995 0.96430 1.01843 0.98813 0.93776 0.89221 0.93722 0.89466 0.88435 0.76487 0.84250 0.90093 0.78717 1.17333 1.17325 0.90727 0.94632 0.90078 0.90166 0.90864 0.94721 0.85115 0.85283 0.88886 0.90054 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.37 -0.73 10.63 -35.23 -0.37 -1.11 16 3 C 0.07 -0.02 4.38 -25.92 -0.11 -0.13 16 4 H 0.08 -0.16 7.87 -51.93 -0.41 -0.57 16 5 C -0.15 0.15 7.66 -25.92 -0.20 -0.05 16 6 C 0.13 0.15 4.17 -67.12 -0.28 -0.13 16 7 H 0.12 0.49 7.46 -51.93 -0.39 0.10 16 8 N -0.72 -0.48 5.30 -54.06 -0.29 -0.76 16 9 C 0.56 2.31 7.76 -12.48 -0.10 2.21 16 10 O -0.53 -4.40 15.94 5.28 0.08 -4.31 16 11 C -0.13 -0.37 5.88 -104.95 -0.62 -0.99 16 12 C -0.05 -0.22 8.19 -39.23 -0.32 -0.55 16 13 C -0.10 -0.25 5.28 -104.49 -0.55 -0.80 16 14 C -0.07 -0.12 2.29 36.00 0.08 -0.04 16 15 O -0.53 -1.30 12.65 -35.23 -0.45 -1.74 16 16 Si 0.73 1.37 30.40 -169.99 -5.17 -3.80 16 17 C 0.13 0.10 4.66 -83.86 -0.39 -0.29 16 18 N -0.52 0.40 3.67 -186.86 -0.69 -0.29 16 19 C 0.02 -0.05 9.20 60.07 0.55 0.50 16 20 C 0.03 -0.05 9.38 60.06 0.56 0.51 16 21 C -0.15 0.05 8.53 -39.44 -0.34 -0.28 16 22 C -0.07 0.02 9.53 -39.23 -0.37 -0.36 16 23 C -0.17 -0.03 7.71 -25.92 -0.20 -0.23 16 24 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 25 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 26 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 27 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.10 -0.32 8.12 -51.93 -0.42 -0.74 16 29 H 0.40 -1.00 6.75 -40.82 -0.28 -1.28 16 30 H 0.14 0.78 4.50 -52.49 -0.24 0.55 16 31 H 0.08 0.06 7.78 -51.93 -0.40 -0.34 16 32 H 0.36 0.15 8.06 45.56 0.37 0.52 16 33 H -0.25 -1.27 6.81 56.52 0.38 -0.88 16 34 H -0.25 -0.87 7.11 56.52 0.40 -0.47 16 35 H 0.07 -0.15 7.84 -51.93 -0.41 -0.56 16 36 H 0.04 -0.09 7.08 -51.93 -0.37 -0.46 16 37 H 0.08 -0.26 8.12 -51.93 -0.42 -0.68 16 38 H 0.08 -0.23 8.12 -51.93 -0.42 -0.65 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.03 -0.08 7.33 -51.93 -0.38 -0.46 16 41 H 0.13 -0.29 6.99 -52.49 -0.37 -0.65 16 42 H 0.13 -0.43 6.39 -52.48 -0.34 -0.77 16 43 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 44 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 LS Contribution 357.38 15.07 5.39 5.39 Total: 0.00 -7.49 357.38 -9.32 -16.81 By element: Atomic # 1 Polarization: -4.01 SS G_CDS: -6.64 Total: -10.65 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -1.18 Total: 0.47 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.97 Total: -1.05 kcal Atomic # 8 Polarization: -6.42 SS G_CDS: -0.74 Total: -7.16 kcal Atomic # 14 Polarization: 1.37 SS G_CDS: -5.17 Total: -3.80 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -7.49 -9.32 -16.81 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_13422196.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.213 kcal (2) G-P(sol) polarization free energy of solvation -7.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.705 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.316 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.809 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.021 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds