Wall clock time and date at job start Sat Mar 6 2021 21:12:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42901 * 114.00273 * 2 1 4 4 H 1.09006 * 112.84459 * 18.80567 * 3 2 1 5 5 C 1.53776 * 113.61757 * 149.99772 * 3 2 1 6 6 C 1.53787 * 87.07770 * 89.11832 * 5 3 2 7 7 H 1.09001 * 113.61553 * 270.80256 * 6 5 3 8 8 N 1.46504 * 113.61059 * 139.98301 * 6 5 3 9 9 C 1.34781 * 119.99604 * 154.99831 * 8 6 5 10 10 O 1.21648 * 120.00043 * 0.02562 * 9 8 6 11 11 C 1.47041 * 119.99733 * 179.97438 * 9 8 6 12 12 C 1.36226 * 123.49387 * 180.20756 * 11 9 8 13 13 Cl 1.73597 * 124.60181 * 359.97438 * 12 11 9 14 14 S 1.70443 * 110.78833 * 180.29361 * 12 11 9 15 15 C 1.75494 * 92.46851 * 359.72241 * 14 12 11 16 16 C 1.50697 * 124.68523 * 180.02562 * 15 14 12 17 17 O 1.42902 * 109.47450 * 244.96029 * 16 15 14 18 18 Si 1.86302 * 109.47070 * 4.96074 * 16 15 14 19 19 C 1.32695 * 110.62754 * 359.97438 * 15 14 12 20 20 C 1.53777 * 87.08156 * 25.43355 * 6 5 3 21 21 H 1.08994 * 109.47057 * 299.99868 * 1 2 3 22 22 H 1.09001 * 109.47074 * 60.00145 * 1 2 3 23 23 H 1.08994 * 109.47491 * 179.97438 * 1 2 3 24 24 H 1.09005 * 113.61203 * 334.57582 * 5 3 2 25 25 H 1.08996 * 113.61947 * 203.66437 * 5 3 2 26 26 H 0.97002 * 120.00135 * 334.99944 * 8 6 5 27 27 H 1.09003 * 109.47157 * 124.96090 * 16 15 14 28 28 H 0.96694 * 114.00219 * 179.97438 * 17 16 15 29 29 H 1.48504 * 109.99892 * 178.67882 * 18 16 15 30 30 H 1.48500 * 110.00042 * 299.99693 * 18 16 15 31 31 H 1.08002 * 123.44619 * 179.97438 * 19 15 14 32 32 H 1.09000 * 113.61193 * 89.11320 * 20 6 5 33 33 H 1.08996 * 113.61628 * 220.01506 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0789 0.3238 5 6 3.3756 1.3719 0.7045 6 6 4.0061 1.0330 -0.6566 7 1 4.1097 -0.0372 -0.8355 8 7 5.2364 1.7782 -0.9351 9 6 6.1522 1.2731 -1.7852 10 8 5.9571 0.1988 -2.3216 11 6 7.3867 2.0212 -2.0653 12 6 8.3568 1.5804 -2.9141 13 17 8.2938 0.0833 -3.7907 14 16 9.6446 2.6942 -2.9917 15 6 8.8654 3.7894 -1.8634 16 6 9.4452 5.1020 -1.4032 17 8 9.7172 5.0376 -0.0018 18 14 11.0268 5.4404 -2.3279 19 6 7.6946 3.3025 -1.4722 20 6 2.7534 1.6489 -1.3018 21 1 -0.3633 0.5138 0.8900 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3634 -1.0276 -0.0005 24 1 3.5170 0.5956 1.4566 25 1 3.6312 2.3670 1.0685 26 1 5.3918 2.6350 -0.5077 27 1 8.7318 5.9027 -1.5984 28 1 10.0935 5.8499 0.3636 29 1 11.5920 6.7474 -1.9062 30 1 12.0079 4.3559 -2.0700 31 1 7.0413 3.8093 -0.7773 32 1 2.8390 2.7197 -1.4862 33 1 2.3927 1.0964 -2.1693 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_13431040.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:12:02 Heat of formation + Delta-G solvation = -45.111585 kcal Electronic energy + Delta-G solvation = -20088.386893 eV Core-core repulsion = 16655.983777 eV Total energy + Delta-G solvation = -3432.403116 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.037 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.29880 -40.08584 -38.80713 -37.89097 -37.16159 -36.96024 -33.97784 -31.79884 -27.82665 -27.01739 -26.78535 -26.46116 -24.23916 -22.03354 -20.98548 -20.50060 -19.21859 -18.72778 -18.26719 -17.47177 -16.83830 -16.67347 -16.26601 -16.23464 -15.86606 -15.61663 -15.13560 -14.76974 -14.47398 -14.40238 -14.22907 -14.07245 -13.51599 -13.35845 -13.16233 -13.07441 -12.58415 -12.45031 -12.38637 -12.04910 -11.97137 -11.89680 -11.42729 -10.81465 -10.62451 -10.52510 -10.01136 -9.82917 -9.62586 -5.22576 -0.54240 -0.16556 0.47400 0.73727 1.03012 1.14880 1.40093 1.75104 2.26575 2.33778 2.62972 3.02915 3.43542 3.47979 3.57773 3.82112 3.90757 3.91771 4.04130 4.12836 4.28153 4.41068 4.44372 4.46199 4.58024 4.70582 4.74783 4.78858 4.93715 4.95314 5.03515 5.11673 5.55418 6.19420 6.20793 6.53075 7.28930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.368 6.368 3 C 0.065 3.935 4 H 0.081 0.919 5 C -0.148 4.148 6 C 0.132 3.868 7 H 0.122 0.878 8 N -0.716 5.716 9 C 0.577 3.423 10 O -0.516 6.516 11 C -0.159 4.159 12 C -0.116 4.116 13 Cl 0.027 6.973 14 S 0.245 5.755 15 C -0.190 4.190 16 C -0.033 4.033 17 O -0.531 6.531 18 Si 0.641 3.359 19 C -0.071 4.071 20 C -0.171 4.171 21 H 0.044 0.956 22 H 0.043 0.957 23 H 0.089 0.911 24 H 0.086 0.914 25 H 0.097 0.903 26 H 0.399 0.601 27 H 0.091 0.909 28 H 0.385 0.615 29 H -0.234 1.234 30 H -0.231 1.231 31 H 0.156 0.844 32 H 0.093 0.907 33 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.943 7.367 0.705 7.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.287 6.287 3 C 0.006 3.994 4 H 0.099 0.901 5 C -0.187 4.187 6 C 0.028 3.972 7 H 0.140 0.860 8 N -0.367 5.367 9 C 0.362 3.638 10 O -0.392 6.392 11 C -0.177 4.177 12 C -0.263 4.263 13 Cl 0.056 6.944 14 S 0.510 5.490 15 C -0.307 4.307 16 C -0.145 4.145 17 O -0.340 6.340 18 Si 0.539 3.461 19 C -0.101 4.101 20 C -0.210 4.210 21 H 0.062 0.938 22 H 0.062 0.938 23 H 0.107 0.893 24 H 0.104 0.896 25 H 0.116 0.884 26 H 0.234 0.766 27 H 0.109 0.891 28 H 0.234 0.766 29 H -0.157 1.157 30 H -0.155 1.155 31 H 0.173 0.827 32 H 0.111 0.889 33 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 1.027 5.835 -0.573 5.953 hybrid contribution -1.581 0.941 2.036 2.744 sum -0.554 6.777 1.463 6.955 Atomic orbital electron populations 1.22850 0.80409 1.03191 1.00155 1.87907 1.20136 1.26087 1.94533 1.22854 0.94217 0.85768 0.96539 0.90077 1.23632 0.94401 1.03255 0.97367 1.22524 0.81486 0.98205 0.95008 0.86003 1.45835 1.20052 1.24035 1.46783 1.17426 0.82111 0.85007 0.79247 1.90879 1.77639 1.20954 1.49772 1.20220 0.97498 0.97199 1.02825 1.25516 1.01697 0.97028 1.02067 1.98440 1.97654 1.26163 1.72110 1.83335 1.16629 1.07950 1.41081 1.23499 0.99439 1.01558 1.06156 1.23993 1.08695 0.94762 0.87072 1.86603 1.85064 1.42164 1.20132 0.95246 0.77623 0.83192 0.89992 1.20968 0.96562 0.93087 0.99439 1.23989 0.96483 1.01849 0.98695 0.93768 0.93789 0.89282 0.89568 0.88437 0.76564 0.89124 0.76634 1.15669 1.15474 0.82681 0.88886 0.90102 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.37 -0.73 10.63 -35.23 -0.37 -1.11 16 3 C 0.07 -0.02 4.37 -25.92 -0.11 -0.13 16 4 H 0.08 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.15 0.14 7.66 -25.92 -0.20 -0.06 16 6 C 0.13 0.14 4.17 -67.11 -0.28 -0.14 16 7 H 0.12 0.46 7.46 -51.93 -0.39 0.07 16 8 N -0.72 -0.40 5.33 -54.21 -0.29 -0.69 16 9 C 0.58 2.11 7.79 -12.69 -0.10 2.01 16 10 O -0.52 -3.72 14.51 5.23 0.08 -3.64 16 11 C -0.16 -0.37 5.98 -104.58 -0.63 -0.99 16 12 C -0.12 -0.32 6.87 30.01 0.21 -0.11 16 13 Cl 0.03 0.11 27.20 -51.86 -1.41 -1.30 16 14 S 0.25 0.06 20.19 -107.50 -2.17 -2.11 16 15 C -0.19 0.06 5.69 -36.20 -0.21 -0.15 16 16 C -0.03 0.07 2.93 36.00 0.11 0.18 16 17 O -0.53 0.57 12.86 -35.23 -0.45 0.11 16 18 Si 0.64 -1.48 30.92 -169.99 -5.26 -6.73 16 19 C -0.07 0.01 9.75 -39.00 -0.38 -0.37 16 20 C -0.17 -0.01 7.71 -25.92 -0.20 -0.21 16 21 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 23 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 24 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 25 H 0.10 -0.30 8.12 -51.93 -0.42 -0.72 16 26 H 0.40 -0.93 7.27 -40.82 -0.30 -1.23 16 27 H 0.09 -0.39 7.96 -51.93 -0.41 -0.81 16 28 H 0.38 -1.96 8.74 45.56 0.40 -1.56 16 29 H -0.23 0.21 7.11 56.52 0.40 0.61 16 30 H -0.23 -0.15 7.11 56.52 0.40 0.26 16 31 H 0.16 -0.41 7.10 -52.49 -0.37 -0.78 16 32 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 33 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 LS Contribution 313.00 15.07 4.72 4.72 Total: 0.00 -7.65 313.00 -9.49 -17.14 By element: Atomic # 1 Polarization: -3.87 SS G_CDS: -3.64 Total: -7.50 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -0.69 Total: 1.11 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -0.29 Total: -0.69 kcal Atomic # 8 Polarization: -3.88 SS G_CDS: -0.75 Total: -4.63 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.26 Total: -6.73 kcal Atomic # 16 Polarization: 0.06 SS G_CDS: -2.17 Total: -2.11 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -1.41 Total: -1.30 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -7.65 -9.49 -17.14 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_13431040.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.967 kcal (2) G-P(sol) polarization free energy of solvation -7.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.621 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.144 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.112 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds