Wall clock time and date at job start Sat Mar 6 2021 21:12:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42900 * 114.00552 * 2 1 4 4 H 1.09008 * 112.84391 * 18.81040 * 3 2 1 5 5 C 1.53778 * 113.61628 * 149.99665 * 3 2 1 6 6 C 1.53788 * 87.07752 * 89.12261 * 5 3 2 7 7 H 1.08997 * 113.60983 * 270.79908 * 6 5 3 8 8 N 1.46496 * 113.61393 * 139.98432 * 6 5 3 9 9 C 1.34775 * 120.00321 * 156.52749 * 8 6 5 10 10 O 1.21616 * 119.99987 * 0.02562 * 9 8 6 11 11 C 1.47376 * 120.00301 * 179.97438 * 9 8 6 12 12 C 1.36415 * 127.19220 * 0.02818 * 11 9 8 13 13 O 1.33650 * 108.39814 * 179.97438 * 12 11 9 14 14 C 1.34214 * 110.90755 * 359.97438 * 13 12 11 15 15 C 1.50704 * 125.43622 * 179.73898 * 14 13 12 16 16 O 1.42905 * 109.47013 * 120.02765 * 15 14 13 17 17 Si 1.86301 * 109.47278 * 0.02562 * 15 14 13 18 18 C 1.34179 * 109.12411 * 0.02562 * 14 13 12 19 19 C 1.53777 * 87.17361 * 25.39015 * 6 5 3 20 20 H 1.08992 * 109.47753 * 179.97438 * 1 2 3 21 21 H 1.09002 * 109.46945 * 299.99813 * 1 2 3 22 22 H 1.09007 * 109.47023 * 59.99126 * 1 2 3 23 23 H 1.09001 * 113.61952 * 334.57962 * 5 3 2 24 24 H 1.09004 * 113.69280 * 203.67949 * 5 3 2 25 25 H 0.97002 * 120.00324 * 336.52272 * 8 6 5 26 26 H 1.07998 * 125.80029 * 359.95521 * 12 11 9 27 27 H 1.08998 * 109.46839 * 240.02231 * 15 14 13 28 28 H 0.96699 * 113.99853 * 299.99567 * 16 15 14 29 29 H 1.48497 * 109.99983 * 58.68224 * 17 15 14 30 30 H 1.48501 * 109.99993 * 180.02562 * 17 15 14 31 31 H 1.08005 * 127.02000 * 179.97438 * 18 14 13 32 32 H 1.09006 * 113.61223 * 89.15468 * 19 6 5 33 33 H 1.08997 * 113.61757 * 220.05822 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0789 0.3239 5 6 3.3756 1.3718 0.7046 6 6 4.0061 1.0330 -0.6566 7 1 4.1097 -0.0372 -0.8354 8 7 5.2364 1.7780 -0.9351 9 6 6.1380 1.2877 -1.8087 10 8 5.9301 0.2271 -2.3661 11 6 7.3754 2.0375 -2.0893 12 6 7.7553 3.2325 -1.5520 13 8 8.9416 3.5686 -2.0676 14 6 9.3692 2.6363 -2.9333 15 6 10.6623 2.6885 -3.7055 16 8 11.4645 1.5550 -3.3684 17 14 11.5812 4.2504 -3.2733 18 6 8.4586 1.6535 -3.0060 19 6 2.7539 1.6474 -1.3040 20 1 -0.3634 -1.0276 -0.0005 21 1 -0.3633 0.5138 0.8900 22 1 -0.3633 0.5140 -0.8900 23 1 3.5171 0.5955 1.4566 24 1 3.6323 2.3664 1.0693 25 1 5.4021 2.6242 -0.4908 26 1 7.1929 3.8090 -0.8326 27 1 10.4479 2.6769 -4.7742 28 1 11.6943 1.5007 -2.4306 29 1 11.8515 4.2933 -1.8138 30 1 12.8580 4.3141 -4.0289 31 1 8.5109 0.7623 -3.6140 32 1 2.8392 2.7180 -1.4900 33 1 2.3941 1.0934 -2.1710 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_13456056.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:12:04 Heat of formation + Delta-G solvation = -58.566182 kcal Electronic energy + Delta-G solvation = -18344.159518 eV Core-core repulsion = 15146.902080 eV Total energy + Delta-G solvation = -3197.257438 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 254.103 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -43.72226 -41.14884 -39.63700 -38.16639 -37.11302 -34.44233 -33.59744 -31.72767 -27.80497 -26.91362 -26.79533 -25.94308 -23.97597 -22.26856 -21.18721 -20.69890 -19.35076 -18.20593 -17.72749 -17.56019 -17.30675 -16.92815 -16.37073 -16.24249 -15.90761 -15.84516 -15.49535 -14.77619 -14.64017 -14.16255 -13.93873 -13.62255 -13.56745 -13.42348 -13.17375 -12.96129 -12.48419 -12.09792 -12.03214 -11.49214 -11.02455 -10.89807 -10.75490 -10.57343 -10.06712 -9.80697 -5.01727 0.22905 0.88575 1.12040 1.46263 1.69557 1.90619 2.10313 2.35935 2.58675 3.11623 3.34417 3.42358 3.52634 3.58499 3.77338 3.91463 3.99252 4.21281 4.29841 4.37442 4.41335 4.41981 4.52104 4.58929 4.70765 4.74128 4.77888 4.89114 4.98818 5.05480 5.22461 5.47675 5.81496 6.16797 6.22018 6.46351 7.23530 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.369 6.369 3 C 0.065 3.935 4 H 0.082 0.918 5 C -0.148 4.148 6 C 0.132 3.868 7 H 0.121 0.879 8 N -0.720 5.720 9 C 0.588 3.412 10 O -0.529 6.529 11 C -0.237 4.237 12 C 0.031 3.969 13 O -0.166 6.166 14 C -0.057 4.057 15 C -0.035 4.035 16 O -0.520 6.520 17 Si 0.705 3.295 18 C -0.123 4.123 19 C -0.172 4.172 20 H 0.089 0.911 21 H 0.044 0.956 22 H 0.044 0.956 23 H 0.086 0.914 24 H 0.098 0.902 25 H 0.397 0.603 26 H 0.214 0.786 27 H 0.138 0.862 28 H 0.381 0.619 29 H -0.256 1.256 30 H -0.249 1.249 31 H 0.162 0.838 32 H 0.093 0.907 33 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.414 6.474 2.714 7.423 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.287 6.287 3 C 0.006 3.994 4 H 0.100 0.900 5 C -0.186 4.186 6 C 0.027 3.973 7 H 0.139 0.861 8 N -0.371 5.371 9 C 0.375 3.625 10 O -0.406 6.406 11 C -0.242 4.242 12 C -0.040 4.040 13 O -0.062 6.062 14 C -0.105 4.105 15 C -0.145 4.145 16 O -0.326 6.326 17 Si 0.604 3.396 18 C -0.143 4.143 19 C -0.211 4.211 20 H 0.107 0.893 21 H 0.063 0.937 22 H 0.062 0.938 23 H 0.105 0.895 24 H 0.116 0.884 25 H 0.232 0.768 26 H 0.230 0.770 27 H 0.155 0.845 28 H 0.229 0.771 29 H -0.181 1.181 30 H -0.173 1.173 31 H 0.180 0.820 32 H 0.112 0.888 33 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -1.594 5.989 2.060 6.531 hybrid contribution -0.224 -0.481 0.943 1.082 sum -1.818 5.509 3.004 6.532 Atomic orbital electron populations 1.22857 0.80342 1.03232 1.00185 1.87904 1.20200 1.26071 1.94525 1.22888 0.94206 0.85822 0.96450 0.89995 1.23622 0.94450 1.03268 0.97248 1.22531 0.81477 0.98169 0.95115 0.86110 1.45848 1.20810 1.25162 1.45236 1.17310 0.81730 0.84596 0.78831 1.90828 1.77422 1.22296 1.50017 1.21558 0.98746 0.98230 1.05650 1.24458 0.85301 0.95843 0.98352 1.83682 1.31757 1.43993 1.46726 1.22680 0.99860 0.90495 0.97494 1.24389 0.88299 1.00521 1.01272 1.86682 1.69852 1.44572 1.31515 0.94452 0.82316 0.81323 0.81484 1.22551 0.91329 1.00389 1.00010 1.24025 0.96436 1.01871 0.98731 0.89250 0.93736 0.93762 0.89527 0.88387 0.76815 0.76984 0.84496 0.77093 1.18059 1.17349 0.82025 0.88849 0.90069 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.60 10.63 -35.23 -0.37 -0.97 16 3 C 0.07 -0.05 4.38 -25.83 -0.11 -0.16 16 4 H 0.08 -0.19 7.87 -51.92 -0.41 -0.60 16 5 C -0.15 0.25 7.66 -25.92 -0.20 0.05 16 6 C 0.13 0.06 4.15 -67.12 -0.28 -0.22 16 7 H 0.12 0.41 7.50 -51.93 -0.39 0.02 16 8 N -0.72 0.35 5.35 -54.11 -0.29 0.06 16 9 C 0.59 1.81 7.81 -12.54 -0.10 1.71 16 10 O -0.53 -4.06 16.60 5.26 0.09 -3.97 16 11 C -0.24 -0.33 6.31 -103.28 -0.65 -0.98 16 12 C 0.03 -0.06 11.61 30.08 0.35 0.29 16 13 O -0.17 0.08 8.89 7.66 0.07 0.15 16 14 C -0.06 -0.02 6.20 -35.74 -0.22 -0.24 16 15 C -0.04 0.03 2.97 36.01 0.11 0.13 16 16 O -0.52 -0.36 12.87 -35.23 -0.45 -0.81 16 17 Si 0.71 -1.07 32.09 -169.99 -5.45 -6.52 16 18 C -0.12 -0.27 10.88 -37.46 -0.41 -0.67 16 19 C -0.17 0.07 7.72 -25.83 -0.20 -0.13 16 20 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 21 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 22 H 0.04 -0.07 8.14 -51.92 -0.42 -0.49 16 23 H 0.09 -0.07 8.14 -51.93 -0.42 -0.50 16 24 H 0.10 -0.40 8.11 -51.93 -0.42 -0.82 16 25 H 0.40 -1.64 7.68 -40.82 -0.31 -1.95 16 26 H 0.21 -1.39 7.47 -52.49 -0.39 -1.79 16 27 H 0.14 -0.27 7.96 -51.93 -0.41 -0.68 16 28 H 0.38 -0.83 8.70 45.56 0.40 -0.43 16 29 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 30 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 31 H 0.16 0.45 8.06 -52.48 -0.42 0.03 16 32 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 33 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 LS Contribution 293.39 15.07 4.42 4.42 Total: 0.00 -9.06 293.39 -6.71 -15.77 By element: Atomic # 1 Polarization: -4.87 SS G_CDS: -4.10 Total: -8.97 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -0.62 Total: 0.84 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.29 Total: 0.06 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -0.67 Total: -5.60 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.45 Total: -6.52 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -9.06 -6.71 -15.77 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_13456056.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.796 kcal (2) G-P(sol) polarization free energy of solvation -9.060 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.856 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.710 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.770 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds