Wall clock time and date at job start Sat Mar 6 2021 21:12:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42898 * 113.99979 * 2 1 4 4 H 1.08998 * 112.85036 * 341.19151 * 3 2 1 5 5 C 1.53781 * 113.61553 * 112.49990 * 3 2 1 6 6 C 1.53781 * 87.08013 * 89.11440 * 5 3 2 7 7 H 1.09001 * 113.68996 * 270.86936 * 6 5 3 8 8 N 1.46499 * 113.61217 * 139.98181 * 6 5 3 9 9 C 1.34777 * 120.00082 * 107.50514 * 8 6 5 10 10 O 1.21276 * 120.00128 * 359.97438 * 9 8 6 11 11 C 1.50699 * 120.00070 * 179.97438 * 9 8 6 12 12 C 1.50701 * 109.47462 * 179.97438 * 11 9 8 13 13 C 1.34854 * 125.88812 * 85.01960 * 12 11 9 14 14 C 1.40889 * 107.41668 * 180.02562 * 13 12 11 15 15 C 1.34849 * 107.41497 * 0.02562 * 14 13 12 16 16 C 1.50711 * 125.88778 * 179.97438 * 15 14 13 17 17 O 1.42896 * 109.46769 * 245.02230 * 16 15 14 18 18 Si 1.86295 * 109.46932 * 5.02094 * 16 15 14 19 19 N 1.36340 * 125.89141 * 264.72269 * 12 11 9 20 20 C 1.53773 * 87.08161 * 25.43482 * 6 5 3 21 21 H 1.09002 * 109.47382 * 300.00227 * 1 2 3 22 22 H 1.09001 * 109.46938 * 180.02562 * 1 2 3 23 23 H 1.09004 * 109.46926 * 60.00334 * 1 2 3 24 24 H 1.09001 * 113.61476 * 203.66452 * 5 3 2 25 25 H 1.09000 * 113.61379 * 334.56566 * 5 3 2 26 26 H 0.97005 * 120.00101 * 287.50429 * 8 6 5 27 27 H 1.09002 * 109.47501 * 299.99886 * 11 9 8 28 28 H 1.09006 * 109.47548 * 59.99852 * 11 9 8 29 29 H 1.07998 * 126.28967 * 0.03309 * 13 12 11 30 30 H 1.07999 * 126.29296 * 180.02562 * 14 13 12 31 31 H 1.08999 * 109.47128 * 125.02705 * 16 15 14 32 32 H 0.96702 * 113.99892 * 179.97438 * 17 16 15 33 33 H 1.48504 * 109.99596 * 178.67765 * 18 16 15 34 34 H 1.48493 * 110.00348 * 300.00075 * 18 16 15 35 35 H 0.96999 * 125.63374 * 359.97438 * 19 12 11 36 36 H 1.09005 * 113.61224 * 220.02018 * 20 6 5 37 37 H 1.09001 * 113.61735 * 89.11388 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7534 1.6489 1.3018 6 6 4.0061 1.0330 0.6566 7 1 4.1097 -0.0372 0.8356 8 7 5.2363 1.7781 0.9352 9 6 6.1521 1.2731 1.7854 10 8 5.9577 0.2021 2.3201 11 6 7.4178 2.0393 2.0716 12 6 8.2654 1.2633 3.0465 13 6 9.1370 0.2838 2.7311 14 6 9.7136 -0.1709 3.9335 15 6 9.1720 0.5477 4.9379 16 6 9.4943 0.4011 6.4028 17 8 8.3361 -0.0596 7.1015 18 14 10.8773 -0.8290 6.6141 19 7 8.2874 1.4343 4.3990 20 6 3.3756 1.3719 -0.7044 21 1 -0.3634 0.5139 0.8900 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5138 -0.8901 24 1 2.8389 2.7198 1.4862 25 1 2.3926 1.0964 2.1693 26 1 5.3917 2.6350 0.5079 27 1 7.9718 2.1854 1.1442 28 1 7.1664 3.0091 2.5011 29 1 9.3533 -0.0843 1.7391 30 1 10.4534 -0.9514 4.0326 31 1 9.8016 1.3662 6.8056 32 1 8.4709 -0.1773 8.0518 33 1 11.2262 -0.9589 8.0518 34 1 10.4708 -2.1491 6.0689 35 1 7.7587 2.0781 4.8959 36 1 3.5171 0.5956 -1.4565 37 1 3.6312 2.3670 -1.0684 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_14644196.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:12:08 Heat of formation + Delta-G solvation = -39.094859 kcal Electronic energy + Delta-G solvation = -19967.214113 eV Core-core repulsion = 16712.982059 eV Total energy + Delta-G solvation = -3254.232055 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.32898 -41.16563 -39.79798 -37.87639 -37.16650 -34.28077 -32.95923 -31.95328 -29.56045 -27.67286 -26.76599 -25.79694 -24.57260 -21.95536 -21.35828 -21.17475 -20.75031 -18.65184 -18.40340 -18.11931 -17.80315 -16.92128 -16.48149 -16.11963 -16.02210 -15.91613 -15.16528 -15.01452 -14.80649 -14.60811 -14.39007 -14.02107 -13.70191 -13.48194 -13.39492 -13.33280 -13.14252 -12.89744 -12.45692 -12.43195 -12.02697 -11.96565 -11.45184 -10.97304 -10.62418 -10.56161 -10.05855 -9.81413 -8.96747 -4.89288 1.03706 1.28798 1.59743 1.61232 1.83897 1.99456 2.31955 2.50347 2.67370 3.38538 3.46079 3.56981 3.67243 3.79625 3.90478 4.03617 4.06668 4.22104 4.28062 4.31189 4.47151 4.47915 4.50565 4.62417 4.66431 4.77739 4.79939 4.80316 4.94615 4.99779 5.03654 5.22740 5.29299 5.51281 5.99086 6.11282 6.23377 6.51114 6.55345 6.68032 7.28311 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.401 6.401 3 C 0.059 3.941 4 H 0.104 0.896 5 C -0.168 4.168 6 C 0.121 3.879 7 H 0.077 0.923 8 N -0.705 5.705 9 C 0.507 3.493 10 O -0.585 6.585 11 C -0.064 4.064 12 C 0.034 3.966 13 C -0.201 4.201 14 C -0.205 4.205 15 C 0.018 3.982 16 C -0.065 4.065 17 O -0.567 6.567 18 Si 0.794 3.206 19 N -0.538 5.538 20 C -0.132 4.132 21 H 0.048 0.952 22 H 0.089 0.911 23 H 0.059 0.941 24 H 0.116 0.884 25 H 0.052 0.948 26 H 0.421 0.579 27 H 0.149 0.851 28 H 0.133 0.867 29 H 0.143 0.857 30 H 0.147 0.853 31 H 0.098 0.902 32 H 0.396 0.604 33 H -0.277 1.277 34 H -0.309 1.309 35 H 0.419 0.581 36 H 0.075 0.925 37 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.623 9.364 -2.827 9.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.320 6.320 3 C 0.001 3.999 4 H 0.122 0.878 5 C -0.206 4.206 6 C 0.015 3.985 7 H 0.095 0.905 8 N -0.358 5.358 9 C 0.294 3.706 10 O -0.464 6.464 11 C -0.104 4.104 12 C -0.080 4.080 13 C -0.226 4.226 14 C -0.230 4.230 15 C -0.095 4.095 16 C -0.173 4.173 17 O -0.377 6.377 18 Si 0.698 3.302 19 N -0.133 5.133 20 C -0.170 4.170 21 H 0.066 0.934 22 H 0.108 0.892 23 H 0.077 0.923 24 H 0.135 0.865 25 H 0.071 0.929 26 H 0.260 0.740 27 H 0.166 0.834 28 H 0.151 0.849 29 H 0.161 0.839 30 H 0.164 0.836 31 H 0.116 0.884 32 H 0.247 0.753 33 H -0.203 1.203 34 H -0.237 1.237 35 H 0.257 0.743 36 H 0.094 0.906 37 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 0.508 7.837 -2.597 8.272 hybrid contribution -1.461 0.233 1.136 1.865 sum -0.953 8.070 -1.462 8.257 Atomic orbital electron populations 1.22976 0.79354 1.03647 1.01054 1.87874 1.21554 1.27879 1.94685 1.23045 0.95100 0.85442 0.96343 0.87787 1.23998 0.96115 1.02624 0.97912 1.22340 0.82768 0.96338 0.97009 0.90528 1.45850 1.19132 1.24542 1.46265 1.21222 0.85480 0.85702 0.78194 1.90773 1.79120 1.24575 1.51905 1.20272 0.91323 0.98399 1.00406 1.19949 1.02257 1.02449 0.83367 1.20852 1.02176 1.00538 0.99014 1.20878 1.05937 1.03643 0.92548 1.19889 0.98866 0.97109 0.93672 1.24744 0.96553 1.07881 0.88137 1.86585 1.35724 1.89191 1.26211 0.93545 0.81715 0.75457 0.79474 1.41862 1.34145 1.30799 1.06495 1.23621 0.93106 1.04653 0.95648 0.93351 0.89238 0.92290 0.86544 0.92913 0.74035 0.83361 0.84881 0.83939 0.83554 0.88441 0.75296 1.20324 1.23653 0.74338 0.90635 0.84989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 113.37 1.23 1.22 16 2 O -0.40 -2.13 10.63 -148.98 -1.58 -3.71 16 3 C 0.06 -0.05 4.38 31.12 0.14 0.09 16 4 H 0.10 -0.58 7.87 -2.39 -0.02 -0.60 16 5 C -0.17 -0.04 7.71 31.12 0.24 0.20 16 6 C 0.12 0.28 4.17 45.52 0.19 0.47 16 7 H 0.08 0.87 7.46 -2.39 -0.02 0.85 16 8 N -0.71 1.53 5.35 -440.05 -2.36 -0.83 16 9 C 0.51 2.21 7.82 87.66 0.69 2.90 16 10 O -0.58 -10.11 15.63 -3.02 -0.05 -10.16 16 11 C -0.06 0.21 6.24 29.10 0.18 0.39 16 12 C 0.03 0.17 5.66 41.08 0.23 0.41 16 13 C -0.20 -1.66 10.76 22.14 0.24 -1.42 16 14 C -0.21 -1.78 9.37 22.14 0.21 -1.58 16 15 C 0.02 0.13 6.53 41.08 0.27 0.40 16 16 C -0.07 -0.17 3.07 71.24 0.22 0.05 16 17 O -0.57 -3.42 12.86 -148.98 -1.92 -5.34 16 18 Si 0.79 0.72 30.60 68.60 2.10 2.82 16 19 N -0.54 -2.88 6.07 -171.11 -1.04 -3.92 16 20 C -0.13 0.43 7.66 31.12 0.24 0.67 16 21 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 22 H 0.09 -0.11 8.14 -2.39 -0.02 -0.13 16 23 H 0.06 -0.22 8.14 -2.38 -0.02 -0.24 16 24 H 0.12 -0.57 8.14 -2.39 -0.02 -0.59 16 25 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 26 H 0.42 -4.55 8.73 -92.70 -0.81 -5.36 16 27 H 0.15 -1.38 8.14 -2.39 -0.02 -1.40 16 28 H 0.13 -1.32 8.14 -2.38 -0.02 -1.34 16 29 H 0.14 0.81 8.06 -2.91 -0.02 0.78 16 30 H 0.15 0.85 6.24 -2.91 -0.02 0.83 16 31 H 0.10 -0.29 7.96 -2.39 -0.02 -0.31 16 32 H 0.40 -1.20 8.74 -74.06 -0.65 -1.85 16 33 H -0.28 -0.87 7.11 99.48 0.71 -0.16 16 34 H -0.31 -3.17 7.11 99.48 0.71 -2.46 16 35 H 0.42 0.43 8.96 -92.71 -0.83 -0.40 16 36 H 0.07 -0.05 8.14 -2.38 -0.02 -0.07 16 37 H 0.13 -1.34 8.12 -2.39 -0.02 -1.36 16 Total: 0.00 -29.05 316.87 -1.92 -30.97 By element: Atomic # 1 Polarization: -12.46 SS G_CDS: -1.15 Total: -13.61 kcal Atomic # 6 Polarization: -0.28 SS G_CDS: 4.07 Total: 3.78 kcal Atomic # 7 Polarization: -1.36 SS G_CDS: -3.40 Total: -4.75 kcal Atomic # 8 Polarization: -15.66 SS G_CDS: -3.55 Total: -19.21 kcal Atomic # 14 Polarization: 0.72 SS G_CDS: 2.10 Total: 2.82 kcal Total: -29.05 -1.92 -30.97 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_14644196.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.125 kcal (2) G-P(sol) polarization free energy of solvation -29.048 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.173 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.922 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.970 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds